BLASTX nr result
ID: Cimicifuga21_contig00001902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001902
(2009 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like... 655 0.0
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago... 623 e-176
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like... 622 e-176
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like... 618 e-174
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2... 608 e-171
>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
gi|297741051|emb|CBI31782.3| unnamed protein product
[Vitis vinifera]
Length = 565
Score = 655 bits (1691), Expect = 0.0
Identities = 356/587 (60%), Positives = 423/587 (72%), Gaps = 17/587 (2%)
Frame = +3
Query: 177 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVELQSVCKSQSCIKDKVYLRNLFHR 356
MGVKNLWDILESCKKTLPL+HLQNKRVCIDLSCW+V+LQ+V KS + IKDK+YL+ LFHR
Sbjct: 1 MGVKNLWDILESCKKTLPLYHLQNKRVCIDLSCWMVQLQNVNKSHASIKDKLYLKGLFHR 60
Query: 357 LRALLALNCSLIFVTDGSIPAIKLSTYRRRLGIVSEVTRDETKSNNLP-LPRNMGSEFSC 533
LRAL+ALNCSL+FVTDGSIPAIKL+TYRRRL +EVTRDET S+N+P L RNMGSEFSC
Sbjct: 61 LRALIALNCSLLFVTDGSIPAIKLATYRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSC 120
Query: 534 MIKEAKVLGMALGIPCLDGIEEGEAQCALLNSESLCDGCFTADSDIFLFGAKTVYRDIDL 713
MIKEAKVLG+ALGIPCLDGIEE EAQCALLNSESLCDGCFT+DSD+FLFGA+TVYRDI L
Sbjct: 121 MIKEAKVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL 180
Query: 714 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGRETACQIVKSFGDHTV 893
G+GG+VVCYEM DIE LGFGRNSLITLALLLGSDYS GVHGFG E+ACQIVKS G+ V
Sbjct: 181 GEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVV 240
Query: 894 LQRAASEGLAFAKKTKGLKKQG--VFCNHDANKENSLVYKHKNNVNEQVSQKDGQFLKVI 1067
L++ A EG++FAKK+KG +KQG + CN +KEN H+ N+N +FL+VI
Sbjct: 241 LKKIALEGISFAKKSKGSRKQGQVLKCN---DKENCS--DHEMNINGSEHSSQREFLRVI 295
Query: 1068 DAYLQPKCHSPDSEAVHRVLVHYPFQRTKLQQLCGQFFGWTSEKTDEYILPKIAERDLRR 1247
DAYL+PKCHS DS+AVHR L PFQRT+ Q++C Q F W EKTDEYILPKIAERDLRR
Sbjct: 296 DAYLKPKCHSADSDAVHRALALLPFQRTEAQKICAQLFEWPPEKTDEYILPKIAERDLRR 355
Query: 1248 FSNLRSSTSELGVQIPLHEMPATCPISAIIKRRKVQGIECFEVTWKEFDSLNSSVVPADL 1427
F+NLRS++S LG+ PLHE+P CPIS IIK RKVQG ECFEV+W+EFD L SS++PA+L
Sbjct: 356 FANLRSTSSNLGIHFPLHEIPVKCPISGIIKHRKVQGRECFEVSWEEFDGLKSSIIPAEL 415
Query: 1428 IECACPEMIVEFE-----ERLQGXXXXXXXXXXXXXXXAAMDEXXXXXXXXXXEIDSESN 1592
++ ACPE IVEFE E+ Q A +D+ +D ES
Sbjct: 416 VKSACPEKIVEFEGRKPQEKKQNHRKPRPKKSNNRTPLAEIDKQLQNLL-----LDIESG 470
Query: 1593 GVSTSALCQGSFIQKNAIPEVIDIMSSPPIRACKAPNFQDLLLD------NSGVPSSAVC 1754
G S + S + S I A KA Q +LLD N + +C
Sbjct: 471 GNSFQNVSFSSSMTP----------SKTQIDATKAAKTQYMLLDTESESDNDNHNEAIIC 520
Query: 1755 QGASLEKLAVPEVIDIVSPTP--RVCKTSEFQNTVD-RQIDVIDLSE 1886
+ VID++SP+P R K S+ Q + +QIDVIDLS+
Sbjct: 521 HQNG--RCGAEIVIDLLSPSPAIRARKVSKCQQGNNGQQIDVIDLSD 565
>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
protein [Medicago truncatula]
Length = 571
Score = 623 bits (1606), Expect = e-176
Identities = 328/600 (54%), Positives = 421/600 (70%), Gaps = 4/600 (0%)
Frame = +3
Query: 177 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVELQSVCKSQSCIKDKVYLRNLFHR 356
MGVKNLWDILESCKKT+PLHHLQNKRVC+DLSCW+V+LQ+VCKS +C+K+KV+LR LFHR
Sbjct: 1 MGVKNLWDILESCKKTVPLHHLQNKRVCVDLSCWMVQLQNVCKSHACLKEKVHLRGLFHR 60
Query: 357 LRALLALNCSLIFVTDGSIPAIKLSTYRRRLGIVSEVTRDETK-SNNLPLPRNMGSEFSC 533
LRAL+ALNC+++FV+DGSIPAIKLSTYRRRL EV + ET L RN+GSEFSC
Sbjct: 61 LRALIALNCTVVFVSDGSIPAIKLSTYRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSC 120
Query: 534 MIKEAKVLGMALGIPCLDGIEEGEAQCALLNSESLCDGCFTADSDIFLFGAKTVYRDIDL 713
MI EAK+LGMALG+ CL+GIEE EAQCALLNSESLCDGCF++DSDIFLFGA+TVYRDI L
Sbjct: 121 MISEAKILGMALGVSCLNGIEEAEAQCALLNSESLCDGCFSSDSDIFLFGARTVYRDICL 180
Query: 714 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGRETACQIVKSFGDHTV 893
GDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY GVHG G ++ACQIVKS GD V
Sbjct: 181 GDGGYVVCYEMADIERKLGFGRDSLICLSLLLGSDYYPGVHGLGPDSACQIVKSIGDKFV 240
Query: 894 LQRAASEGLAFAKKTKGLKKQGVFCNHDANKENSLVYKHKNNVNEQVSQKDGQFLKVIDA 1073
L++ ASEGL + KK KG +N + +D L+VIDA
Sbjct: 241 LKKFASEGLGWVKKRKG---------------------GQNKIG-----RDDTILQVIDA 274
Query: 1074 YLQPKCHSPDSEAVHRVLVHYPFQRTKLQQLCGQFFGWTSEKTDEYILPKIAERDLRRFS 1253
YL+PKCHS DSE + + L YPFQRTKL +C F W SE+TD YILP IAERDLRRF+
Sbjct: 275 YLKPKCHSADSEFLLKALATYPFQRTKLHHICAVSFEWPSERTDGYILPCIAERDLRRFA 334
Query: 1254 NLRSSTSELGVQIPLHEMPATCPISAIIKRRKVQGIECFEVTWKEFDSLNSSVVPADLIE 1433
NLR ++SELG+ +PLHE+P CP+S IIK RK QG EC+EV+WK+ D L +S+VPADLIE
Sbjct: 335 NLRLTSSELGLNLPLHEIPVKCPVSEIIKSRKAQGRECYEVSWKDMDGLETSIVPADLIE 394
Query: 1434 CACPEMIVEFEER--LQGXXXXXXXXXXXXXXXAAMDEXXXXXXXXXXEIDSESNGVSTS 1607
ACPE I EFEE+ L+ +++ E + + + + ++
Sbjct: 395 SACPEKISEFEEKKALRKKQNVQKRRPKKKETTSSLAELDLKLQNLLLDDNLQDDTNHSA 454
Query: 1608 ALCQGSFIQKNAIPEVIDIMSSPPIRACKAPNFQDLLLDNSGVPSSAVCQGASLEKLAVP 1787
+ G +++ D+ + + + + + + + S + S+ V +S +K
Sbjct: 455 SDSSGRILEETTSTAEDDLNTENMMLSHDDIEYNEWIQNISNISSNDVV--SSKDKNV-- 510
Query: 1788 EVIDIVSPTP-RVCKTSEFQNTVDRQIDVIDLSESETDTSPEHARKARELRLFLASIRTD 1964
VID++SP+P + +S+F + D+ IDVI+LS+SE + SPEH +KA+ELR+FLASIR +
Sbjct: 511 -VIDLLSPSPLKPSNSSKFHPSSDQNIDVINLSDSENEVSPEHKQKAKELRMFLASIRNE 569
>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
Length = 588
Score = 622 bits (1605), Expect = e-176
Identities = 337/609 (55%), Positives = 420/609 (68%), Gaps = 13/609 (2%)
Frame = +3
Query: 177 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVELQSVCKSQSCIKDKVYLRNLFHR 356
MGVKNLWD+LESCKKT+PLHHLQNKRVC+DLSCW+V+L SV KS +C+K+KVYLR LFHR
Sbjct: 1 MGVKNLWDVLESCKKTVPLHHLQNKRVCVDLSCWMVQLHSVSKSHACVKEKVYLRGLFHR 60
Query: 357 LRALLALNCSLIFVTDGSIPAIKLSTYRRRLGIVSEVTRDETKSN---NLPLPRNMGSEF 527
LRAL+ALNCSLIFV+DG+IPAIKLSTYRRRL + EV + ++N L RNMGSEF
Sbjct: 61 LRALIALNCSLIFVSDGAIPAIKLSTYRRRLNVGKEVQVAQNETNLQKATSLQRNMGSEF 120
Query: 528 SCMIKEAKVLGMALGIPCLDGIEEGEAQCALLNSESLCDGCFTADSDIFLFGAKTVYRDI 707
SCMIKEAKVLGMALGI CL+GIEE EAQCALLN ESLCDGCF++DSDIFLFGA+TVYRDI
Sbjct: 121 SCMIKEAKVLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSSDSDIFLFGARTVYRDI 180
Query: 708 DLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGRETACQIVKSFGDH 887
LGDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY GVHG G E+ACQIVKS GD
Sbjct: 181 CLGDGGYVVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESACQIVKSIGDK 240
Query: 888 TVLQRAASEGLAFAKKTKGLKKQGVFCNHDANKENSLVYKHKNNVNEQVSQKDGQFLKVI 1067
+L++ ASEGL + KK KG+ + + ++Y KN++ + D L+VI
Sbjct: 241 YILKKFASEGLGWVKKRKGIPS---ILHSNLIILILILYSCKNDL-----RPDDNILQVI 292
Query: 1068 DAYLQPKCHSPDSEAVHRVLVHYPFQRTKLQQLCGQFFGWTSEKTDEYILPKIAERDLRR 1247
+AY++PKCH DS+ VH+ L YPFQRTKLQQ+C FF W SEKTD YILP IAER+LRR
Sbjct: 293 NAYMKPKCHQADSDIVHKALAQYPFQRTKLQQICVGFFEWPSEKTDGYILPNIAERNLRR 352
Query: 1248 FSNLRSSTSELGVQIPLHEMPATCPISAIIKRRKVQGIECFEVTWKEFDSLNSSVVPADL 1427
F+NLR ++SE+G+ +PLHE+P CP+S IIK R+VQG EC+EV+W+ D L +S+VPADL
Sbjct: 353 FANLRLTSSEVGLNLPLHEIPVKCPVSEIIKSRRVQGRECYEVSWEGMDGLETSIVPADL 412
Query: 1428 IECACPEMIVEFEER-----LQGXXXXXXXXXXXXXXXAAMDEXXXXXXXXXXEIDSESN 1592
IE AC E I+EFEER Q A +D D +
Sbjct: 413 IESACREKILEFEERKAQRKKQNIQKRKPKKKETNSSVAELDLKLQNLLLDINLRDEANF 472
Query: 1593 GVSTSALCQGSFIQKNAIPEVIDIMSSPPIRACKAPNFQDLLLDNSGVPSSAVCQGASLE 1772
S S+ I + M+ + N DLL + + + + Q S E
Sbjct: 473 NASDSS---------GRISRITTDMAEADL------NTTDLLPLSHDIEHTGLIQNTSSE 517
Query: 1773 ---KLAVPEVIDIVSPTP--RVCKTSEFQNTVDRQIDVIDLSESETDTSPEHARKARELR 1937
+ E+ID++SP+P + S+ Q + D+ I+VI+LS+SE D S E +KA+ELR
Sbjct: 518 VVSSIDKNEIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKELR 577
Query: 1938 LFLASIRTD 1964
LFLASIR +
Sbjct: 578 LFLASIRNE 586
>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
Length = 563
Score = 618 bits (1594), Expect = e-174
Identities = 338/597 (56%), Positives = 407/597 (68%), Gaps = 3/597 (0%)
Frame = +3
Query: 177 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVELQSVCKSQSCIKDKVYLRNLFHR 356
MGVKNLWDILESCKKTLPLH LQNKR+CIDLSCWIVEL SV KS K YL+ LF+R
Sbjct: 1 MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWIVELSSVSKSHCHSNSKFYLKGLFYR 60
Query: 357 LRALLALNCSLIFVTDGSIPAIKLSTYRRRLGIVSEVTRDETKSNNL-PLPRNMGSEFSC 533
LR L+ALNCSLIFVTDGSIP IKLSTYRRRL +EV + + + L RN GSEFS
Sbjct: 61 LRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFSL 120
Query: 534 MIKEAKVLGMALGIPCLDGIEEGEAQCALLNSESLCDGCFTADSDIFLFGAKTVYRDIDL 713
MIKEA+ LG+ALGIPCLD +EE EAQCALLNSE LCDGCFT+DSD FLFGA+TVYRDI L
Sbjct: 121 MIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICL 180
Query: 714 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGRETACQIVKSFGDHTV 893
GD GHVVCYEM DIE +LGFGRNS+IT ALLLGSDYS GV+G GRE+ACQ+VK+ GD V
Sbjct: 181 GDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESACQLVKAVGDGAV 240
Query: 894 LQRAASEGLAFAKKTKGLKKQGVFCNHDANKENSLVYKHKNNVNEQVSQKDGQFLKVIDA 1073
LQ+ SEGLA AKK + KKQG+ + + K +F +VIDA
Sbjct: 241 LQKITSEGLALAKKGENSKKQGL----------------PKSGHGHYMLKCDEFSEVIDA 284
Query: 1074 YLQPKCHSPDSEAVHRVLVHYPFQRTKLQQLCGQFFGWTSEKTDEYILPKIAERDLRRFS 1253
YL+PKCHS DSEAV RVL +PFQ KLQQ+C +FF W+ EKTDE ILPKIAERDLRRF+
Sbjct: 285 YLKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENILPKIAERDLRRFA 344
Query: 1254 NLRSSTSELGVQIPLHEMPATCPISAIIKRRKVQGIECFEVTWKEFDSLNSSVVPADLIE 1433
N+RS TSELG IPL E+P +CPIS I+K RKVQG EC+EV+WK LN SVV ADL++
Sbjct: 345 NIRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLNLSVVSADLLQ 403
Query: 1434 CACPEMIVEFEERLQGXXXXXXXXXXXXXXXAAMDEXXXXXXXXXXEIDSESNGVSTSAL 1613
ACPEMI+EFEE+ A M E EI+SES V +
Sbjct: 404 RACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIESESRVVHN--I 461
Query: 1614 CQGSFIQKNAIPEVIDIMSSPPIRACKAPNFQDLLLDNSGVPSSAVCQGASLEKLAVPEV 1793
K + V ++ + N + +++D++ + S +++ EV
Sbjct: 462 SHVPIDSKTSGTGVHELNQEVFL------NIEPIIVDHA--------RSCSTKRI---EV 504
Query: 1794 IDIVSPTPRV--CKTSEFQNTVDRQIDVIDLSESETDTSPEHARKARELRLFLASIR 1958
ID++SP+P + S+FQ ++IDVIDLS++E D SPEH RKARELR FLAS++
Sbjct: 505 IDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561
>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
predicted protein [Populus trichocarpa]
Length = 541
Score = 608 bits (1568), Expect = e-171
Identities = 343/600 (57%), Positives = 398/600 (66%), Gaps = 4/600 (0%)
Frame = +3
Query: 177 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVELQSVCKSQ-SCIKDKVYLRNLFH 353
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCW+V+LQ+V K+ +KDK Y+RNLFH
Sbjct: 1 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNKTHCGLVKDKPYIRNLFH 60
Query: 354 RLRALLALNCSLIFVTDGSIPAIKLSTYRRRLGIVSEVTRDETKSNNL-PLPRNMGSEFS 530
RLRAL+ALNCSLIFV DGSIPAIKL+TYRRRL + EVT+DET S L RNMGSEFS
Sbjct: 61 RLRALIALNCSLIFVADGSIPAIKLATYRRRLNLGLEVTQDETNSQKACSLRRNMGSEFS 120
Query: 531 CMIKEAKVLGMALGIPCLDGIEEGEAQCALLNSESLCDGCFTADSDIFLFGAKTVYRDID 710
CMIKEAK +G+ALGIPCLD IEE EAQCALLN+ESLCDGCF++DSD+FLFGA+TVYRDI
Sbjct: 121 CMIKEAKDIGLALGIPCLDSIEEAEAQCALLNTESLCDGCFSSDSDVFLFGARTVYRDIC 180
Query: 711 LGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGRETACQIVKSFGDHT 890
LG+G HVVCYEM ++ERKLGFGRNSLITLAL+LGSDYS GVHG G E+ACQIVKS GD
Sbjct: 181 LGEG-HVVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQIVKSIGDSN 239
Query: 891 VLQRAASEGLAFAKKTKGLKKQGVFCNHDANKENSLVYKHKNNVNEQVSQKDGQFLKVID 1070
VLQ+ ASEGL FAKK K KKQ + K NSL + N + K + L+ +
Sbjct: 240 VLQKIASEGLPFAKKIKTSKKQ-----MRSKKTNSLDSEIHFNGKYLLCCKTLKCLRQ-E 293
Query: 1071 AYLQPKCHSPDSEAVHRVLVHYPFQRTKLQQLCGQFFGWTSEKTDEYILPKIAERDLRRF 1250
A K DS+A RVL +PFQR KLQ +C QFFGW EKTDEY LPKIAERDLRRF
Sbjct: 294 AITIQKGRMTDSDAACRVLSQHPFQRLKLQGICAQFFGWPPEKTDEYTLPKIAERDLRRF 353
Query: 1251 SNLRSSTSELGVQIPLHEMPATCPISAIIKRRKVQGIECFEVTWKEFDSLNSSVVPADLI 1430
+NLRS++SELGV +PL ++P CP+S ++K+RKVQG ECFEV W+ FD L +S+VPADL+
Sbjct: 354 ANLRSTSSELGVNLPLQKIPVKCPVSGVVKQRKVQGTECFEVLWEGFDGLKTSIVPADLL 413
Query: 1431 ECACPEMIVEFEER--LQGXXXXXXXXXXXXXXXAAMDEXXXXXXXXXXEIDSESNGVST 1604
E ACPE I EFEE+ L AM E +I+ SN
Sbjct: 414 ESACPEKIAEFEEKTALGKKQNQRKPGSKKSGNRLAMAEIDLKLQTLLLDIEPGSN---- 469
Query: 1605 SALCQGSFIQKNAIPEVIDIMSSPPIRACKAPNFQDLLLDNSGVPSSAVCQGASLEKLAV 1784
C SF EVID+ S
Sbjct: 470 -TACSTSFQY-----EVIDLCSP------------------------------------- 486
Query: 1785 PEVIDIVSPTPRVCKTSEFQNTVDRQIDVIDLSESETDTSPEHARKARELRLFLASIRTD 1964
SP R S Q D+ +VIDLSESE + SPEHARKAR LR+F+ASIR D
Sbjct: 487 -------SPVARTRTVSRCQRVNDQHSEVIDLSESENEMSPEHARKARALRMFIASIRDD 539