BLASTX nr result

ID: Cimicifuga21_contig00001889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001889
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis ...   349   3e-94
ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis s...   344   1e-92
gb|AFK38364.1| unknown [Lotus japonicus]                              339   3e-91
ref|XP_003532017.1| PREDICTED: GPN-loop GTPase 3-like [Glycine max]   339   3e-91
gb|ACU19552.1| unknown [Glycine max]                                  338   9e-91

>ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis vinifera]
           gi|296088830|emb|CBI38288.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  349 bits (896), Expect = 3e-94
 Identities = 166/177 (93%), Positives = 175/177 (98%)
 Frame = +1

Query: 211 MGFAQLVIGPAGSGKSTYCSSLYQHCQTVRRNIHIVNLDPAAENFDYPVAMDIRELVSLE 390
           MGFAQLVIGPAGSGKSTYCSSLYQHC+T+RR IHIVNLDPAAE+FDYPVAMDIRELVSL+
Sbjct: 1   MGFAQLVIGPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIRELVSLD 60

Query: 391 DVMEELKLGPNGGLVYCMEHLEENLDDWLTEELDNYIDDDYLVFDCPGQIELFSHVPVLR 570
           DVMEEL LGPNGGL+YCMEHLEENLDDWLT+ELDNY+DDDYLVFDCPGQIELFSHVP+LR
Sbjct: 61  DVMEELGLGPNGGLMYCMEHLEENLDDWLTDELDNYLDDDYLVFDCPGQIELFSHVPMLR 120

Query: 571 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMSSLSAMVQLELPHVNILSKMDL 741
           NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCM+SLSAMVQLELPHVNILSKMDL
Sbjct: 121 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDL 177


>ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus]
           gi|449524838|ref|XP_004169428.1| PREDICTED: GPN-loop
           GTPase 3-like [Cucumis sativus]
          Length = 268

 Score =  344 bits (883), Expect = 1e-92
 Identities = 161/177 (90%), Positives = 174/177 (98%)
 Frame = +1

Query: 211 MGFAQLVIGPAGSGKSTYCSSLYQHCQTVRRNIHIVNLDPAAENFDYPVAMDIRELVSLE 390
           MG+AQLVIGPAGSGKSTYCSSLYQHC+TV R +H+VNLDPAAENFDYPVAMDIREL+SLE
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLYQHCETVGRTMHVVNLDPAAENFDYPVAMDIRELISLE 60

Query: 391 DVMEELKLGPNGGLVYCMEHLEENLDDWLTEELDNYIDDDYLVFDCPGQIELFSHVPVLR 570
           DVMEEL LGPNGGL+YCMEHLEENLDDWLTEEL+NY+DDDYLVFDCPGQIELFSHVPVL+
Sbjct: 61  DVMEELGLGPNGGLLYCMEHLEENLDDWLTEELNNYMDDDYLVFDCPGQIELFSHVPVLK 120

Query: 571 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMSSLSAMVQLELPHVNILSKMDL 741
           NFV+HLKRKNFNVCAVYLLDSQFMTD+TKFISGCM+SLSAMVQLELPH+NILSKMDL
Sbjct: 121 NFVEHLKRKNFNVCAVYLLDSQFMTDITKFISGCMASLSAMVQLELPHINILSKMDL 177


>gb|AFK38364.1| unknown [Lotus japonicus]
          Length = 267

 Score =  339 bits (870), Expect = 3e-91
 Identities = 158/177 (89%), Positives = 172/177 (97%)
 Frame = +1

Query: 211 MGFAQLVIGPAGSGKSTYCSSLYQHCQTVRRNIHIVNLDPAAENFDYPVAMDIRELVSLE 390
           MG+AQLVIGPAGSGKSTYCSSL+QHC+T RR IH+VNLDPAAENFDYPVAMD+REL+SL+
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLHQHCETTRRTIHVVNLDPAAENFDYPVAMDVRELISLD 60

Query: 391 DVMEELKLGPNGGLVYCMEHLEENLDDWLTEELDNYIDDDYLVFDCPGQIELFSHVPVLR 570
           DVMEEL LGPNGGLVYCMEHLEENLDDWL EELDNY+DDDYLVFDCPGQIEL+SHVPVL+
Sbjct: 61  DVMEELGLGPNGGLVYCMEHLEENLDDWLDEELDNYLDDDYLVFDCPGQIELYSHVPVLK 120

Query: 571 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMSSLSAMVQLELPHVNILSKMDL 741
           NFV+HL++KNFNVC VYLLDSQFMTDVTKFISGCM+SLSAMVQLELPHVNILSKMDL
Sbjct: 121 NFVEHLQQKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDL 177


>ref|XP_003532017.1| PREDICTED: GPN-loop GTPase 3-like [Glycine max]
          Length = 267

 Score =  339 bits (870), Expect = 3e-91
 Identities = 159/177 (89%), Positives = 172/177 (97%)
 Frame = +1

Query: 211 MGFAQLVIGPAGSGKSTYCSSLYQHCQTVRRNIHIVNLDPAAENFDYPVAMDIRELVSLE 390
           MG+AQLVIGPAGSGKSTYCSSLY+HC   RR+IH+VNLDPAAENFDYPVAMDIREL+SL+
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLD 60

Query: 391 DVMEELKLGPNGGLVYCMEHLEENLDDWLTEELDNYIDDDYLVFDCPGQIELFSHVPVLR 570
           DVMEEL LGPNGGLVYCMEHLE+NLDDWLTEELDNY+DDDYLVFDCPGQIEL+SHVPVL+
Sbjct: 61  DVMEELGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDDDYLVFDCPGQIELYSHVPVLK 120

Query: 571 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMSSLSAMVQLELPHVNILSKMDL 741
           NFV+HLKRKNF+VCAVYLLDSQFMTDVTKFISGCM+ LSAMVQLELPHVNILSKMDL
Sbjct: 121 NFVEHLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDL 177


>gb|ACU19552.1| unknown [Glycine max]
          Length = 267

 Score =  338 bits (866), Expect = 9e-91
 Identities = 158/177 (89%), Positives = 171/177 (96%)
 Frame = +1

Query: 211 MGFAQLVIGPAGSGKSTYCSSLYQHCQTVRRNIHIVNLDPAAENFDYPVAMDIRELVSLE 390
           MG+AQLVIGPAGSGKSTYCSSLY+HC   RR+IH+VNLDPAAENFDYPVAMDIREL+SL+
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLD 60

Query: 391 DVMEELKLGPNGGLVYCMEHLEENLDDWLTEELDNYIDDDYLVFDCPGQIELFSHVPVLR 570
           DVMEEL LGPNGGLVYCMEHLE+NLDDWLTEELDNY+DDDYLVFDCPGQIEL+SH PVL+
Sbjct: 61  DVMEELGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDDDYLVFDCPGQIELYSHAPVLK 120

Query: 571 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMSSLSAMVQLELPHVNILSKMDL 741
           NFV+HLKRKNF+VCAVYLLDSQFMTDVTKFISGCM+ LSAMVQLELPHVNILSKMDL
Sbjct: 121 NFVEHLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDL 177


Top