BLASTX nr result

ID: Cimicifuga21_contig00002369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002369
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   415   e-113
ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   399   e-108
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   399   e-108
gb|AER26533.1| eukaryotic translation initiation factor 3G [Cari...   396   e-108

>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
            [Vitis vinifera]
          Length = 296

 Score =  415 bits (1066), Expect = e-113
 Identities = 204/262 (77%), Positives = 225/262 (85%), Gaps = 1/262 (0%)
 Frame = -2

Query: 1091 PPEIVTEPDANGIKRVISYKLDDEGRKVKVTTTIRIRKLAKARLSKRAIERRSWNKFGDA 912
            PP  V  PD NGIK+VI YK +D+G KVK+TTT RIRKLAKARLSKRAIERRSW KFGDA
Sbjct: 34   PPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWAKFGDA 93

Query: 911  ANKDDGSRLTMVSTEEIILERPRAPGSKADDIKVGGDPLAQLGNVGAVLMVCRTCGKKGD 732
             ++D GSRLTMVSTEEI+LERPRAPGSKA++ KV GD LAQLG  GAVLMVCRTCGKKGD
Sbjct: 94   VHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLAQLGKGGAVLMVCRTCGKKGD 153

Query: 731  HWTSKCPYKDLAPAPDSFVDKPPSDAG-ANSSAAIKGTYVPPSQRAGAERSGQEMRRRND 555
            HWTS+CPYKDLAP  + F+DKP +  G A +S   KGTYVPP  RAGAER+G EMRRRN+
Sbjct: 154  HWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAERTGTEMRRRNE 213

Query: 554  ENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAI 375
            ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K DAE+AI
Sbjct: 214  ENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAI 273

Query: 374  AKLNGYGYDNLILRVEWAAPRA 309
             KLNGYGYDNLILRVEWA PR+
Sbjct: 274  NKLNGYGYDNLILRVEWATPRS 295


>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/262 (74%), Positives = 225/262 (85%), Gaps = 2/262 (0%)
 Frame = -2

Query: 1091 PPEIVTEPDANGIKRVISYKLDDEGRKVKVTTTIRIRKLAKARLSKRAIERRSWNKFGDA 912
            PP+ V  PD NGIK+VI YK +D+G KVK+TTT R+RKLAKARLSKRA+ERR+W+KFGDA
Sbjct: 31   PPKQVIGPDENGIKKVIEYKFNDDGNKVKITTTTRVRKLAKARLSKRALERRNWSKFGDA 90

Query: 911  ANKDDGSRLTMVSTEEIILERPRAPGSKADDIKVGGDPLAQLGNVGAVLMVCRTCGKKGD 732
             ++D GSRLTMVSTEEI+LERPRA G+KAD+ K+ GD LAQLG  GAVLMVCRTCGKKGD
Sbjct: 91   IHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLAQLGKGGAVLMVCRTCGKKGD 150

Query: 731  HWTSKCPYKDLAPAPDSFVDKPP-SDAGANSSAAIKGTYVPPSQRAGAERS-GQEMRRRN 558
            HWTS+CPYKDLA  P++F+DKPP ++    ++ A KG YVPPS RAGAER+ G +MRRRN
Sbjct: 151  HWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSDMRRRN 210

Query: 557  DENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKA 378
            +ENSVRVTNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K DAE+A
Sbjct: 211  EENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERA 270

Query: 377  IAKLNGYGYDNLILRVEWAAPR 312
            I KLNGYGYDNLILRVEWA PR
Sbjct: 271  INKLNGYGYDNLILRVEWATPR 292


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
            unknown [Populus trichocarpa] gi|222851937|gb|EEE89484.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  399 bits (1024), Expect = e-108
 Identities = 195/263 (74%), Positives = 225/263 (85%), Gaps = 2/263 (0%)
 Frame = -2

Query: 1091 PPEIVTEPDANGIKRVISYKLDDEGRKVKVTTTIRIRKLAKARLSKRAIERRSWNKFGDA 912
            PP+ V  PD NGIK+VI YK +D+G K+K+TTT R+RKLAKARLSKRA+ERR+W KFGDA
Sbjct: 30   PPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKLAKARLSKRAVERRNWPKFGDA 89

Query: 911  ANKDDGSRLTMVSTEEIILERPRAPGSKADDIKVGGDPLAQLGNVGAVLMVCRTCGKKGD 732
             ++D GSRLTMVSTEEI+LERPRAPG+KAD+ K+ GD LAQLG  GAVLMVCRTCGKKGD
Sbjct: 90   VHEDVGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNLAQLGKGGAVLMVCRTCGKKGD 149

Query: 731  HWTSKCPYKDLAPAPDSFVDKP-PSDAGANSSAAIKGTYVPPSQRAGAER-SGQEMRRRN 558
            HWTS+CPYKDLA  P++F+DKP  ++    +S A KG YVPPS RAGAER +G +MRRRN
Sbjct: 150  HWTSRCPYKDLAQPPETFIDKPAATETAMAASGATKGAYVPPSMRAGAERTTGSDMRRRN 209

Query: 557  DENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKA 378
            +ENSVRVTNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K DAE+A
Sbjct: 210  EENSVRVTNLSEDTREPDLLELFRTFGHVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERA 269

Query: 377  IAKLNGYGYDNLILRVEWAAPRA 309
            I KLNGYGYDNLILRVEWA PR+
Sbjct: 270  INKLNGYGYDNLILRVEWATPRS 292


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
            [Vitis vinifera]
          Length = 301

 Score =  399 bits (1024), Expect = e-108
 Identities = 196/264 (74%), Positives = 222/264 (84%), Gaps = 4/264 (1%)
 Frame = -2

Query: 1091 PPEIVTEPDANGIKRVISYKLDDEGRKVKVTTTIRIRKLAKARLSKRAIERRSWNKFGDA 912
            PP  V  P+ NGIK+VI YK +++G KVK+TTT R+RKLAKARLSKRA+ERRSW KFGDA
Sbjct: 39   PPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRKLAKARLSKRAVERRSWAKFGDA 98

Query: 911  ANKDDGSRLTMVSTEEIILERPRAPGSKADDIKVGGDPLAQLGNVGAVLMVCRTCGKKGD 732
             ++D GSRLTMVSTEEI+LERPRAPG+KA++ K+ GD LAQLG  GAVLMVCRTCGKKGD
Sbjct: 99   VHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLAQLGKGGAVLMVCRTCGKKGD 158

Query: 731  HWTSKCPYKDLAPAPDSFVDKPPSDAGANSSAAIKGT----YVPPSQRAGAERSGQEMRR 564
            HWTS+CPYKDLA   D+FVDKPP+   A ++ A  GT    YVPP  R GAER G +MRR
Sbjct: 159  HWTSRCPYKDLAAQTDAFVDKPPA---AETTVATTGTGKAAYVPPGMRPGAERVGSDMRR 215

Query: 563  RNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAE 384
            RN+ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K DAE
Sbjct: 216  RNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAE 275

Query: 383  KAIAKLNGYGYDNLILRVEWAAPR 312
            +AI KLNGYGYDNLILRVEWA PR
Sbjct: 276  RAINKLNGYGYDNLILRVEWATPR 299


>gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
          Length = 297

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/263 (73%), Positives = 226/263 (85%), Gaps = 2/263 (0%)
 Frame = -2

Query: 1091 PPEIVTEPDANGIKRVISYKLDDEGRKVKVTTTIRIRKLAKARLSKRAIERRSWNKFGDA 912
            PP+ V  PD NGIKRVI YK +++G +VK+TTT R+RKLAKAR+SKRA+ERR W KFGDA
Sbjct: 34   PPKQVHGPDENGIKRVIEYKFNEDGNRVKITTTTRVRKLAKARVSKRAMERRGWAKFGDA 93

Query: 911  ANKDDGSRLTMVSTEEIILERPRAPGSKADDIKVGGDPLAQLGNVGAVLMVCRTCGKKGD 732
             ++D GSRLTMVSTEEI+LERPRAPGSK ++ KV GD LAQLG  GA+LMVCRTCGKKGD
Sbjct: 94   VHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDSLAQLGKGGAILMVCRTCGKKGD 153

Query: 731  HWTSKCPYKDLAPAPDSFVDKP-PSDAGANSSAAIKGTYVPPSQRAGAERS-GQEMRRRN 558
            HWTS+CPYKDLAP  ++FVDKP  S+  A ++ + K TYVPPS RAGAER+ G +MRRRN
Sbjct: 154  HWTSRCPYKDLAPQTEAFVDKPAASETSAAAAGSGKSTYVPPSMRAGAERTGGSDMRRRN 213

Query: 557  DENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKA 378
            DENSVRVTNLSEDTREPDL +LF TFGPV+RVY+A DQKTG+SRGFGFVNFV++ DA++A
Sbjct: 214  DENSVRVTNLSEDTREPDLLELFRTFGPVTRVYVAIDQKTGVSRGFGFVNFVNREDAQRA 273

Query: 377  IAKLNGYGYDNLILRVEWAAPRA 309
            I KLNGYGYDNLILRVEWA PRA
Sbjct: 274  INKLNGYGYDNLILRVEWATPRA 296


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