BLASTX nr result

ID: Cimicifuga21_contig00002682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002682
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250...   316   6e-84
gb|AFK35215.1| unknown [Lotus japonicus]                              312   8e-83
ref|XP_002533330.1| conserved hypothetical protein [Ricinus comm...   308   9e-82
gb|ABK95718.1| unknown [Populus trichocarpa]                          301   1e-79
ref|XP_003554777.1| PREDICTED: uncharacterized protein LOC100798...   301   1e-79

>ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250645 [Vitis vinifera]
           gi|296088978|emb|CBI38681.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  316 bits (809), Expect = 6e-84
 Identities = 166/273 (60%), Positives = 191/273 (69%), Gaps = 6/273 (2%)
 Frame = +3

Query: 60  MATPLGLLNVRILPQKPLQTLSELPNLSHPTKTHLTKHSNNPTQPFQQLAIQ---HXXXX 230
           MAT L LL + I+ QK  QT S+L N  +P ++ +++HS +P +   +   +        
Sbjct: 1   MATTLSLLRLSIVSQKSHQTHSKLVNRPNPVRSVISQHSLDPQRLLSETTHRLKSAALPL 60

Query: 231 XXXXXXXXXXXQDALAVGGEFGLLEGRTFALIHPIVLGSLFFYTLYAGYLGWQWRRVRTI 410
                      +DALAVGGEFG+LEGRT ALIHPIV+GSLFFYTL+AGYLGWQWRRVRTI
Sbjct: 61  TALTLPFLLDSKDALAVGGEFGILEGRTLALIHPIVMGSLFFYTLWAGYLGWQWRRVRTI 120

Query: 411 QNEINELKKQVKPAPALPEGSPPV---PLSPIETKIQQLTEERKELLKGSYKDKHFNAGS 581
           QNEINELKKQV+P    PEGSPP    P SPIE KIQQLTEERKEL+KGS++D+HFNAGS
Sbjct: 121 QNEINELKKQVRPVAVTPEGSPPAEAPPPSPIEAKIQQLTEERKELIKGSFRDRHFNAGS 180

Query: 582 ILLXXXXXXXXXXXXNTWMRTGKLFPGPHLFGGXXXXXXXXXXXXLVPSMQKGNETARNL 761
           ILL            NTW RTGKLFPGPHLF G            LVP+MQKGNETARNL
Sbjct: 181 ILLGFGVFESIGGGVNTWFRTGKLFPGPHLFAGAAITALWAAAAALVPAMQKGNETARNL 240

Query: 762 HIALNVLNVLLFACQIPTGLEIVLKVFEFTKWP 860
           HIALN LNVLLF  QIPTG++IV KVFEFT WP
Sbjct: 241 HIALNGLNVLLFIWQIPTGIDIVFKVFEFTNWP 273


>gb|AFK35215.1| unknown [Lotus japonicus]
          Length = 273

 Score =  312 bits (799), Expect = 8e-83
 Identities = 169/273 (61%), Positives = 188/273 (68%), Gaps = 6/273 (2%)
 Frame = +3

Query: 60  MATPLGLLNVRILPQKPLQTLSELPNLSH-PTKTHLTKHSNNPTQPFQQLA---IQHXXX 227
           MA  L LL + ILP KP Q+ S+L  + +   K    K   NP +   Q A   ++H   
Sbjct: 1   MAATLSLLKLPILPNKPRQSTSKLVPIPYISAKLDTPKDFPNPQKLLDQNANALLKHASL 60

Query: 228 XXXXXXXXXXXX-QDALAVGGEFGLLEGRTFALIHPIVLGSLFFYTLYAGYLGWQWRRVR 404
                        +DALAVGGEFG+LEGRTFALIHPIVLG LFFYTLYAGYLGWQWRRVR
Sbjct: 61  SLTAVTFPFLLEPKDALAVGGEFGILEGRTFALIHPIVLGGLFFYTLYAGYLGWQWRRVR 120

Query: 405 TIQNEINELKKQVKPAPALPEGSP-PVPLSPIETKIQQLTEERKELLKGSYKDKHFNAGS 581
           T QNEINELKKQ+KPAP  P+G P     SP+E KIQQLTEERKEL+KGSY++KHFNAGS
Sbjct: 121 TTQNEINELKKQIKPAPVTPDGKPVETAPSPVELKIQQLTEERKELIKGSYREKHFNAGS 180

Query: 582 ILLXXXXXXXXXXXXNTWMRTGKLFPGPHLFGGXXXXXXXXXXXXLVPSMQKGNETARNL 761
           ILL            +TW+RTGKLFPGPHLF G            LVP MQKG+ETARNL
Sbjct: 181 ILLGFGVFEAVGGGLDTWLRTGKLFPGPHLFAGAGITVLWALAAALVPPMQKGSETARNL 240

Query: 762 HIALNVLNVLLFACQIPTGLEIVLKVFEFTKWP 860
           HIALN LNVLLF  QIPTGLEIVLKVFEFTKWP
Sbjct: 241 HIALNTLNVLLFIWQIPTGLEIVLKVFEFTKWP 273


>ref|XP_002533330.1| conserved hypothetical protein [Ricinus communis]
           gi|223526835|gb|EEF29051.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score =  308 bits (790), Expect = 9e-82
 Identities = 164/270 (60%), Positives = 184/270 (68%), Gaps = 3/270 (1%)
 Frame = +3

Query: 60  MATPLGLLNVRILPQKPLQTLSELPNLSHPTKTHLTKHSNNP--TQPFQQLAIQHXXXXX 233
           MAT L LL   +L +K     S+ P+L  P+K  L+K  ++    +   QL         
Sbjct: 1   MATTLTLLRSPVLARKLPYIHSKFPSLPKPSKLDLSKKESSKLLNENIHQLISSASLPIT 60

Query: 234 XXXXXXXXXXQDALAVGGEFGLLEGRTFALIHPIVLGSLFFYTLYAGYLGWQWRRVRTIQ 413
                     +DA AVGGEFG+LEG+TFALIHP V+G LFFYTL+AGYLGWQWRRVRTIQ
Sbjct: 61  AFSLPLFLDAKDAFAVGGEFGILEGKTFALIHPAVMGLLFFYTLWAGYLGWQWRRVRTIQ 120

Query: 414 NEINELKKQVKPAPALPEGSP-PVPLSPIETKIQQLTEERKELLKGSYKDKHFNAGSILL 590
           NEI+ELKKQVKPA   P+G P   P SP+E KIQQLTEERKEL+KGSYKD+HFNAGSILL
Sbjct: 121 NEISELKKQVKPAAVTPDGKPVEAPPSPVELKIQQLTEERKELIKGSYKDRHFNAGSILL 180

Query: 591 XXXXXXXXXXXXNTWMRTGKLFPGPHLFGGXXXXXXXXXXXXLVPSMQKGNETARNLHIA 770
                       NTW RTGKLFPGPHLF G            LVP+MQKGNETARNLHIA
Sbjct: 181 GFGVLESIGGGLNTWFRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARNLHIA 240

Query: 771 LNVLNVLLFACQIPTGLEIVLKVFEFTKWP 860
           LN LNVLLF  QIPTG EIVLKVFEFTKWP
Sbjct: 241 LNALNVLLFIWQIPTGFEIVLKVFEFTKWP 270


>gb|ABK95718.1| unknown [Populus trichocarpa]
          Length = 274

 Score =  301 bits (772), Expect = 1e-79
 Identities = 160/274 (58%), Positives = 188/274 (68%), Gaps = 7/274 (2%)
 Frame = +3

Query: 60  MATPLGLLNVRILPQKPLQTL--SELPNLSHPTKTHLTKHSNNPTQPFQQLAIQHXXXXX 233
           MAT LGLLN  IL QK       S++P LS+ +K  + K  ++  +      IQH     
Sbjct: 1   MATTLGLLNFPILAQKNNTPFIHSKMPLLSNSSKLDVCKKDSHSPRKLFTETIQHLSSAS 60

Query: 234 XXXXXXXXXX----QDALAVGGEFGLLEGRTFALIHPIVLGSLFFYTLYAGYLGWQWRRV 401
                         +DALAVGGEFG+LEGR+FALIHPIV+G L FYTL+AGYLGWQWRRV
Sbjct: 61  LSPASLALPFLLDTKDALAVGGEFGILEGRSFALIHPIVMGGLLFYTLWAGYLGWQWRRV 120

Query: 402 RTIQNEINELKKQVKPAPALPEGSP-PVPLSPIETKIQQLTEERKELLKGSYKDKHFNAG 578
           RT QNEI+ELK+QVKP P  PEG+P     SP+E KIQQL+EERKEL+KGSY+D+HFNAG
Sbjct: 121 RTTQNEISELKRQVKPTPVTPEGTPVEAAPSPVELKIQQLSEERKELIKGSYRDRHFNAG 180

Query: 579 SILLXXXXXXXXXXXXNTWMRTGKLFPGPHLFGGXXXXXXXXXXXXLVPSMQKGNETARN 758
           SILL            NTW+RTGKLFPGPHLF G            LVP+MQKGNETAR+
Sbjct: 181 SILLGFGVFEAIGGGVNTWLRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARS 240

Query: 759 LHIALNVLNVLLFACQIPTGLEIVLKVFEFTKWP 860
           LHIALN +NV+LF  QIPTG++IV KVFEFTKWP
Sbjct: 241 LHIALNAINVVLFLWQIPTGIDIVFKVFEFTKWP 274


>ref|XP_003554777.1| PREDICTED: uncharacterized protein LOC100798854 [Glycine max]
          Length = 277

 Score =  301 bits (771), Expect = 1e-79
 Identities = 164/277 (59%), Positives = 183/277 (66%), Gaps = 10/277 (3%)
 Frame = +3

Query: 60  MATPLGLLNVRILPQKPL----QTLSELPNLSHPTKTHLTKHSNNPTQPFQQLAIQHXXX 227
           MA  L LL + ILP KPL     T   +P  S  +K ++ K SN    PF    I     
Sbjct: 1   MAATLTLLKLPILPNKPLLPRPSTSKLVPFPSIYSKLNIPKDSNPQNLPFLDQNIDALKP 60

Query: 228 XXXXXXXXXXXX----QDALAVGGEFGLLEGRTFALIHPIVLGSLFFYTLYAGYLGWQWR 395
                           +DALAVGGEFG+LEGR+FALIHPIV+GS F YTL+AGYLGWQWR
Sbjct: 61  VFLSLSAISFPLLLETKDALAVGGEFGILEGRSFALIHPIVMGSFFLYTLWAGYLGWQWR 120

Query: 396 RVRTIQNEINELKKQVKPAPALPEGSP--PVPLSPIETKIQQLTEERKELLKGSYKDKHF 569
           RVRTIQN+INELKKQVKP P  P+G P      SP+E +IQQLTEERKEL+KGSYKD+HF
Sbjct: 121 RVRTIQNDINELKKQVKPNPVTPDGKPVEEAAPSPVELQIQQLTEERKELIKGSYKDRHF 180

Query: 570 NAGSILLXXXXXXXXXXXXNTWMRTGKLFPGPHLFGGXXXXXXXXXXXXLVPSMQKGNET 749
           NAGSILL            NTW RTGKLFPGPHLF G            LVPSMQKGNET
Sbjct: 181 NAGSILLGFGVLESVGGGVNTWFRTGKLFPGPHLFAGAAITALWALAAALVPSMQKGNET 240

Query: 750 ARNLHIALNVLNVLLFACQIPTGLEIVLKVFEFTKWP 860
           ARNLHIALN +NVLLF  QIPTG++IV KVFEFT WP
Sbjct: 241 ARNLHIALNAVNVLLFVWQIPTGIDIVFKVFEFTTWP 277


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