BLASTX nr result

ID: Cimicifuga21_contig00001750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001750
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinu...   424   e-116
gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]                       421   e-115
gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremu...   420   e-115
ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Popu...   419   e-115
gb|AEQ28765.1| expansin 3 [Prunus salicina]                           416   e-114

>ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinus communis]
           gi|223538342|gb|EEF39949.1| Alpha-expansin 1 precursor,
           putative [Ricinus communis]
          Length = 249

 Score =  424 bits (1090), Expect = e-116
 Identities = 204/249 (81%), Positives = 214/249 (85%), Gaps = 5/249 (2%)
 Frame = -1

Query: 959 MSFLGLFVVGFLSMVSYVNGYGGGGWANAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 780
           M+ L  F+VGFL+MVS VN YGGGGW NAHATFY             GYGNLYSQGYGTN
Sbjct: 1   MAPLVFFLVGFLAMVSSVNCYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 779 TAALSTAMFNNGLSCGSCYEIRCVNDPKWCLAGSIVVTATNFCPPNSN-----GGWCNPP 615
           TAALSTA+FN+GLSCGSCYEIRCVNDPKWCL GSIVVTATNFCPPN+      GGWCNPP
Sbjct: 61  TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 120

Query: 614 NQHFDLSQPVFQHIAQYRAGIVPVAYRRVQCRKRGGIRFTINGHSYFNLVLITNVGGAGD 435
            QHFDLSQPVFQHIAQYRAGIVPVAYRRV CR+RGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121 QQHFDLSQPVFQHIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 434 VHAVFIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVITSDGRFVLSNNVAPAGWSFG 255
           VHAV IKGSRTGWQAMSRNWGQNWQSN+YLNGQSLSFKV TSDGR V+S NVAP  WSFG
Sbjct: 181 VHAVAIKGSRTGWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSYNVAPVSWSFG 240

Query: 254 QTYSGGQFR 228
           QT+SG QFR
Sbjct: 241 QTFSGAQFR 249


>gb|ACK43223.1| alpha-expansin [Ziziphus jujuba]
          Length = 250

 Score =  421 bits (1081), Expect = e-115
 Identities = 203/251 (80%), Positives = 212/251 (84%), Gaps = 5/251 (1%)
 Frame = -1

Query: 965 MKMSFLGLFVVGFLSMVSYVNGYGGGGWANAHATFYXXXXXXXXXXXXXGYGNLYSQGYG 786
           MKM+  G F+VGFL M S V GYGGG W NAHATFY             GYGNLYSQGYG
Sbjct: 1   MKMALAGFFLVGFLGMFSSVCGYGGG-WINAHATFYGGGDASGTMGGACGYGNLYSQGYG 59

Query: 785 TNTAALSTAMFNNGLSCGSCYEIRCVNDPKWCLAGSIVVTATNFCPPNSN-----GGWCN 621
           TNTAALSTA+FNNGL CGSCYEIRCVNDPKWCL GSIVVTATNFCPPN+      GGWCN
Sbjct: 60  TNTAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCN 119

Query: 620 PPNQHFDLSQPVFQHIAQYRAGIVPVAYRRVQCRKRGGIRFTINGHSYFNLVLITNVGGA 441
           PP  HFDLSQPVFQHIAQY+AGIVPV+YRRV C +RGGIRFTINGHSYFNLVLITNVGGA
Sbjct: 120 PPQHHFDLSQPVFQHIAQYKAGIVPVSYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGA 179

Query: 440 GDVHAVFIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVITSDGRFVLSNNVAPAGWS 261
           GDVHAV IKGSRT WQAMSRNWGQNWQSN+YLNGQSLSFKV TSDGR V+SNNVAPAGWS
Sbjct: 180 GDVHAVAIKGSRTRWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSNNVAPAGWS 239

Query: 260 FGQTYSGGQFR 228
           FGQTYSG QFR
Sbjct: 240 FGQTYSGAQFR 250


>gb|AAR09170.1| alpha-expansin 3 [Populus tremula x Populus tremuloides]
          Length = 249

 Score =  420 bits (1080), Expect = e-115
 Identities = 197/249 (79%), Positives = 214/249 (85%), Gaps = 5/249 (2%)
 Frame = -1

Query: 959 MSFLGLFVVGFLSMVSYVNGYGGGGWANAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 780
           M+  G+F+VGFL+MVS V GYGGGGW NAHATFY             GYGNLYSQGYGTN
Sbjct: 1   MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 779 TAALSTAMFNNGLSCGSCYEIRCVNDPKWCLAGSIVVTATNFCPPNSN-----GGWCNPP 615
           TAALSTA+FN+GLSCGSC+EIRCVNDPKWCL GSIV+TATNFCPPN+      GGWCNPP
Sbjct: 61  TAALSTALFNSGLSCGSCFEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 614 NQHFDLSQPVFQHIAQYRAGIVPVAYRRVQCRKRGGIRFTINGHSYFNLVLITNVGGAGD 435
             HFDLSQPVFQHIAQYRAGIVPV+YRRV CR+RGGIRFT+NGHSYFNLVLITNVGGAGD
Sbjct: 121 QHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVGGAGD 180

Query: 434 VHAVFIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVITSDGRFVLSNNVAPAGWSFG 255
           VH+V IKGSRTGWQ MSRNWGQNWQSN+YLNGQSLSFKV TSDGR V+S NVAP+ WSFG
Sbjct: 181 VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFG 240

Query: 254 QTYSGGQFR 228
           QT+SG QFR
Sbjct: 241 QTFSGAQFR 249


>ref|XP_002315043.1| hypothetical protein POPTRDRAFT_659295 [Populus trichocarpa]
           gi|118488547|gb|ABK96086.1| unknown [Populus
           trichocarpa] gi|222864083|gb|EEF01214.1| hypothetical
           protein POPTRDRAFT_659295 [Populus trichocarpa]
          Length = 249

 Score =  419 bits (1077), Expect = e-115
 Identities = 197/249 (79%), Positives = 213/249 (85%), Gaps = 5/249 (2%)
 Frame = -1

Query: 959 MSFLGLFVVGFLSMVSYVNGYGGGGWANAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTN 780
           M+  G+F+VGFL+MVS V GYGGGGW NAHATFY             GYGNLYSQGYGTN
Sbjct: 1   MALAGIFLVGFLAMVSSVYGYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 779 TAALSTAMFNNGLSCGSCYEIRCVNDPKWCLAGSIVVTATNFCPPNSN-----GGWCNPP 615
           TAALSTA+FN+GLSCGSCYEIRCVNDPKWCL GSIV+TATNFCPPN+      GGWCNPP
Sbjct: 61  TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGWCNPP 120

Query: 614 NQHFDLSQPVFQHIAQYRAGIVPVAYRRVQCRKRGGIRFTINGHSYFNLVLITNVGGAGD 435
             HFDLSQPVFQHIAQ+RAGIVPV+YRRV CR+RGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121 QHHFDLSQPVFQHIAQFRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 434 VHAVFIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVITSDGRFVLSNNVAPAGWSFG 255
           VH+V IKGSRTGWQ MSRNWGQNWQSN+YLNGQSLSFKV TSDGR V+S N AP+ WSFG
Sbjct: 181 VHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 240

Query: 254 QTYSGGQFR 228
           QT+SG QFR
Sbjct: 241 QTFSGAQFR 249


>gb|AEQ28765.1| expansin 3 [Prunus salicina]
          Length = 252

 Score =  416 bits (1070), Expect = e-114
 Identities = 199/252 (78%), Positives = 211/252 (83%), Gaps = 6/252 (2%)
 Frame = -1

Query: 965 MKMSFL-GLFVVGFLSMVSYVNGYGGGGWANAHATFYXXXXXXXXXXXXXGYGNLYSQGY 789
           MKM+   G  +VG L+MVS  + YGGGGW NA ATFY             GYGNLYSQGY
Sbjct: 1   MKMALAYGFCLVGLLAMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGY 60

Query: 788 GTNTAALSTAMFNNGLSCGSCYEIRCVNDPKWCLAGSIVVTATNFCPPNSN-----GGWC 624
           GTNTAALSTA+FNNGL CGSCYEIRCVNDPKWCL G+IVVTATNFCPPN+      GGWC
Sbjct: 61  GTNTAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWC 120

Query: 623 NPPNQHFDLSQPVFQHIAQYRAGIVPVAYRRVQCRKRGGIRFTINGHSYFNLVLITNVGG 444
           NPP  HFDLSQPVFQHIAQYRAG+VPVAYRRV CR+RGGIRFTINGHSYFNLVLITNVGG
Sbjct: 121 NPPQHHFDLSQPVFQHIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGG 180

Query: 443 AGDVHAVFIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVITSDGRFVLSNNVAPAGW 264
           AGDVH+V +KGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKV TSDGR V+S N APAGW
Sbjct: 181 AGDVHSVSVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGW 240

Query: 263 SFGQTYSGGQFR 228
           SFGQTYSG QFR
Sbjct: 241 SFGQTYSGAQFR 252


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