BLASTX nr result

ID: Cimicifuga21_contig00001820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001820
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA...   215   1e-53
ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA...   211   1e-52
ref|XP_003630120.1| Iron-sulfur assembly protein IscA [Medicago ...   210   2e-52
emb|CBI21524.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloropla...   207   3e-51

>ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Vitis vinifera]
          Length = 173

 Score =  215 bits (547), Expect = 1e-53
 Identities = 109/156 (69%), Positives = 119/156 (76%)
 Frame = -1

Query: 615 RNSLPVPKASVSISFRSSTRVLNLXXXXXXXXXXXXXXXXXXXXXXAISLTDSALSHLNK 436
           RNS  +P+ S S+S RS +  L+                       AISLTD+AL HLNK
Sbjct: 18  RNSNSMPQPSTSVSLRSLSSNLSFPKRFSIRSSSVSAAPTTGGLMPAISLTDNALKHLNK 77

Query: 435 MRSEKNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFVY 256
           MRS++ EDLCLRIGVKQGGCSGMSYTMEFE+RA  RPDDSIIEYNGFVIVCDPKSLLFV+
Sbjct: 78  MRSDRTEDLCLRIGVKQGGCSGMSYTMEFEDRAKTRPDDSIIEYNGFVIVCDPKSLLFVF 137

Query: 255 GMQLDFSSALIGGGFSFKNPNATQTCGCGKSFTAEM 148
           GMQLDFS ALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 138 GMQLDFSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173


>ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Cucumis sativus] gi|449515823|ref|XP_004164947.1|
           PREDICTED: iron-sulfur assembly protein IscA,
           chloroplastic-like [Cucumis sativus]
          Length = 174

 Score =  211 bits (537), Expect = 1e-52
 Identities = 99/109 (90%), Positives = 106/109 (97%)
 Frame = -1

Query: 474 ISLTDSALSHLNKMRSEKNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSIIEYNGF 295
           ISLTD+AL HLNKMRSE+NEDLCLRIGV+QGGCSGMSYTMEFE+RANARPDDSIIEYNGF
Sbjct: 66  ISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGF 125

Query: 294 VIVCDPKSLLFVYGMQLDFSSALIGGGFSFKNPNATQTCGCGKSFTAEM 148
           VIVCDPKSLLF++GMQLD+S ALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 126 VIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174


>ref|XP_003630120.1| Iron-sulfur assembly protein IscA [Medicago truncatula]
           gi|355524142|gb|AET04596.1| Iron-sulfur assembly protein
           IscA [Medicago truncatula] gi|388492974|gb|AFK34553.1|
           unknown [Medicago truncatula]
          Length = 178

 Score =  210 bits (535), Expect = 2e-52
 Identities = 107/156 (68%), Positives = 119/156 (76%), Gaps = 5/156 (3%)
 Frame = -1

Query: 600 VPKASVSISFRSSTRVLNLXXXXXXXXXXXXXXXXXXXXXXA-----ISLTDSALSHLNK 436
           VP    S+SFRSST +LN                             ISLTD+AL+HLNK
Sbjct: 23  VPITHTSLSFRSSTPILNRRFSPKPLSIRSLSVSASAAPASGAVAPAISLTDNALNHLNK 82

Query: 435 MRSEKNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFVY 256
           MRSE+++DLCLRIGVKQGGCSGMSYTM+FE+RANARPDDSIIEY GFVIVCDPKSLLFV+
Sbjct: 83  MRSERSQDLCLRIGVKQGGCSGMSYTMDFEDRANARPDDSIIEYKGFVIVCDPKSLLFVF 142

Query: 255 GMQLDFSSALIGGGFSFKNPNATQTCGCGKSFTAEM 148
           GMQLD+S ALIGGGF+FKNPNATQTCGCGKSF AEM
Sbjct: 143 GMQLDYSDALIGGGFNFKNPNATQTCGCGKSFNAEM 178


>emb|CBI21524.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  207 bits (527), Expect = 2e-51
 Identities = 98/109 (89%), Positives = 103/109 (94%)
 Frame = -1

Query: 474 ISLTDSALSHLNKMRSEKNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSIIEYNGF 295
           ISLTD+AL HLNKMRS++ EDLCLRIGVKQGGCSGMSYTMEFE+RA  RPDDSIIEYNGF
Sbjct: 42  ISLTDNALKHLNKMRSDRTEDLCLRIGVKQGGCSGMSYTMEFEDRAKTRPDDSIIEYNGF 101

Query: 294 VIVCDPKSLLFVYGMQLDFSSALIGGGFSFKNPNATQTCGCGKSFTAEM 148
           VIVCDPKSLLFV+GMQLDFS ALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 102 VIVCDPKSLLFVFGMQLDFSDALIGGGFSFKNPNATQTCGCGKSFAAEM 150


>ref|XP_002532181.1| Iron-sulfur assembly protein IscA, chloroplast precursor, putative
           [Ricinus communis] gi|223528129|gb|EEF30199.1|
           Iron-sulfur assembly protein IscA, chloroplast
           precursor, putative [Ricinus communis]
          Length = 178

 Score =  207 bits (526), Expect = 3e-51
 Identities = 95/109 (87%), Positives = 106/109 (97%)
 Frame = -1

Query: 474 ISLTDSALSHLNKMRSEKNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSIIEYNGF 295
           IS+T++AL+HLNKMR +++EDLCLRIGVKQGGCSGMSYTMEFENR+NARPDDS+IEYNGF
Sbjct: 70  ISVTENALNHLNKMRKDRDEDLCLRIGVKQGGCSGMSYTMEFENRSNARPDDSVIEYNGF 129

Query: 294 VIVCDPKSLLFVYGMQLDFSSALIGGGFSFKNPNATQTCGCGKSFTAEM 148
           VIVCDPKSLLFV+GMQLD+S ALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 130 VIVCDPKSLLFVFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 178


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