BLASTX nr result

ID: Cimicifuga21_contig00002728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002728
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]    69   7e-28
ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|2...    71   5e-23
ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...    69   4e-22
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...    72   4e-22
gb|AFW57164.1| hypothetical protein ZEAMMB73_924221 [Zea mays]         58   2e-21

>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score = 68.9 bits (167), Expect(3) = 7e-28
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = +1

Query: 1   IVWDNLEDPLNQTVKQVHLIFDLFLDIQSTLSLPQNSEKTMCFLKLTTSDLL 156
           I+W+NLEDPL+QTVKQVHLIFDLFLDIQS+L   +++E+   FL    +DLL
Sbjct: 373 IIWNNLEDPLSQTVKQVHLIFDLFLDIQSSLHWAEDNERIKPFLCRIATDLL 424



 Score = 60.5 bits (145), Expect(3) = 7e-28
 Identities = 25/39 (64%), Positives = 34/39 (87%)
 Frame = +2

Query: 206 EKVGATTVLNMSPDLLFEAIYAYIDDAICCAATTFLEMF 322
           +++GA T+L MSPDLLFE ++AYIDD +CCAAT+FL+ F
Sbjct: 442 KRLGAKTLLGMSPDLLFETVHAYIDDDVCCAATSFLKCF 480



 Score = 39.7 bits (91), Expect(3) = 7e-28
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 159 LGPCCKGRYVPLASLMKRLGQR 224
           +GP CKGRYVPLASL KRLG +
Sbjct: 426 MGPRCKGRYVPLASLTKRLGAK 447


>ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|222848947|gb|EEE86494.1|
           predicted protein [Populus trichocarpa]
          Length = 2134

 Score = 70.9 bits (172), Expect(2) = 5e-23
 Identities = 34/52 (65%), Positives = 42/52 (80%)
 Frame = +1

Query: 1   IVWDNLEDPLNQTVKQVHLIFDLFLDIQSTLSLPQNSEKTMCFLKLTTSDLL 156
           I+W++LEDPL+QTVKQVHLIFDLFLDIQS+L   + SE+   FL+   SDLL
Sbjct: 386 IIWNSLEDPLSQTVKQVHLIFDLFLDIQSSLHWGEGSERIKSFLQKIASDLL 437



 Score = 61.6 bits (148), Expect(2) = 5e-23
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = +2

Query: 206 EKVGATTVLNMSPDLLFEAIYAYIDDAICCAATTFLEMF 322
           +++GA T+L+MSPDLLFE + AYIDD +CCAATTFL+ F
Sbjct: 455 KRLGAKTILDMSPDLLFEIVQAYIDDDVCCAATTFLKCF 493


>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
           vinifera]
          Length = 2223

 Score = 68.9 bits (167), Expect(2) = 4e-22
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = +1

Query: 1   IVWDNLEDPLNQTVKQVHLIFDLFLDIQSTLSLPQNSEKTMCFLKLTTSDLL 156
           I+W+NLEDPL+QTVKQVHLIFDLFLDIQS+L   +++E+   FL    +DLL
Sbjct: 423 IIWNNLEDPLSQTVKQVHLIFDLFLDIQSSLHWAEDNERIKPFLCRIATDLL 474



 Score = 60.5 bits (145), Expect(2) = 4e-22
 Identities = 25/39 (64%), Positives = 34/39 (87%)
 Frame = +2

Query: 206 EKVGATTVLNMSPDLLFEAIYAYIDDAICCAATTFLEMF 322
           +++GA T+L MSPDLLFE ++AYIDD +CCAAT+FL+ F
Sbjct: 492 KRLGAKTLLGMSPDLLFETVHAYIDDDVCCAATSFLKCF 530


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
           gi|223543500|gb|EEF45031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2190

 Score = 72.4 bits (176), Expect(2) = 4e-22
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +1

Query: 1   IVWDNLEDPLNQTVKQVHLIFDLFLDIQSTLSLPQNSEKTMCFLKLTTSDLL 156
           I+W+NLEDPL+QTVKQVH +FDLFLDIQSTL L   S+K   FL+   SDLL
Sbjct: 404 IIWNNLEDPLSQTVKQVHQVFDLFLDIQSTLRLGVGSQKIKSFLEKIASDLL 455



 Score = 57.0 bits (136), Expect(2) = 4e-22
 Identities = 26/55 (47%), Positives = 37/55 (67%)
 Frame = +2

Query: 158 LRSMLQGQIRSFSFSYEKVGATTVLNMSPDLLFEAIYAYIDDAICCAATTFLEMF 322
           L S  +G+    +   +++G  ++L M PDLLFE + AYIDD +CCAATTFL+ F
Sbjct: 457 LGSRCKGRYIPLALLTKRLGPKSMLEMCPDLLFETVQAYIDDDVCCAATTFLKCF 511


>gb|AFW57164.1| hypothetical protein ZEAMMB73_924221 [Zea mays]
          Length = 2194

 Score = 57.8 bits (138), Expect(3) = 2e-21
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = +1

Query: 1   IVWDNLEDPLNQTVKQVHLIFDLFLDIQSTLSLPQNSEKTMCFLKLTTSDLL 156
           I+W NLEDPL+QTVKQVHLIFDL LDI+  ++          FL    +DLL
Sbjct: 407 IIWRNLEDPLSQTVKQVHLIFDLLLDIELCIASEDREHNNNLFLCNVANDLL 458



 Score = 48.9 bits (115), Expect(3) = 2e-21
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +2

Query: 206 EKVGATTVLNMSPDLLFEAIYAYIDDAICCAATTFLEMFPRVF-A*CW 346
           +++GA ++L +  +LL E  YAYIDD +CCA TTFL+ F       CW
Sbjct: 476 KRLGAKSLLTLKSNLLSETAYAYIDDDVCCAVTTFLKSFLETLRGECW 523



 Score = 40.4 bits (93), Expect(3) = 2e-21
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 159 LGPCCKGRYVPLASLMKRLGQR 224
           LGP CKGRYVPLASL KRLG +
Sbjct: 460 LGPRCKGRYVPLASLTKRLGAK 481


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