BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001838
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   270   8e-70
ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   266   1e-68
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   249   9e-64
ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like...   245   2e-62
ref|NP_001044790.1| Os01g0846500 [Oryza sativa Japonica Group] g...   243   1e-61

>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
            gi|223536493|gb|EEF38140.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  270 bits (689), Expect = 8e-70
 Identities = 159/351 (45%), Positives = 215/351 (61%), Gaps = 11/351 (3%)
 Frame = -2

Query: 1299 SYEELELAINDVLYLIKPSHKDHEVRKNLIVAFGALINSVIGLGDAKVEPFGSFLYNLYT 1120
            ++  LE  + D L +IKP  +D  VR  +I     +I S+  L  A VEPFGSF+ NL+T
Sbjct: 3    AHSVLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNLFT 62

Query: 1119 RKADLDLSVDVPSVILTQSA------DVLEDIRGAL-QNINVPILNYVPEGRVPLLTFES 961
            R  DLD+S+ + +     SA      +VL +   AL Q      L +VP  RVPLL FES
Sbjct: 63   RWGDLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKGGWRRLQFVPNARVPLLKFES 122

Query: 960  TKWNVTCDVTISNHSAQIKSKFLLWISKIDKRFCDMILLVKEWARAYDINNPKEGTLNSY 781
             + N++CDV+I N   QIKS FL W+++ID RF DM+LLVKEWA+A++INNPK GTLNSY
Sbjct: 123  GRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVKEWAKAHNINNPKTGTLNSY 182

Query: 780  ALCLLVIFHLQTCVPAILPPLEEIYMGNINVHSSMVST-EESRIQRVCDTNIEKFMS--L 610
            +L LLVIFH QTCVPAILPPL+EIY  N+    + V T  E RI+  C+ NI ++MS   
Sbjct: 183  SLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSDKY 242

Query: 609  RTVNRSTLPQLMVSFFEKFSQLKGMASKHVMSTYTGKWEDRRS-CRWMEAHIYNKLIIED 433
            R VNRS+L +L +SFF KFS +   A+   + T+TG+W D RS  RW+       L IED
Sbjct: 243  RAVNRSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTY--ALFIED 300

Query: 432  PLQRSDNTARTVRKQHLNMISQVFDKTYHSLCEESPTRDNYKACLLGQRVV 280
            P ++ +N AR V   +L  I++ F  TYH L   +  R +    L+   ++
Sbjct: 301  PFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEIL 351


>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
            gi|296086183|emb|CBI31624.3| unnamed protein product
            [Vitis vinifera]
          Length = 453

 Score =  266 bits (679), Expect = 1e-68
 Identities = 150/331 (45%), Positives = 207/331 (62%), Gaps = 11/331 (3%)
 Frame = -2

Query: 1299 SYEELELAINDVLYLIKPSHKDHEVRKNLIVAFGALINSVIGLGDAKVEPFGSFLYNLYT 1120
            ++  LE+ + D+L +I PS +D  +R  LI  F   ++SV  L  A VEPFGSFL NLYT
Sbjct: 3    TFNVLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNLYT 62

Query: 1119 RKADLDLSVDVPSVILTQSAD------VLEDIRGALQNINV-PILNYVPEGRVPLLTFES 961
            +  DLD+S+++P+     SA       +L  +  AL++      L ++P  RVP++ FES
Sbjct: 63   QWGDLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKGGWRKLQFIPNARVPIIKFES 122

Query: 960  TKWNVTCDVTISNHSAQIKSKFLLWISKIDKRFCDMILLVKEWARAYDINNPKEGTLNSY 781
               N++CDV+I+N   Q+KSKFL WIS ID RF D++LLVKEWARA+DINN K GTLNSY
Sbjct: 123  YHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVKEWARAHDINNSKTGTLNSY 182

Query: 780  ALCLLVIFHLQTCVPAILPPLEEIYMGNI-NVHSSMVSTEESRIQRVCDTNIEKFM--SL 610
            +L LLV+FHLQTC PAILPPL+EIY GN+ +    + +  E +I+     NI +F     
Sbjct: 183  SLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRDRS 242

Query: 609  RTVNRSTLPQLMVSFFEKFSQLKGMASKHVMSTYTGKWEDRRS-CRWMEAHIYNKLIIED 433
            R  NRS+L +L +SF  KF  +   AS+  +  YTG+W D  S  RWM      +L +ED
Sbjct: 243  RAPNRSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTY--ELFVED 300

Query: 432  PLQRSDNTARTVRKQHLNMISQVFDKTYHSL 340
            P ++ +NTAR VR + L  IS+ F  T+  L
Sbjct: 301  PFEQPENTARGVRSRQLQRISEAFQTTHQRL 331


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
            gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
            polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  249 bits (637), Expect = 9e-64
 Identities = 141/322 (43%), Positives = 198/322 (61%), Gaps = 9/322 (2%)
 Frame = -2

Query: 1287 LELAINDVLYLIKPSHKDHEVRKNLIVAFGALINSVIGLGDAKVEPFGSFLYNLYTRKAD 1108
            L+  I D+L +++P   D   R  +I     ++ S+  L  A +EPFGSF+ NL++R  D
Sbjct: 6    LDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLFSRWGD 65

Query: 1107 LDLSVDVPSVILTQSAD------VLEDIRGALQ-NINVPILNYVPEGRVPLLTFESTKWN 949
            LDLSV + +   T +A       +L DI+ A + N     L  +P  RVP+L  E  + N
Sbjct: 66   LDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGRWYKLQLIPHARVPILKIEHIQHN 125

Query: 948  VTCDVTISNHSAQIKSKFLLWISKIDKRFCDMILLVKEWARAYDINNPKEGTLNSYALCL 769
            ++CD++I N   QIKSK LLW+++ID RF DM+LLVKEWA+A+DINN K+GT NSY+L L
Sbjct: 126  ISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLSL 185

Query: 768  LVIFHLQTCVPAILPPLEEIYMGNINVHSSMVSTE-ESRIQRVCDTNIEKFMSLRTVNRS 592
            LVIFH QTC PAI PPL +IY GN+  +   V  E E+ I R C TNI +F S RT NRS
Sbjct: 186  LVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCATNIARFKS-RTANRS 244

Query: 591  TLPQLMVSFFEKFSQLKGMASKHVMSTYTGKW-EDRRSCRWMEAHIYNKLIIEDPLQRSD 415
            +L +L VSF  KFS +   AS+  +  YTG+W +   + RW+       + +EDP ++ +
Sbjct: 245  SLSELFVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTY--AIFVEDPFEQPE 302

Query: 414  NTARTVRKQHLNMISQVFDKTY 349
            NTAR +  + L  IS+ F  T+
Sbjct: 303  NTARAINARQLMRISEAFRMTH 324


>ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like [Glycine max]
          Length = 415

 Score =  245 bits (625), Expect = 2e-62
 Identities = 136/334 (40%), Positives = 207/334 (61%), Gaps = 14/334 (4%)
 Frame = -2

Query: 1299 SYEELELAINDVLYLIKPSHKDHEVRKNLIVAFGALINSVIGLGDAKVEPFGSFLYNLYT 1120
            ++  L++ +ND+L ++ P  +D E+R  +I    +++ SV  L  A VEPFGSF+ NL+T
Sbjct: 3    THSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNLFT 62

Query: 1119 RKADLDLSVDVPSVILTQSA----------DVLEDIRGALQNINVPILNYVPEGRVPLLT 970
            R  DLD+S+++ + +   SA          DVL+ +R      N   L ++   RVP+L 
Sbjct: 63   RWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSN---LQFISNARVPILK 119

Query: 969  FESTKWNVTCDVTISNHSAQIKSKFLLWISKIDKRFCDMILLVKEWARAYDINNPKEGTL 790
            F+S +  V+CD++I+N   Q+KSK LLWI+KID RF  M+LLVKEWA+A+ INN K GT 
Sbjct: 120  FKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTF 179

Query: 789  NSYALCLLVIFHLQTCVPAILPPLEEIYMGN-INVHSSMVSTEESRIQRVCDTNIEKFMS 613
            NSY+L LLVIF+ QTC+PAI PPL++IY GN ++    + S  E+ I + CD NI +F+S
Sbjct: 180  NSYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFIS 239

Query: 612  --LRTVNRSTLPQLMVSFFEKFSQLKGMASKHVMSTYTGKWED-RRSCRWMEAHIYNKLI 442
               R++NR ++ +L V F  KF+++  MA K  +  Y+GKWE    +  W+       + 
Sbjct: 240  NRARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTY--AIF 297

Query: 441  IEDPLQRSDNTARTVRKQHLNMISQVFDKTYHSL 340
            +EDP ++  NTAR+V    L  I++ F +T+  L
Sbjct: 298  VEDPFEQPQNTARSVSAGQLKKITEAFARTHDLL 331


>ref|NP_001044790.1| Os01g0846500 [Oryza sativa Japonica Group]
            gi|56784029|dbj|BAD82657.1| unknown protein [Oryza sativa
            Japonica Group] gi|56784702|dbj|BAD81828.1| unknown
            protein [Oryza sativa Japonica Group]
            gi|113534321|dbj|BAF06704.1| Os01g0846500 [Oryza sativa
            Japonica Group] gi|222619532|gb|EEE55664.1| hypothetical
            protein OsJ_04062 [Oryza sativa Japonica Group]
          Length = 381

 Score =  243 bits (619), Expect = 1e-61
 Identities = 137/334 (41%), Positives = 196/334 (58%), Gaps = 10/334 (2%)
 Frame = -2

Query: 1299 SYEELELAINDVLYLIKPSHKDHEVRKNLIVAFGALINSVIGLGDAKVEPFGSFLYNLYT 1120
            +Y+ LE    D+L LIKP   D   R   I      I S   L  A V+PFGSF+  LY 
Sbjct: 8    NYDVLEKCTEDILSLIKPVEGDRNKRIYAIQELADTIYSAGALRGASVKPFGSFVSQLYA 67

Query: 1119 RKADLDLSVDVPSVI-----LTQSADVLEDIRGALQNINVPI-LNYVPEGRVPLLTFEST 958
            +  DLD+SV++ + +       +  D L ++R ALQ   +   + ++P  RVP+L + S 
Sbjct: 68   KSGDLDVSVELFNALNLPISKRKKQDTLREVRRALQKRGIARHMEFIPNARVPVLQYVSN 127

Query: 957  KWNVTCDVTISNHSAQIKSKFLLWISKIDKRFCDMILLVKEWARAYDINNPKEGTLNSYA 778
            ++ ++CD++ISN+  +IKSK   WI+ +D RF DM+LLVKEWA+A +IN+PK GTLNSY+
Sbjct: 128  QYGISCDISISNYPGRIKSKIFYWINTLDDRFGDMVLLVKEWAKAQNINDPKNGTLNSYS 187

Query: 777  LCLLVIFHLQTCVPAILPPLEEIYMGNINVH-SSMVSTEESRIQRVCDTNIEKF--MSLR 607
            LCLLV+FH QTC PAILPPL+EIY GNI    S      E  +  VC  NIE+F   ++ 
Sbjct: 188  LCLLVLFHFQTCEPAILPPLKEIYEGNIMEDISGRAYYNEKHLDEVCSINIERFRRQNMG 247

Query: 606  TVNRSTLPQLMVSFFEKFSQLKGMASKHVMSTYTGKWED-RRSCRWMEAHIYNKLIIEDP 430
              N+S+L  L+ SFF KF ++  ++ K V+STYTG+ E  + + RWM+      L +EDP
Sbjct: 248  QRNQSSLSHLLASFFHKFFRIDALSDK-VISTYTGRLERIQDNPRWMDKSY--SLFVEDP 304

Query: 429  LQRSDNTARTVRKQHLNMISQVFDKTYHSLCEES 328
             ++ DN AR V       I   F    +    ++
Sbjct: 305  FEKPDNAARAVGSFEFQDIVNAFSNASNKFVSDA 338