BLASTX nr result

ID: Cimicifuga21_contig00001665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001665
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139219.1| PREDICTED: 40S ribosomal protein S24-2-like ...   239   5e-61
gb|ADN33912.1| 40S ribosomal protein s24 [Cucumis melo subsp. melo]   236   3e-60
ref|XP_004142519.1| PREDICTED: 40S ribosomal protein S24-2-like ...   234   2e-59
ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatu...   231   9e-59
gb|ADR71267.1| 40S ribosomal protein S24B [Hevea brasiliensis] g...   230   2e-58

>ref|XP_004139219.1| PREDICTED: 40S ribosomal protein S24-2-like [Cucumis sativus]
           gi|449482936|ref|XP_004156448.1| PREDICTED: 40S
           ribosomal protein S24-2-like [Cucumis sativus]
          Length = 137

 Score =  239 bits (610), Expect = 5e-61
 Identities = 121/123 (98%), Positives = 122/123 (99%)
 Frame = +1

Query: 100 MADGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGKIYDVKDPNAIFV 279
           MAD KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLG+IYDVKDPNAIFV
Sbjct: 1   MAD-KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFV 59

Query: 280 FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 459
           FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 119

Query: 460 RGV 468
           RGV
Sbjct: 120 RGV 122


>gb|ADN33912.1| 40S ribosomal protein s24 [Cucumis melo subsp. melo]
          Length = 137

 Score =  236 bits (603), Expect = 3e-60
 Identities = 119/123 (96%), Positives = 121/123 (98%)
 Frame = +1

Query: 100 MADGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGKIYDVKDPNAIFV 279
           MAD KAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL +IYDVKDPNAIFV
Sbjct: 1   MAD-KAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDPNAIFV 59

Query: 280 FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 459
           FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 119

Query: 460 RGV 468
           RGV
Sbjct: 120 RGV 122


>ref|XP_004142519.1| PREDICTED: 40S ribosomal protein S24-2-like [Cucumis sativus]
           gi|449518360|ref|XP_004166210.1| PREDICTED: 40S
           ribosomal protein S24-2-like [Cucumis sativus]
          Length = 137

 Score =  234 bits (596), Expect = 2e-59
 Identities = 119/123 (96%), Positives = 120/123 (97%)
 Frame = +1

Query: 100 MADGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGKIYDVKDPNAIFV 279
           MAD KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKL +IYDVKD NAIFV
Sbjct: 1   MAD-KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFV 59

Query: 280 FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 459
           FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 119

Query: 460 RGV 468
           RGV
Sbjct: 120 RGV 122


>ref|XP_003591024.1| 40S ribosomal protein S24 [Medicago truncatula]
           gi|217075254|gb|ACJ85987.1| unknown [Medicago
           truncatula] gi|355480072|gb|AES61275.1| 40S ribosomal
           protein S24 [Medicago truncatula]
           gi|388501578|gb|AFK38855.1| unknown [Medicago
           truncatula] gi|388521723|gb|AFK48923.1| unknown
           [Medicago truncatula]
          Length = 137

 Score =  231 bits (590), Expect = 9e-59
 Identities = 116/123 (94%), Positives = 119/123 (96%)
 Frame = +1

Query: 100 MADGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGKIYDVKDPNAIFV 279
           MAD KAVTIRTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELKEKL +IYDVKDPN +FV
Sbjct: 1   MAD-KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFV 59

Query: 280 FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 459
           FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRL+RNGLDTKVEKSRKQMKERKNRAKKI
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKI 119

Query: 460 RGV 468
           RGV
Sbjct: 120 RGV 122


>gb|ADR71267.1| 40S ribosomal protein S24B [Hevea brasiliensis]
           gi|313586515|gb|ADR71268.1| 40S ribosomal protein S24C
           [Hevea brasiliensis]
          Length = 137

 Score =  230 bits (587), Expect = 2e-58
 Identities = 114/123 (92%), Positives = 119/123 (96%)
 Frame = +1

Query: 100 MADGKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGKIYDVKDPNAIFV 279
           MAD KAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL  +Y+VKDPN IFV
Sbjct: 1   MAD-KAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLASLYEVKDPNTIFV 59

Query: 280 FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 459
           FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQ+KERKNRAKK+
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKV 119

Query: 460 RGV 468
           RGV
Sbjct: 120 RGV 122


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