BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002520
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   314   5e-83
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   314   5e-83
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   308   3e-81
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   303   7e-80
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]   300   6e-79

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  314 bits (804), Expect = 5e-83
 Identities = 171/309 (55%), Positives = 196/309 (63%), Gaps = 30/309 (9%)
 Frame = -3

Query: 1363 STPSSYWCYSCSRFVRVLERDSIICSDCQGGFVEE---------RGRQLPA--------- 1238
            ++ +SYWC+ C+RFVRV  +DSI+C  C+ GF+EE           R+ PA         
Sbjct: 4    ASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSENHHRRFPATAMYMLGNN 63

Query: 1237 ----DLSRNTGXXXXXXXXXXXXXXP-VVVLRGPTDGE-------ERGSFELYYDDGAGS 1094
                + S N G                V+VLRGP DG        ER SFELYYDDGAGS
Sbjct: 64   RPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAGS 123

Query: 1093 GLQPLPASMSDFLMSSGFDRLLDQLTQIEINGVGRCQHPPASKVAIESMPTXXXXXXXXX 914
            GL+PLPA+MS+FLM SGFDRLL+QL+QIEING GR +HPPASK A+ESMPT         
Sbjct: 124  GLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIV 183

Query: 913  XXXHCAVCKEPFELGVEAREMPCKHIYHSECILPWLSLRNSCPVCRHELPVADAYGRNSP 734
               HCAVCKE F+LG EAREMPCKHIYHS+CILPWLSLRNSCPVCRHELP      RNSP
Sbjct: 184  TELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSP 243

Query: 733  VSGGSQNNQSPALVEEDAFGLTIWRLPXXXXXXXXXXXXRQVTERELPLVYTEMDGDFSN 554
            VSG      SPA  EE+  GLTIWRLP            R+  ERELP+VYTEMDG F+N
Sbjct: 244  VSGNEA--LSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN 301

Query: 553  GGGPRRILW 527
             G PRRI W
Sbjct: 302  SGAPRRISW 310


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  314 bits (804), Expect = 5e-83
 Identities = 175/321 (54%), Positives = 202/321 (62%), Gaps = 31/321 (9%)
 Frame = -3

Query: 1396 SLSFSIFIYMD-STPSSYWCYSCSRFVRVLERDSIICSDCQGGFVEE---------RGRQ 1247
            S+SF     M+ ++ +SYWC+ C+RFVRV  +DSI+C  C+ GF+EE           R+
Sbjct: 102  SISFGGVXGMEMASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSENHHRR 161

Query: 1246 LPA-------------DLSRNTGXXXXXXXXXXXXXXP-VVVLRGPTDGE-------ERG 1130
             PA             + S N G                V+VLRGP DG        ER 
Sbjct: 162  FPATAMYMLGNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERS 221

Query: 1129 SFELYYDDGAGSGLQPLPASMSDFLMSSGFDRLLDQLTQIEINGVGRCQHPPASKVAIES 950
            SFELYYDDGAGSGL+PLPA+MS+FLM SGFDRLL+QL+QIEING GR +HPPASK A+ES
Sbjct: 222  SFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVES 281

Query: 949  MPTXXXXXXXXXXXXHCAVCKEPFELGVEAREMPCKHIYHSECILPWLSLRNSCPVCRHE 770
            MPT            HCAVCKE F+LG EAREMPCKHIYHS+CILPWLSLRNSCPVCRHE
Sbjct: 282  MPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHE 341

Query: 769  LPVADAYGRNSPVSGGSQNNQSPALVEEDAFGLTIWRLPXXXXXXXXXXXXRQVTERELP 590
            LP      RNSPVSG      SPA  EE+  GLTIWRLP            R+  ERELP
Sbjct: 342  LPTDVPGTRNSPVSG--TEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELP 399

Query: 589  LVYTEMDGDFSNGGGPRRILW 527
            +VYTEMDG F+N G PRRI W
Sbjct: 400  VVYTEMDGGFNNSGAPRRISW 420


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  308 bits (789), Expect = 3e-81
 Identities = 167/304 (54%), Positives = 194/304 (63%), Gaps = 26/304 (8%)
 Frame = -3

Query: 1351 SYWCYSCSRFVRVLERDSIICSDCQGGFVEE-------------------RGRQLPADLS 1229
            SYWCYSC+RFVRV   D+I+C DC GGF+EE                     R   A  S
Sbjct: 2    SYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQPRRPHRFPAAAMYMIENRPNSAQNS 61

Query: 1228 RNTGXXXXXXXXXXXXXXPVVVLRGPTD-----GEERGSFELYYDDGAGSGLQPLPASMS 1064
             +                PV+V+RG  D     G +RG+F+LYYDDG GSGL+PLPAS+S
Sbjct: 62   HSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRGAFDLYYDDGGGSGLRPLPASVS 121

Query: 1063 DFLMSSGFDRLLDQLTQIEINGVGRCQHPPASKVAIESMPTXXXXXXXXXXXXHCAVCKE 884
            +FL+ SGFDRLL+QL+Q+EING+GR + PPASK AIE+MPT            HCAVCKE
Sbjct: 122  EFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMPTIEIADAHVNTEHHCAVCKE 181

Query: 883  PFELGVEAREMPCKHIYHSECILPWLSLRNSCPVCRHELPVADAYGRNSPVSGGSQNNQS 704
            PFELG EAREMPCKHIYHS+CILPWLSLRNSCPVCRHELP  +   RNSP S    N Q+
Sbjct: 182  PFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEE---RNSPES----NEQT 234

Query: 703  PALVEEDAFGLTIWRLPXXXXXXXXXXXXRQVTERELPLVYTEMDGDFSNGGGPRRILW- 527
            P    E+  GLTIWRLP            R+  ERELP+VYTEMDG F+NGG PRRI W 
Sbjct: 235  P----EETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWT 290

Query: 526  -RTN 518
             RTN
Sbjct: 291  SRTN 294


>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
            vinifera]
          Length = 365

 Score =  303 bits (777), Expect = 7e-80
 Identities = 164/310 (52%), Positives = 191/310 (61%), Gaps = 29/310 (9%)
 Frame = -3

Query: 1369 MDSTPSSYWCYSCSRFVRVLERDSIICSDCQGGFVEE--------RGRQLPADL----SR 1226
            M ++ SS+WCY C+RF+RV  +D+I+C DC  GFVE+        R R+LP       +R
Sbjct: 2    MAASGSSFWCYRCNRFIRVWAQDAILCPDCGSGFVEQINNLSRSPRRRRLPGSAMYLENR 61

Query: 1225 NTGXXXXXXXXXXXXXXP--------VVVLRGPTD---------GEERGSFELYYDDGAG 1097
            N                         V+VLRG  D           ERG+FELYYDDG G
Sbjct: 62   NALDQDPVPRIRRARRSGGDRSLFNPVIVLRGSADVNGSEGGGTSGERGNFELYYDDGTG 121

Query: 1096 SGLQPLPASMSDFLMSSGFDRLLDQLTQIEINGVGRCQHPPASKVAIESMPTXXXXXXXX 917
            SGL+PLPAS+S+FLM SGFDRLLDQL Q+EING GRC+HPPASK A+ES+PT        
Sbjct: 122  SGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVASHV 181

Query: 916  XXXXHCAVCKEPFELGVEAREMPCKHIYHSECILPWLSLRNSCPVCRHELPVADAYGRNS 737
                HCAVCKEPFEL  EARE+PCKHIYHS+CILPWLSLRNSCPVCRHELP       +S
Sbjct: 182  LSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPT------DS 235

Query: 736  PVSGGSQNNQSPALVEEDAFGLTIWRLPXXXXXXXXXXXXRQVTERELPLVYTEMDGDFS 557
               G S + QSP L EED  GLTIWRLP            RQ  ERELP+V+TEMDG F+
Sbjct: 236  HEGGSSGHLQSPGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQAAERELPVVFTEMDGGFN 295

Query: 556  NGGGPRRILW 527
              G  RR  W
Sbjct: 296  PSGASRRNPW 305


>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
          Length = 364

 Score =  300 bits (769), Expect = 6e-79
 Identities = 163/310 (52%), Positives = 190/310 (61%), Gaps = 29/310 (9%)
 Frame = -3

Query: 1369 MDSTPSSYWCYSCSRFVRVLERDSIICSDCQGGFVEE--------RGRQLPADL----SR 1226
            M ++ SS+WCY C+RF+RV  +D+I+C DC  GFVE+        R R+LP       +R
Sbjct: 1    MAASGSSFWCYRCNRFIRVWAQDAILCPDCGSGFVEQINNLSRSPRRRRLPGSAMYLENR 60

Query: 1225 NTGXXXXXXXXXXXXXXP--------VVVLRGPTD---------GEERGSFELYYDDGAG 1097
            N                         V+VLRG  D           ERG+FELYYDDG G
Sbjct: 61   NALDQDPVPRIRRARRSGGDRSLFNPVIVLRGSADVNGSEGGGTSGERGNFELYYDDGTG 120

Query: 1096 SGLQPLPASMSDFLMSSGFDRLLDQLTQIEINGVGRCQHPPASKVAIESMPTXXXXXXXX 917
            SGL+PLPAS+S+FLM SGFDRLLDQL Q+EING GRC+HPPASK A+ES+PT        
Sbjct: 121  SGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVASHV 180

Query: 916  XXXXHCAVCKEPFELGVEAREMPCKHIYHSECILPWLSLRNSCPVCRHELPVADAYGRNS 737
                HCAVCKEPFEL  EARE+PCKHIYHS+CILPWLSLRNSCPVCRHELP       +S
Sbjct: 181  LSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPT------DS 234

Query: 736  PVSGGSQNNQSPALVEEDAFGLTIWRLPXXXXXXXXXXXXRQVTERELPLVYTEMDGDFS 557
               G S + QS  L EED  GLTIWRLP            RQ  ERELP+V+TEMDG F+
Sbjct: 235  HEGGSSGHLQSXGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQAAERELPVVFTEMDGGFN 294

Query: 556  NGGGPRRILW 527
              G  RR  W
Sbjct: 295  PSGASRRNPW 304