BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001777
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   206   1e-50
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   201   2e-49
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   189   9e-46
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   189   2e-45
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43

>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
            vinifera]
          Length = 317

 Score =  206 bits (523), Expect = 1e-50
 Identities = 137/310 (44%), Positives = 164/310 (52%), Gaps = 21/310 (6%)
 Frame = -3

Query: 1099 SDPRDYGSER----YALSGKIMLSAXXXXXXXXXXXXXLHIYARWFLAXXXXXXXXXXXX 932
            SDP D+ +      YALSGKIMLSA             LHIYARW+L             
Sbjct: 6    SDPEDWSANNAATGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARR 65

Query: 931  XXXRAHVIFTSDMPSTTHS-----HGLDASLLKSLPTFVFSSNTHQELLECAVCLSEFEE 767
                 H++F  D  +   S      GLDAS+L SLP FV+SS TH ++ ECAVCLSEFEE
Sbjct: 66   RH---HLVFYVDPTNPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSECAVCLSEFEE 122

Query: 766  NEKGRLLPKCNHSFHTACIDMWFHSHSTCPLCRSAVVSPDVIEPEKENTQIEIVIDSTNS 587
            NEKGR LPKCNHSFH  CIDMWFHSHSTCPLCRSA V+ +  E    N   ++VI    +
Sbjct: 123  NEKGRRLPKCNHSFHIGCIDMWFHSHSTCPLCRSA-VNAETSESASRN-PTDVVISMAET 180

Query: 586  QPSSNSAHTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAFEIVGVSIEVPRRN 407
            +  S SA                                  SRRK+ E+ GVSIEVPRRN
Sbjct: 181  EGGSTSA-------LCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRN 233

Query: 406  ESFKSLEEE----IQGGQVFKSPGGRILSFKRLMVRDRR-----PSTP-MSCSSA--IEI 263
            E+F   E+E        +V KSPG RILS KR++ RDR+      S P +SC S    E 
Sbjct: 234  ENFGLSEDESLLDSPATRVQKSPGSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEA 293

Query: 262  DLERGEIEEQ 233
            D+ERG  + Q
Sbjct: 294  DIERGTEDTQ 303


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
            vinifera]
          Length = 320

 Score =  201 bits (512), Expect = 2e-49
 Identities = 133/296 (44%), Positives = 158/296 (53%), Gaps = 17/296 (5%)
 Frame = -3

Query: 1069 YALSGKIMLSAXXXXXXXXXXXXXLHIYARWFLAXXXXXXXXXXXXXXXRAHVIFTSDMP 890
            YALSGKIMLSA             LHIYARW+L                  H++F  D  
Sbjct: 23   YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH---HLVFYVDPT 79

Query: 889  STTHS-----HGLDASLLKSLPTFVFSSNTHQELLECAVCLSEFEENEKGRLLPKCNHSF 725
            +   S      GLDAS+L SLP FV+SS TH ++ ECAVCLSEFEENEKGR LPKCNHSF
Sbjct: 80   NPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSECAVCLSEFEENEKGRRLPKCNHSF 139

Query: 724  HTACIDMWFHSHSTCPLCRSAVVSPDVIEPEKENTQIEIVIDSTNSQPSSNSAHTIXXXX 545
            H  CIDMWFHSHSTCPLCRSA V+ +  E    N   ++VI    ++  S SA       
Sbjct: 140  HIGCIDMWFHSHSTCPLCRSA-VNAETSESASRN-PTDVVISMAETEGGSTSA------- 190

Query: 544  XXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAFEIVGVSIEVPRRNESFKSLEEE----I 377
                                       SRRK+ E+ GVSIEVPRRNE+F   E+E     
Sbjct: 191  LCSTCQHDEDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNENFGLSEDESLLDS 250

Query: 376  QGGQVFKSPGGRILSFKRLMVRDRR-----PSTP-MSCSSA--IEIDLERGEIEEQ 233
               +V KSPG RILS KR++ RDR+      S P +SC S    E D+ERG  + Q
Sbjct: 251  PATRVQKSPGSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQ 306


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  189 bits (481), Expect = 9e-46
 Identities = 118/294 (40%), Positives = 152/294 (51%), Gaps = 17/294 (5%)
 Frame = -3

Query: 1069 YALSGKIMLSAXXXXXXXXXXXXXLHIYARWFLAXXXXXXXXXXXXXXXRAHVIFTSD-- 896
            +ALSGKIMLSA             LH YARW+L                  H++F  D  
Sbjct: 1    FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRN--HLVFYVDSA 58

Query: 895  ----MPSTTHSHGLDASLLKSLPTFVFSSNTHQELLECAVCLSEFEENEKGRLLPKCNHS 728
                + +T  + GL+ ++LKSLP FV+S  THQ+ +ECAVCLSEF+ENE GR LPKCNHS
Sbjct: 59   HNPTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDSMECAVCLSEFQENETGRTLPKCNHS 118

Query: 727  FHTACIDMWFHSHSTCPLCRSAVVSPDVIEPEKENTQIEIVIDSTNSQPSSNSAHTIXXX 548
            FH  CIDMWFHSHSTCPLCRS  V P    P ++     I +  + S   +   H     
Sbjct: 119  FHIGCIDMWFHSHSTCPLCRSP-VEPVTENPVQDGPGYGISVPGSGSSSGTMCQH----- 172

Query: 547  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAFEIVGVSIEVPRRNESF--KSLEEEIQ 374
                                         RRK  E++GV+IEVPRRN +F  +S  E   
Sbjct: 173  --------------EEDRVGSASTSSFNDRRKQMELIGVTIEVPRRNGNFEDESNTESPS 218

Query: 373  GGQVFKSPGGRILSFKRLMVRDRR------PSTPMSC---SSAIEIDLERGEIE 239
                F+SP  R+LSFKR++ R+RR       +T +SC   S   E+D+ERG+ E
Sbjct: 219  ASHAFRSPMSRMLSFKRMLSRERRGTASPNVATSVSCGGESGTTEMDVERGQDE 272


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
            gi|223544045|gb|EEF45571.1| ring finger protein, putative
            [Ricinus communis]
          Length = 292

 Score =  189 bits (479), Expect = 2e-45
 Identities = 120/284 (42%), Positives = 151/284 (53%), Gaps = 12/284 (4%)
 Frame = -3

Query: 1069 YALSGKIMLSAXXXXXXXXXXXXXLHIYARWFLAXXXXXXXXXXXXXXXRAHVIFTSDMP 890
            YALSGKIMLSA             LH+YARW+L                 AH+IF  D  
Sbjct: 18   YALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRR--AHLIFYVDPS 75

Query: 889  S----TTHSHGLDASLLKSLPTFVFSSNTHQELLECAVCLSEFEENEKGRLLPKCNHSFH 722
            +    T  S GLDA++L +LP F +SS TH + +ECAVCLSEFEENE+GR LPKCNHSFH
Sbjct: 76   NANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPIECAVCLSEFEENERGRTLPKCNHSFH 135

Query: 721  TACIDMWFHSHSTCPLCRSAVVSPDVIEPEKENTQIEIVIDSTNSQPSSNSAHTIXXXXX 542
              CIDMWFHSHSTCPLCRSAV      EP  E++   + ++S  ++  S +   +     
Sbjct: 136  IECIDMWFHSHSTCPLCRSAV------EPVPEDS---VRVNSEINETGSRAGLCV----- 181

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAFEIVGVSIEVPRRNESFKSLEEEIQGGQV 362
                                       RRK  E VGV+IEVPRRN  F+  E   +    
Sbjct: 182  -------TCQHEENRVDGVASTSSFNGRRKPAEFVGVTIEVPRRNGVFED-EPATESPSS 233

Query: 361  FKSPGGRILSFKRLMVRDRR-----PS---TPMSCSSAIEIDLE 254
            ++SP  R+LSF+R++ R+RR     PS   TP SC     ID+E
Sbjct: 234  YRSPMSRMLSFRRILSRERRGNASSPSSGITPASCGCGSSIDIE 277


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  181 bits (460), Expect = 2e-43
 Identities = 122/306 (39%), Positives = 151/306 (49%), Gaps = 20/306 (6%)
 Frame = -3

Query: 1096 DPRDYGSERYALSGKIMLSAXXXXXXXXXXXXXLHIYARWFLAXXXXXXXXXXXXXXXRA 917
            DP     E YALSGKIMLSA             LH+YARW+L                  
Sbjct: 7    DPPPEYREGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRR--T 64

Query: 916  HVIFTSDM---PSTTHSH---GLDASLLKSLPTFVFSSNTHQELLECAVCLSEFEENEKG 755
            H++F  D    P+   SH   GL+ ++  SLP FV+S  THQ+ +ECAVCLSEFEENE+G
Sbjct: 65   HLVFYVDSAQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSIECAVCLSEFEENERG 124

Query: 754  RLLPKCNHSFHTACIDMWFHSHSTCPLCRSAVVSPDVIEPEKENTQIE---IVIDSTNSQ 584
            R+LPKCNHSFHT CIDMWFHSHSTCPLCRS V      EP  EN   E     I    S 
Sbjct: 125  RVLPKCNHSFHTECIDMWFHSHSTCPLCRSPV------EPVAENPVPEGSNFGISEAGSG 178

Query: 583  PSSNSAHTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAFEIVGVSIEVPRRNE 404
              ++  H                                   RK   ++GV+I+VPRRN 
Sbjct: 179  LCTSCQH-------------------EEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNG 219

Query: 403  SF--KSLEEEIQGGQVFKSPGGRILSFKRLMVRDRR------PSTPMSC---SSAIEIDL 257
            +F  +S  E       F+SP  R+LSFKR++ R+RR       +  +SC   S   E D+
Sbjct: 220  NFEDESNTESPSASHSFRSPMSRMLSFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDI 279

Query: 256  ERGEIE 239
            E G  E
Sbjct: 280  EHGRDE 285