BLASTX nr result

ID: Cimicifuga21_contig00002720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002720
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97107.2| Lysosomal Cystine Transporter family protein, exp...   414   e-113
ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   407   e-111
ref|XP_003547683.1| PREDICTED: cystinosin homolog [Glycine max]       407   e-111
dbj|BAJ94286.1| predicted protein [Hordeum vulgare subsp. vulgar...   405   e-110
ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis l...   405   e-110

>gb|ABA97107.2| Lysosomal Cystine Transporter family protein, expressed [Oryza sativa
            Japonica Group] gi|215695525|dbj|BAG90716.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 274

 Score =  414 bits (1063), Expect = e-113
 Identities = 196/274 (71%), Positives = 227/274 (82%)
 Frame = -3

Query: 1094 MSSWNSLPLEISYQVLGWIAFFSWSFSFYPQAILNFRRKSVVGLNFDFLVLNLTKHSSYL 915
            MSSWNS+ +E+ YQVLGW+AFF+WSFSFYPQ  LNF+RKSVVGLNFDFLVLNLTKHSSYL
Sbjct: 1    MSSWNSVGMEVLYQVLGWVAFFAWSFSFYPQVFLNFKRKSVVGLNFDFLVLNLTKHSSYL 60

Query: 914  IYNAVLFFSSTVQRQYHEKYGFNEMIPVAVNDVAFSIHATLLTAFTLFQVFIYERGSQKV 735
            IYNA LFFS  +QRQYHE YG  EMIPVA NDVAFS+HA  LTAFTLFQVFIYERG+QK+
Sbjct: 61   IYNAALFFSPFIQRQYHETYGDKEMIPVAANDVAFSVHAVALTAFTLFQVFIYERGNQKI 120

Query: 734  SKISFAITFAVWGSAAVCIFVAWPSKSWLWLISVFNTIQVIMTVIKYIPQAILNFTRKST 555
            SK+  +IT  VW +A VC+ VAWP  +WLWLI VFN+IQV MT IKYIPQAI+NF RKST
Sbjct: 121  SKVCISITAIVWTAAIVCLIVAWPKSNWLWLIDVFNSIQVGMTAIKYIPQAIMNFRRKST 180

Query: 554  VGWSIGNILLDLTGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 375
            +GWSIGNILLDLTGGV N+GQM +QSIDQ + VNFYGNIGKTLLSL  +FFD+LFI+QHY
Sbjct: 181  IGWSIGNILLDLTGGVLNFGQMGVQSIDQHTLVNFYGNIGKTLLSLEVVFFDILFIIQHY 240

Query: 374  VLYPTKKEKISTEDNDEHTAPLVKSSHPSQSDNV 273
            VLYP K+++       E  APL++ S   + D+V
Sbjct: 241  VLYPVKRDENGKAIISERVAPLIRPSDKPEEDSV 274


>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
            unknown [Populus trichocarpa] gi|222867000|gb|EEF04131.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  407 bits (1047), Expect = e-111
 Identities = 201/275 (73%), Positives = 227/275 (82%), Gaps = 1/275 (0%)
 Frame = -3

Query: 1094 MSSWNSLPLEISYQVLGWIAFFSWSFSFYPQAILNFRRKSVVGLNFDFLVLNLTKHSSYL 915
            M+SWNS+PLEI+Y+  GWIAFFSWS SFYPQ I+NFRRKSVVGLNFDF+VLNLTKHSSYL
Sbjct: 1    MASWNSIPLEITYETFGWIAFFSWSISFYPQVIMNFRRKSVVGLNFDFVVLNLTKHSSYL 60

Query: 914  IYNAVLFFSSTVQRQYHEKYGFNEMIPVAVNDVAFSIHATLLTAFTLFQVFIYERGSQKV 735
            IYNA L+FSS +Q QY EKYG  EMIPVA NDVAFSIHA LLTA TLFQ+ IY+RG+QKV
Sbjct: 61   IYNASLYFSSAIQHQYFEKYGHGEMIPVAANDVAFSIHAVLLTAITLFQIVIYDRGNQKV 120

Query: 734  SKISFAITFAVWGSAAVCIFVAWPSKSWLWLISVFNTIQVIMTVIKYIPQAILNFTRKST 555
            SKIS A    VW  AAVC F+A PS SWLWLIS+FN+IQV MTVIKYIPQ I+NF RKST
Sbjct: 121  SKISIATVCVVWLVAAVCFFIALPSHSWLWLISIFNSIQVFMTVIKYIPQVIMNFMRKST 180

Query: 554  VGWSIGNILLDLTGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 375
             G+SIGNILLD  GGVTNY QMA+QSIDQ SWVNFYGNIGKTLLSLVSIFFDL+F+ QHY
Sbjct: 181  DGFSIGNILLDCLGGVTNYAQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHY 240

Query: 374  VLYPTKKEKISTEDNDEHTAPLVK-SSHPSQSDNV 273
            +LYP  K  +  + N E T PL++ S  P+  +NV
Sbjct: 241  ILYPENK-AVPPKLNKEGTEPLIRFSEEPAAPENV 274


>ref|XP_003547683.1| PREDICTED: cystinosin homolog [Glycine max]
          Length = 277

 Score =  407 bits (1046), Expect = e-111
 Identities = 196/277 (70%), Positives = 227/277 (81%), Gaps = 3/277 (1%)
 Frame = -3

Query: 1094 MSSWNSLPLEISYQVLGWIAFFSWSFSFYPQAILNFRRKSVVGLNFDFLVLNLTKHSSYL 915
            M+SWNS PL+++Y+ LGW AF SWS SFYPQ ILNFRRKSVVGLNFDF+VLNLTKHSSYL
Sbjct: 1    MASWNSFPLQVTYEALGWFAFVSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYL 60

Query: 914  IYNAVLFFSSTVQRQYHEKYGFNEMIPVAVNDVAFSIHATLLTAFTLFQVFIYERGSQKV 735
            IYNA L+FSS +Q+QY EKYG+ EMIPVA NDVAFSIHA LLTA TLFQ+ IYERGSQKV
Sbjct: 61   IYNASLYFSSAIQKQYFEKYGYGEMIPVAANDVAFSIHAVLLTAITLFQIAIYERGSQKV 120

Query: 734  SKISFAITFAVWGSAAVCIFVAWPSKSWLWLISVFNTIQVIMTVIKYIPQAILNFTRKST 555
            SK+S  I    W  AAVC F+A P+ SWLWL+SVFNTIQV+MT IKYIPQA++NF RKST
Sbjct: 121  SKVSIGIVSVAWLVAAVCFFIALPNNSWLWLLSVFNTIQVVMTTIKYIPQAVMNFLRKST 180

Query: 554  VGWSIGNILLDLTGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 375
             G+SIGNILLD +GG+ NYGQM +QSIDQ SWVNFYGNIGK LLSLVS+FFD++FI+QHY
Sbjct: 181  DGFSIGNILLDFSGGIANYGQMVVQSIDQDSWVNFYGNIGKVLLSLVSVFFDIIFIIQHY 240

Query: 374  VLYPTKKE---KISTEDNDEHTAPLVKSSHPSQSDNV 273
            VLY  KK    +I+TE  D+    LV+ S  S  +NV
Sbjct: 241  VLYRGKKSSKLEITTEQEDQIREHLVRHSDQSSPENV 277


>dbj|BAJ94286.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326508494|dbj|BAJ95769.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 275

 Score =  405 bits (1041), Expect = e-110
 Identities = 189/273 (69%), Positives = 225/273 (82%)
 Frame = -3

Query: 1091 SSWNSLPLEISYQVLGWIAFFSWSFSFYPQAILNFRRKSVVGLNFDFLVLNLTKHSSYLI 912
            SSWNS+ L + YQV+GW+AFF+WSFSFYPQ +LN+RRKSVVGLNFDFLVLN TKHSSYLI
Sbjct: 3    SSWNSVGLGVLYQVIGWVAFFAWSFSFYPQVVLNYRRKSVVGLNFDFLVLNFTKHSSYLI 62

Query: 911  YNAVLFFSSTVQRQYHEKYGFNEMIPVAVNDVAFSIHATLLTAFTLFQVFIYERGSQKVS 732
            YNA LFFS  +Q+QYH+K+G  EMIPVA NDVAFS+HA  LT+FTL+QVFIYERG QKVS
Sbjct: 63   YNAALFFSPFIQKQYHDKFGDKEMIPVAANDVAFSLHAVALTSFTLYQVFIYERGQQKVS 122

Query: 731  KISFAITFAVWGSAAVCIFVAWPSKSWLWLISVFNTIQVIMTVIKYIPQAILNFTRKSTV 552
            K+  +IT  VW +A VC+ VAWP   WLWLI VFN+IQV MT +KYIPQA++NF RKSTV
Sbjct: 123  KVCISITAVVWSAAIVCLIVAWPKSDWLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTV 182

Query: 551  GWSIGNILLDLTGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYV 372
            GWSIGNILLDLTGGV N+GQM +Q+IDQ + VNFYGNIGKTLLSL ++FFDLLFI+QHYV
Sbjct: 183  GWSIGNILLDLTGGVLNFGQMGVQAIDQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYV 242

Query: 371  LYPTKKEKISTEDNDEHTAPLVKSSHPSQSDNV 273
            LYP K+++       E  APL++ S   + D+V
Sbjct: 243  LYPVKRDENGKAIISERIAPLIRPSDKPEEDSV 275


>ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316523|gb|EFH46946.1| PQ-loop repeat family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  405 bits (1041), Expect = e-110
 Identities = 189/267 (70%), Positives = 221/267 (82%)
 Frame = -3

Query: 1094 MSSWNSLPLEISYQVLGWIAFFSWSFSFYPQAILNFRRKSVVGLNFDFLVLNLTKHSSYL 915
            M+SWNS+PLEISY+++GWIAF SWS SFYPQ ILNFRRKSVVGLNFDF++LNLTKHSSY+
Sbjct: 1    MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRKSVVGLNFDFVMLNLTKHSSYM 60

Query: 914  IYNAVLFFSSTVQRQYHEKYGFNEMIPVAVNDVAFSIHATLLTAFTLFQVFIYERGSQKV 735
            IYN  L+FS  +Q+QY + YG  EMIPVA NDVAFSIHA ++TA TLFQ+FIYERG QKV
Sbjct: 61   IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTALTLFQIFIYERGPQKV 120

Query: 734  SKISFAITFAVWGSAAVCIFVAWPSKSWLWLISVFNTIQVIMTVIKYIPQAILNFTRKST 555
            S+++  I   VW  AA+C F+A P+ SWLWLIS+FN+IQV MT +KYIPQA +NFTRKST
Sbjct: 121  SRLAIGIVVVVWAFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 554  VGWSIGNILLDLTGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 375
            VGWSIGNILLD TGG+ NY QM +QSIDQ SW NFYGNIGKTLLSL+SIFFD+LF+ QHY
Sbjct: 181  VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMFQHY 240

Query: 374  VLYPTKKEKISTEDNDEHTAPLVKSSH 294
            VLYP KK   S E  +E   PL+ SSH
Sbjct: 241  VLYPEKKASKSLETGEESNEPLIDSSH 267


Top