BLASTX nr result

ID: Cimicifuga21_contig00001727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001727
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   435   e-119
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              432   e-119
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...   432   e-119
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]   422   e-116
ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...   415   e-113

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  435 bits (1118), Expect = e-119
 Identities = 207/292 (70%), Positives = 245/292 (83%)
 Frame = +3

Query: 117 SMEYHVDLGNLMAFDPHHHFPSVPSNREELAKECIQKATELVQAVANPLFNLPSRDDPDG 296
           + E+ +DLG+L+AFDP HHFPS PS+REEL KEC+QK TELVQ++A+ LFNLPS +D DG
Sbjct: 3   TQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDIDG 62

Query: 297 PLVHLPPPTMRLPREKHIPKPKPPTKWEVFAQXXXXXXXXXXXIVYDEQTASWKRRHGYD 476
           PLV LPPPT RLPREKH+PKPKPPTKWE+FA+           IVYDEQT +WKRRHGYD
Sbjct: 63  PLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYD 122

Query: 477 RVNDDKDVPIIEAKMTDEPGEDPFAKRQGEKRKRVEKQEKNRLGNLKQAAKVGALPSHVQ 656
           RVNDD+D+PIIEAKMTDE GEDPFAKR+ EK+KRVEKQ KNRL NLKQAAKVGALPSH+Q
Sbjct: 123 RVNDDEDIPIIEAKMTDEAGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKVGALPSHIQ 182

Query: 657 LAARSLPITGTQSAPRKASKDELENVXXXXXXXXXXXXKFDKKLPGEKPSKHPGKFRKFH 836
           LAA +LPITGTQ+AP+K SK+ELE+V            KFDKKLPGEKP KH GK+RKF 
Sbjct: 183 LAATALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGKYRKFL 242

Query: 837 PVAEGSGMGSQERQQTEKVLNKLMSKHSHEILNVNKAVTMFNVKKERKRKSK 992
           PV EG+G+GS E+QQTEK+LNKL+SK+SHEILNV+KA+ M+NVKKE+KRK++
Sbjct: 243 PVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNVKKEKKRKNR 294


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  432 bits (1112), Expect = e-119
 Identities = 206/292 (70%), Positives = 243/292 (83%)
 Frame = +3

Query: 117 SMEYHVDLGNLMAFDPHHHFPSVPSNREELAKECIQKATELVQAVANPLFNLPSRDDPDG 296
           + E+ +DLG+LMAFDP HHFPS P++REEL KEC+QK T LVQ +A+ LFNLPS +D DG
Sbjct: 3   TQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDG 62

Query: 297 PLVHLPPPTMRLPREKHIPKPKPPTKWEVFAQXXXXXXXXXXXIVYDEQTASWKRRHGYD 476
           PLV LPPP  RLPREKH+PKPKPPTKWE+FA+           IVYDEQT +WKRRHGYD
Sbjct: 63  PLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYD 122

Query: 477 RVNDDKDVPIIEAKMTDEPGEDPFAKRQGEKRKRVEKQEKNRLGNLKQAAKVGALPSHVQ 656
           RVNDDKD+PIIEAKMTDEPGEDPF KRQ EK+KRVEK EKNRL NLKQAAKVGALPSH+Q
Sbjct: 123 RVNDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQ 182

Query: 657 LAARSLPITGTQSAPRKASKDELENVXXXXXXXXXXXXKFDKKLPGEKPSKHPGKFRKFH 836
           LAA +LPITGTQ+AP+KASK+EL+++            KFDKKL GEKP KH GK+RKF 
Sbjct: 183 LAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFL 242

Query: 837 PVAEGSGMGSQERQQTEKVLNKLMSKHSHEILNVNKAVTMFNVKKERKRKSK 992
           PV EG+G+GSQE+QQTEKVLN+L+SK+SHEILNV+KA+ M+NVKKE+KRK++
Sbjct: 243 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQ 294


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera]
          Length = 331

 Score =  432 bits (1112), Expect = e-119
 Identities = 206/292 (70%), Positives = 243/292 (83%)
 Frame = +3

Query: 117 SMEYHVDLGNLMAFDPHHHFPSVPSNREELAKECIQKATELVQAVANPLFNLPSRDDPDG 296
           + E+ +DLG+LMAFDP HHFPS P++REEL KEC+QK T LVQ +A+ LFNLPS +D DG
Sbjct: 6   TQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDG 65

Query: 297 PLVHLPPPTMRLPREKHIPKPKPPTKWEVFAQXXXXXXXXXXXIVYDEQTASWKRRHGYD 476
           PLV LPPP  RLPREKH+PKPKPPTKWE+FA+           IVYDEQT +WKRRHGYD
Sbjct: 66  PLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYD 125

Query: 477 RVNDDKDVPIIEAKMTDEPGEDPFAKRQGEKRKRVEKQEKNRLGNLKQAAKVGALPSHVQ 656
           RVNDDKD+PIIEAKMTDEPGEDPF KRQ EK+KRVEK EKNRL NLKQAAKVGALPSH+Q
Sbjct: 126 RVNDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQ 185

Query: 657 LAARSLPITGTQSAPRKASKDELENVXXXXXXXXXXXXKFDKKLPGEKPSKHPGKFRKFH 836
           LAA +LPITGTQ+AP+KASK+EL+++            KFDKKL GEKP KH GK+RKF 
Sbjct: 186 LAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFL 245

Query: 837 PVAEGSGMGSQERQQTEKVLNKLMSKHSHEILNVNKAVTMFNVKKERKRKSK 992
           PV EG+G+GSQE+QQTEKVLN+L+SK+SHEILNV+KA+ M+NVKKE+KRK++
Sbjct: 246 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQ 297


>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
          Length = 327

 Score =  422 bits (1085), Expect = e-116
 Identities = 204/292 (69%), Positives = 241/292 (82%)
 Frame = +3

Query: 117 SMEYHVDLGNLMAFDPHHHFPSVPSNREELAKECIQKATELVQAVANPLFNLPSRDDPDG 296
           + E+ +DLG+LMAFDP HHFPS P++REEL KEC+QK T LVQ +A+ LFNLPS +D DG
Sbjct: 3   TQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDG 62

Query: 297 PLVHLPPPTMRLPREKHIPKPKPPTKWEVFAQXXXXXXXXXXXIVYDEQTASWKRRHGYD 476
           PLV LPPP  RLPREKH+PKPKPPTKWE+FA+           IVYDEQT +WKRRHGYD
Sbjct: 63  PLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYD 122

Query: 477 RVNDDKDVPIIEAKMTDEPGEDPFAKRQGEKRKRVEKQEKNRLGNLKQAAKVGALPSHVQ 656
           RVNDDKD+PIIEAKMTD  GEDPF KRQ EK+KRVEK EKNRL NLKQAAKVGALPSH+Q
Sbjct: 123 RVNDDKDJPIIEAKMTDA-GEDPFXKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQ 181

Query: 657 LAARSLPITGTQSAPRKASKDELENVXXXXXXXXXXXXKFDKKLPGEKPSKHPGKFRKFH 836
           LAA +LPITGTQ+AP+KASK+EL+++            KFDKKL GEKP KH GK+RKF 
Sbjct: 182 LAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFL 241

Query: 837 PVAEGSGMGSQERQQTEKVLNKLMSKHSHEILNVNKAVTMFNVKKERKRKSK 992
           PV EG+G+GSQE+QQTEKVLN+L+SK+SHEILNV+KA+ M+NVKKE+KRK++
Sbjct: 242 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQ 293


>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
           sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
           ribosome biogenesis regulatory protein homolog [Cucumis
           sativus]
          Length = 329

 Score =  415 bits (1067), Expect = e-113
 Identities = 197/291 (67%), Positives = 239/291 (82%)
 Frame = +3

Query: 126 YHVDLGNLMAFDPHHHFPSVPSNREELAKECIQKATELVQAVANPLFNLPSRDDPDGPLV 305
           + +DLG+LMAF+PHH FPS+PS+RE+L  EC+QK TELVQ++AN LFNLPS +D DGPLV
Sbjct: 9   FQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTEDRDGPLV 68

Query: 306 HLPPPTMRLPREKHIPKPKPPTKWEVFAQXXXXXXXXXXXIVYDEQTASWKRRHGYDRVN 485
            LPPPT RLPREK +PKPKPPTKWE+FAQ            VYDEQT +WKRRHGYDR N
Sbjct: 69  RLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRHGYDRAN 128

Query: 486 DDKDVPIIEAKMTDEPGEDPFAKRQGEKRKRVEKQEKNRLGNLKQAAKVGALPSHVQLAA 665
           D+ ++PIIEAKMTDE GEDPFA R+ +K+KRVEKQEKNRL NLKQAAKVGALPSH+QLAA
Sbjct: 129 DEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLAA 188

Query: 666 RSLPITGTQSAPRKASKDELENVXXXXXXXXXXXXKFDKKLPGEKPSKHPGKFRKFHPVA 845
            +LPITGTQ+AP+K +KDEL NV            KFDKK  GEKP+KH GK+RKF PV 
Sbjct: 189 TALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPVV 248

Query: 846 EGSGMGSQERQQTEKVLNKLMSKHSHEILNVNKAVTMFNVKKERKRKSKNE 998
           EG+G+GS+ER+QTEKVL++L+SK+SHEILNVNKAV M+NVKKE+K++++ +
Sbjct: 249 EGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQGK 299


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