BLASTX nr result

ID: Cimicifuga21_contig00001740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001740
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15799.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...    85   5e-15
emb|CAN75549.1| hypothetical protein VITISV_043541 [Vitis vinifera]    85   5e-15
ref|XP_002319433.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002533344.1| protein with unknown function [Ricinus commu...    77   2e-12

>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3    ALNCCQEDTDARPSMTDVVRELENIWYMMPESNTGPSDSGDFDPRKGTS-PSAISATKNP 179
            AL CCQEDTDARPSM  VVRELENIW MMPES+T  ++S   +P K  S PS+ + TKNP
Sbjct: 879  ALKCCQEDTDARPSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNP 938

Query: 180  YXXXXXXXXXXXXXXTPTIAPR 245
            Y               PTIAPR
Sbjct: 939  YVSSDISGSELVSGVVPTIAPR 960


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g06840-like [Vitis vinifera]
          Length = 959

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3    ALNCCQEDTDARPSMTDVVRELENIWYMMPESNTGPSDSGDFDPRKGTS-PSAISATKNP 179
            AL CCQEDTDARPSM  VVRELENIW MMPES+T  ++S   +P K  S PS+ + TKNP
Sbjct: 878  ALKCCQEDTDARPSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNP 937

Query: 180  YXXXXXXXXXXXXXXTPTIAPR 245
            Y               PTIAPR
Sbjct: 938  YVSSDISGSELVSGVVPTIAPR 959


>emb|CAN75549.1| hypothetical protein VITISV_043541 [Vitis vinifera]
          Length = 782

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   ALNCCQEDTDARPSMTDVVRELENIWYMMPESNTGPSDSGDFDPRKGTS-PSAISATKNP 179
           AL CCQEDTDARPSM  VVRELENIW MMPES+T  ++S   +P K  S PS+ + TKNP
Sbjct: 701 ALKCCQEDTDARPSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNP 760

Query: 180 YXXXXXXXXXXXXXXTPTIAPR 245
           Y               PTIAPR
Sbjct: 761 YVSSDISGSELVSGVVPTIAPR 782


>ref|XP_002319433.1| predicted protein [Populus trichocarpa] gi|222857809|gb|EEE95356.1|
            predicted protein [Populus trichocarpa]
          Length = 926

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3    ALNCCQEDTDARPSMTDVVRELENIWYMMPESNTGPSDSGDFDP-RKGTSPSAISATKNP 179
            A+ CC ++TD RPSM DVVRELEN+W+MMPES+T  +D+ + D   + TSPS+ S  KNP
Sbjct: 845  AMKCCNDETDERPSMIDVVRELENMWHMMPESDTKTTDTMNTDTGMEMTSPSSCSLLKNP 904

Query: 180  YXXXXXXXXXXXXXXTPTIAPR 245
            Y               PTI PR
Sbjct: 905  YVSSEVSSSDLVSGVAPTITPR 926


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
            gi|223526824|gb|EEF29043.1| protein with unknown function
            [Ricinus communis]
          Length = 844

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +3

Query: 3    ALNCCQEDTDARPSMTDVVRELENIWYMMPESNTGPSDSGDFDPRKGTSPSAISA--TKN 176
            AL CCQ++TDARPSM +VVRELE IW MMPES+T  +DS    P K  +P + S+   K+
Sbjct: 762  ALRCCQDETDARPSMAEVVRELETIWNMMPESDTKTTDSMSTAPEKTETPPSSSSMLVKH 821

Query: 177  PYXXXXXXXXXXXXXXTPTIAPR 245
            PY               PTI PR
Sbjct: 822  PYVSTDVSGSDLVSGVVPTITPR 844


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