BLASTX nr result

ID: Cimicifuga21_contig00002721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002721
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48563.1| unknown [Medicago truncatula]                          162   2e-37
ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854...   155   2e-35
ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi...   151   3e-34
ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi...   151   3e-34
ref|XP_002514869.1| hypothetical protein RCOM_1078910 [Ricinus c...   151   4e-34

>gb|AFK48563.1| unknown [Medicago truncatula]
          Length = 162

 Score =  162 bits (409), Expect = 2e-37
 Identities = 83/159 (52%), Positives = 105/159 (66%)
 Frame = +2

Query: 476 KMGMGKTKKIGLIHKTWDRCRSLGSGSGVKKFSKTPIAFVSKPKSWPCSPESPEEDKRKM 655
           K G G  KKIGLI KTW+RC+S+G G   K +S +      + KSWP  P   EE++RK 
Sbjct: 8   KQGKGN-KKIGLITKTWERCKSIGGGHKSKSYSSSVTPTTRRSKSWPGLPRG-EENRRK- 64

Query: 656 KRRVVPEGCFSVYVGPQRQRFVIKTSCINHPLFKXXXXXXXXXFGYNSEGPLVLPCDVDI 835
             +V PEGCFSVYVGPQ QRFVIKT   NHPLFK         +GY+ +GPL LPC+VD+
Sbjct: 65  --KVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDV 122

Query: 836 FYKVLSEMDGDEIRPGCAFSKGYGSSYNLVSPSRLVSID 952
           FYKVL EMD +    GC F +   SSY+L+SPSR++ ++
Sbjct: 123 FYKVLMEMDNEAPLQGCTFGRS-RSSYHLLSPSRMIVLN 160


>ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854260 [Vitis vinifera]
          Length = 153

 Score =  155 bits (391), Expect = 2e-35
 Identities = 80/156 (51%), Positives = 102/156 (65%), Gaps = 6/156 (3%)
 Frame = +2

Query: 503 IGLIHKTWDRCRSLGSGSGVKKFSKTPIAFVSKPKSWP-----CSPESPEEDKRKMKRRV 667
           +GLI KTW+RC+S   G   +   + P     K KSWP      +  S E+DKR  K RV
Sbjct: 1   MGLIKKTWNRCKSFSHGRSSENIPRAP----KKSKSWPRITAAAAAASLEDDKRVKKGRV 56

Query: 668 VPEGCFSVYVGPQRQRFVIKTSCINHPLFKXXXXXXXXXFGYNSEGPLVLPCDVDIFYKV 847
            PEGCFSVYVGP++QRFVIKT   NHPLFK         +GYNSEGPL LPC+V+IF+KV
Sbjct: 57  APEGCFSVYVGPEKQRFVIKTEYANHPLFKILLEEAELEYGYNSEGPLALPCNVEIFHKV 116

Query: 848 LSEMD-GDEIRPGCAFSKGYGSSYNLVSPSRLVSID 952
           L EMD  D+I  GC F + + SSY L+SPS +++++
Sbjct: 117 LLEMDSSDKIHQGCTFPRSH-SSYRLLSPSPMIAMN 151


>ref|XP_002299329.1| SAUR family protein [Populus trichocarpa]
           gi|222846587|gb|EEE84134.1| SAUR family protein [Populus
           trichocarpa]
          Length = 160

 Score =  151 bits (382), Expect = 3e-34
 Identities = 84/158 (53%), Positives = 105/158 (66%), Gaps = 7/158 (4%)
 Frame = +2

Query: 482 GMGKTKKIGLIHKTWDRCRSLGSGSGVKKFSKTPIAFVSKPKSWPCSPESPEED---KRK 652
           G GKT+   LI KTW+RC+S+G GS  K+ S+   +   K KS+P    S E+D   K  
Sbjct: 6   GKGKTEG-NLIIKTWERCKSIGRGS--KRTSRLVRSLTPKSKSYPHIKVSLEDDHDRKHS 62

Query: 653 MKRRVVPEGCFSVYVGPQRQRFVIKTSCINHPLFKXXXXXXXXXFGYNSEGPLVLPCDVD 832
            +RRV PEGCFSVYVGPQ+QRFVIKT   NHPLFK         +GY+SEGPL LPC+VD
Sbjct: 63  RQRRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKMLLEEAESEYGYSSEGPLTLPCNVD 122

Query: 833 IFYKVLSEMD----GDEIRPGCAFSKGYGSSYNLVSPS 934
           IFY+VL  ++     D+I  GC F+K YG SY+L+SPS
Sbjct: 123 IFYRVLMAVEDTNIDDKIHLGCGFAKNYG-SYHLLSPS 159


>ref|XP_002303770.1| SAUR family protein [Populus trichocarpa]
           gi|222841202|gb|EEE78749.1| SAUR family protein [Populus
           trichocarpa]
          Length = 167

 Score =  151 bits (382), Expect = 3e-34
 Identities = 86/164 (52%), Positives = 105/164 (64%), Gaps = 7/164 (4%)
 Frame = +2

Query: 482 GMGKTKKIGLIHKTWDRCRSLGSGSGVKKFSKTPIAFVSKPKSWPCSPESPEED---KRK 652
           G GK K   LI KTW+RC S G GS  K+ S+   +   K KS P    S E+D   K  
Sbjct: 6   GKGKFKG-NLIIKTWERCISFGRGS--KRTSRLERSLTPKSKSCPHIKVSLEDDHDQKHS 62

Query: 653 MKRRVVPEGCFSVYVGPQRQRFVIKTSCINHPLFKXXXXXXXXXFGYNSEGPLVLPCDVD 832
            K RV PEGCFSVYVGPQ+QRFVIKT   NHPLFK         +GYN EGPL LPC+VD
Sbjct: 63  RKSRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKILLEEAESEYGYNPEGPLTLPCNVD 122

Query: 833 IFYKVLSEMD----GDEIRPGCAFSKGYGSSYNLVSPSRLVSID 952
           IFYKVL  M+     ++I  GC+F+K YG SY+L+SPSR++ ++
Sbjct: 123 IFYKVLMAMEDTGIDNKIHRGCSFAKNYG-SYHLLSPSRMIVLN 165


>ref|XP_002514869.1| hypothetical protein RCOM_1078910 [Ricinus communis]
           gi|223545920|gb|EEF47423.1| hypothetical protein
           RCOM_1078910 [Ricinus communis]
          Length = 174

 Score =  151 bits (381), Expect = 4e-34
 Identities = 86/169 (50%), Positives = 105/169 (62%), Gaps = 15/169 (8%)
 Frame = +2

Query: 491 KTKKIGLIHKTWDRCRSLGSGSGVKKFSKTPIAFVSKPKSWP---CSPESPEEDKRKM-- 655
           K KK  LI KTW+RC+SLG GS  K+ S+   + ++K KS P     P   ++D+R    
Sbjct: 7   KRKKGNLIIKTWERCKSLGRGS--KRTSRLVGSLITKSKSLPHLHIHPSIGDDDQRSSSS 64

Query: 656 ---KRRVVPEGCFSVYVGPQRQRFVIKTSCINHPLFKXXXXXXXXXFGYNSEGPLVLPCD 826
              KRRV PEGCFSVYVGP++QRFVIKT   NHPLFK         +GYN EGPL LPC+
Sbjct: 65  SSRKRRVAPEGCFSVYVGPEKQRFVIKTEYANHPLFKVLLEEAESEYGYNPEGPLALPCN 124

Query: 827 VDIFYKVLSEMDGDE-------IRPGCAFSKGYGSSYNLVSPSRLVSID 952
           VDIF KVL  MD  +        R GC FSK YG SY L+SPSR  +++
Sbjct: 125 VDIFCKVLVAMDSSDDEAIHPHRRQGCGFSKNYG-SYRLLSPSRTTALN 172


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