BLASTX nr result

ID: Cimicifuga21_contig00002525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002525
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275915.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   293   4e-77
ref|XP_002315296.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73
ref|XP_002312020.1| predicted protein [Populus trichocarpa] gi|2...   280   4e-73
ref|XP_003536358.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   279   8e-73
ref|XP_002533247.1| ubiquitin-conjugating enzyme E2 C, putative ...   278   2e-72

>ref|XP_002275915.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
           gi|147800943|emb|CAN75562.1| hypothetical protein
           VITISV_032578 [Vitis vinifera]
           gi|296086039|emb|CBI31480.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  293 bits (751), Expect = 4e-77
 Identities = 138/165 (83%), Positives = 152/165 (92%)
 Frame = -3

Query: 929 PSKQVKASPPPVDTNSVIQRLQKELMSLMMSGGDLGVSAFPESENIFSWAGTIEGGKGTP 750
           PSKQ+KA+P PVDT+SV QRLQKELM+LMMSGGDLGVSAFPESE+IF+W GTI GG GT 
Sbjct: 26  PSKQLKAAPNPVDTSSVSQRLQKELMALMMSGGDLGVSAFPESESIFTWIGTIMGGNGTV 85

Query: 749 YEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTVLL 570
           YEGLSYKLSLRFPLDYPFKPPQ+KFETMCFHPN+DQ+GNICLDILQDKWSSAYDC+TVLL
Sbjct: 86  YEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNIDQFGNICLDILQDKWSSAYDCKTVLL 145

Query: 569 SVQSLLGEPNTDSPLNSYAASLWSNQEAYKKMVQKQVVDGETFES 435
           S+QSLLGEPN +SPLNSYAASLW+NQE Y+KMV KQ   GE FES
Sbjct: 146 SIQSLLGEPNIESPLNSYAASLWNNQEDYRKMVHKQYFAGEAFES 190


>ref|XP_002315296.1| predicted protein [Populus trichocarpa] gi|222864336|gb|EEF01467.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  281 bits (720), Expect = 2e-73
 Identities = 135/168 (80%), Positives = 144/168 (85%)
 Frame = -3

Query: 938 PPPPSKQVKASPPPVDTNSVIQRLQKELMSLMMSGGDLGVSAFPESENIFSWAGTIEGGK 759
           P  PSKQ    P  V+T SV QRLQKELMSLMM GGDLGVSAFPE E+IF+W GTI GG+
Sbjct: 20  PATPSKQPVVPPNTVETTSVSQRLQKELMSLMMIGGDLGVSAFPEGESIFAWIGTIAGGE 79

Query: 758 GTPYEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRT 579
           GT YEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQ+GNICLDILQDKWSSAYDCRT
Sbjct: 80  GTAYEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQFGNICLDILQDKWSSAYDCRT 139

Query: 578 VLLSVQSLLGEPNTDSPLNSYAASLWSNQEAYKKMVQKQVVDGETFES 435
           +LLS+QSLLGEPN DSPLNSYAA LWSN+E YK+ V KQ   GE FES
Sbjct: 140 ILLSIQSLLGEPNPDSPLNSYAAELWSNKEDYKRKVHKQYYAGEAFES 187


>ref|XP_002312020.1| predicted protein [Populus trichocarpa] gi|222851840|gb|EEE89387.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  280 bits (716), Expect = 4e-73
 Identities = 134/168 (79%), Positives = 144/168 (85%)
 Frame = -3

Query: 938 PPPPSKQVKASPPPVDTNSVIQRLQKELMSLMMSGGDLGVSAFPESENIFSWAGTIEGGK 759
           P  PSKQ  A    VDT SV QRLQKELMSLMM GGDLGVSAFPE E+IF+W GTI GGK
Sbjct: 20  PATPSKQPVAPSNTVDTASVSQRLQKELMSLMMIGGDLGVSAFPEGESIFAWIGTIMGGK 79

Query: 758 GTPYEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRT 579
           GT YEGLSYKLSLRFPLDYPFKPPQ+KFETMCFHPNVDQ+GNICLDILQDKWSSAYDCRT
Sbjct: 80  GTAYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQFGNICLDILQDKWSSAYDCRT 139

Query: 578 VLLSVQSLLGEPNTDSPLNSYAASLWSNQEAYKKMVQKQVVDGETFES 435
           +LLS+QSLLGEPN DSPLN+YAA LW+N+E YK MV +Q   GE FES
Sbjct: 140 ILLSIQSLLGEPNPDSPLNNYAAKLWNNEEDYKSMVHRQYYAGEAFES 187


>ref|XP_003536358.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Glycine max]
          Length = 186

 Score =  279 bits (714), Expect = 8e-73
 Identities = 131/169 (77%), Positives = 148/169 (87%)
 Frame = -3

Query: 941 PPPPPSKQVKASPPPVDTNSVIQRLQKELMSLMMSGGDLGVSAFPESENIFSWAGTIEGG 762
           PP   SKQ   SP  VDT++V QRLQKELM+LMMSGGDLGVSAFP+ E+IF+W GTIEGG
Sbjct: 18  PPAVSSKQPLPSPTAVDTSAVSQRLQKELMALMMSGGDLGVSAFPDGESIFTWIGTIEGG 77

Query: 761 KGTPYEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQYGNICLDILQDKWSSAYDCR 582
           KGT YEGLSYKLSLRFPLDYPFKPPQ+KFETMCFHPNVDQ+GNICLDILQDKWSSAYDCR
Sbjct: 78  KGTQYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQFGNICLDILQDKWSSAYDCR 137

Query: 581 TVLLSVQSLLGEPNTDSPLNSYAASLWSNQEAYKKMVQKQVVDGETFES 435
           T+LLS+QSLL EPN +SPLNSYAA+LW+++E Y++MV KQ   GE  ES
Sbjct: 138 TILLSIQSLLEEPNLESPLNSYAAALWNDKEDYRRMVHKQYFSGEALES 186


>ref|XP_002533247.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
           gi|223526927|gb|EEF29132.1| ubiquitin-conjugating enzyme
           E2 C, putative [Ricinus communis]
          Length = 188

 Score =  278 bits (711), Expect = 2e-72
 Identities = 134/169 (79%), Positives = 145/169 (85%)
 Frame = -3

Query: 941 PPPPPSKQVKASPPPVDTNSVIQRLQKELMSLMMSGGDLGVSAFPESENIFSWAGTIEGG 762
           P   PSKQ  A+P PVDT SV QRLQKELMSLMMSGGDLGVSAFPE E+IF+W GTIEGG
Sbjct: 20  PSATPSKQPAATPNPVDTTSVSQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGG 79

Query: 761 KGTPYEGLSYKLSLRFPLDYPFKPPQIKFETMCFHPNVDQYGNICLDILQDKWSSAYDCR 582
           KGT YEGLSYKLSLRFPLDYPFKPPQ+KFET CFHPNVDQ+GNICLDILQ+KWSSAYDCR
Sbjct: 80  KGTAYEGLSYKLSLRFPLDYPFKPPQVKFETNCFHPNVDQFGNICLDILQEKWSSAYDCR 139

Query: 581 TVLLSVQSLLGEPNTDSPLNSYAASLWSNQEAYKKMVQKQVVDGETFES 435
           T+LLS+QSLLGEPN DSPL+SYAA L +N+E YK MV K    G  FES
Sbjct: 140 TILLSIQSLLGEPNPDSPLDSYAAKLLNNKEEYKTMVHKHYHAGGVFES 188


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