BLASTX nr result
ID: Cimicifuga21_contig00001645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001645
(2126 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|2... 416 e-113
ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|2... 415 e-113
ref|XP_001770548.1| predicted protein [Physcomitrella patens sub... 410 e-112
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l... 404 e-110
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l... 404 e-110
>ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|222856975|gb|EEE94522.1|
predicted protein [Populus trichocarpa]
Length = 649
Score = 416 bits (1069), Expect = e-113
Identities = 218/429 (50%), Positives = 292/429 (68%)
Frame = +3
Query: 840 TSLYVCDLDSSVTETQLLDFFAQAGQVLSVKISRDHFTKASRGXXXXXXXXXXXXXXXXX 1019
+SLYV DL+ +V E QL D F+Q QV+S+++ RD +AS G
Sbjct: 33 SSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP-------- 84
Query: 1020 XXXXXXXXXLQDATNAMESLNFKPINGKSVRIMLSNRDSSIRKNGRANVFINGLESSIDS 1199
QDA+NAME LNF P+NGK++RIM+S+RD S+RK+G ANVFI L++SID+
Sbjct: 85 ----------QDASNAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDN 134
Query: 1200 EALHDVFSEFGTILSCKVATDFSGLSKGYGYVQFDKDEDAKKAIREMNGMVVNHRQVRVG 1379
+AL + F+ FG++LSCKVA D +G SKGYG+VQF+ +E A+ AI +NGM++N ++V VG
Sbjct: 135 KALQETFASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVG 194
Query: 1380 PFICKQXXXXXXXXXXXXTLYVKNLPDYPSDGFLEHFFSKYGEVLRALIVRDKCGCSKGF 1559
F+ Q +YVKNL + SD L+ FFS YG + A++++D+ G SKGF
Sbjct: 195 RFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGF 254
Query: 1560 GFVVFEEYEAAALAIEKVNGINYEGKVLYVGWAQSKSERQAELKSKFERERNNNLDNLQG 1739
GFV F+ ++AA A+EK+NG + KV YVG AQ K ER+AELK++FE+ERN+ + L+
Sbjct: 255 GFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKA 314
Query: 1740 SNLYVKNLDDSIHSEKLKELFSEFGMIRSCEVVVDSRGQSKGYGFVAFSSPGDASKAKKE 1919
+NLY+KNLDD I EKLKELFSEFG I SC+V++D +G SKG GFVAFS+P +AS+A
Sbjct: 315 ANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNG 374
Query: 1920 MNGKMIGGKPLYVAVAQRKEERKAMLQARFAQVESPPVTTAPFSTHAFHPVGPTRFGPQQ 2099
MNGKMIG KPLYVAVAQR+EERKA LQA F Q+++P ++ P +HP G R PQQ
Sbjct: 375 MNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLSPMPSGLPGYHP-GAPRLAPQQ 433
Query: 2100 QLVYFGGQG 2126
F GQG
Sbjct: 434 ---LFFGQG 439
>ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|222856974|gb|EEE94521.1|
predicted protein [Populus trichocarpa]
Length = 614
Score = 415 bits (1067), Expect = e-113
Identities = 218/429 (50%), Positives = 290/429 (67%)
Frame = +3
Query: 840 TSLYVCDLDSSVTETQLLDFFAQAGQVLSVKISRDHFTKASRGXXXXXXXXXXXXXXXXX 1019
+SLYV DL+ +V E QL D F+Q QV+S+++ RD +AS G
Sbjct: 23 SSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP-------- 74
Query: 1020 XXXXXXXXXLQDATNAMESLNFKPINGKSVRIMLSNRDSSIRKNGRANVFINGLESSIDS 1199
QDA NAME LNF P+NGK++RIM+S+RD S+RK+G ANVFI L++SID+
Sbjct: 75 ----------QDAANAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDN 124
Query: 1200 EALHDVFSEFGTILSCKVATDFSGLSKGYGYVQFDKDEDAKKAIREMNGMVVNHRQVRVG 1379
+AL + F+ FG +LSCKVA D +G SKGYG+VQF+ +E A+ AI +NGM++N ++V VG
Sbjct: 125 KALQETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVG 184
Query: 1380 PFICKQXXXXXXXXXXXXTLYVKNLPDYPSDGFLEHFFSKYGEVLRALIVRDKCGCSKGF 1559
F+ Q +YVKNL + SD L+ FFS YG + A++++D+ G SKGF
Sbjct: 185 RFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGF 244
Query: 1560 GFVVFEEYEAAALAIEKVNGINYEGKVLYVGWAQSKSERQAELKSKFERERNNNLDNLQG 1739
GFV F+ ++AA A+EK+NG + KV YVG AQ K ER+AELK++FE+ERN+ + L+
Sbjct: 245 GFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKA 304
Query: 1740 SNLYVKNLDDSIHSEKLKELFSEFGMIRSCEVVVDSRGQSKGYGFVAFSSPGDASKAKKE 1919
+NLY+KNLDD I EKLKELFSEFG I SC+V++D +G SKG GFVAFS+P +AS+A
Sbjct: 305 ANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNG 364
Query: 1920 MNGKMIGGKPLYVAVAQRKEERKAMLQARFAQVESPPVTTAPFSTHAFHPVGPTRFGPQQ 2099
MNGKMIG KPLYVAVAQR+EERKA LQA F Q+++P ++ P +HP G R PQQ
Sbjct: 365 MNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLSPMPSGLPGYHP-GAPRLAPQQ 423
Query: 2100 QLVYFGGQG 2126
F GQG
Sbjct: 424 ---LFFGQG 429
>ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 645
Score = 410 bits (1055), Expect = e-112
Identities = 220/442 (49%), Positives = 291/442 (65%)
Frame = +3
Query: 792 QQDQVKLNAVPKSLIMTSLYVCDLDSSVTETQLLDFFAQAGQVLSVKISRDHFTKASRGX 971
QQ P + + TSLYV DL+S+V+E QL + F+Q GQV+S+++ RD T+ S G
Sbjct: 8 QQAPAASGPAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGY 67
Query: 972 XXXXXXXXXXXXXXXXXXXXXXXXXLQDATNAMESLNFKPINGKSVRIMLSNRDSSIRKN 1151
QDAT A+E LNF +NGK +RIM S+RD SIRK+
Sbjct: 68 AYVNYNNA------------------QDATRALELLNFNAVNGKPIRIMFSHRDPSIRKS 109
Query: 1152 GRANVFINGLESSIDSEALHDVFSEFGTILSCKVATDFSGLSKGYGYVQFDKDEDAKKAI 1331
G AN+FI L+ SID++ALHD F+ FGTILSCKVATD SG SKGYG+VQF+++E A+ AI
Sbjct: 110 GTANIFIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAI 169
Query: 1332 REMNGMVVNHRQVRVGPFICKQXXXXXXXXXXXXTLYVKNLPDYPSDGFLEHFFSKYGEV 1511
++NGM++N +QV VGPF+ +Q +YVKNL D +D L+ F YG +
Sbjct: 170 EKVNGMLLNDKQVFVGPFVRRQERDQSGVVSKFNNVYVKNLADSTTDDELKKVFEAYGPI 229
Query: 1512 LRALIVRDKCGCSKGFGFVVFEEYEAAALAIEKVNGINYEGKVLYVGWAQSKSERQAELK 1691
A+++RD G SK FGFV FE + AA A+E +NG ++ K YVG AQ KSER+AEL+
Sbjct: 230 SSAVVMRDNEGKSKCFGFVNFEHADDAAKAVEALNGKKFDEKEWYVGRAQKKSEREAELR 289
Query: 1692 SKFERERNNNLDNLQGSNLYVKNLDDSIHSEKLKELFSEFGMIRSCEVVVDSRGQSKGYG 1871
+KFE+ER ++ QG NLY+KNLDD+I EKL+E+FSE+G I SC+V+ D +GQS+G G
Sbjct: 290 AKFEQERKERIEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSG 349
Query: 1872 FVAFSSPGDASKAKKEMNGKMIGGKPLYVAVAQRKEERKAMLQARFAQVESPPVTTAPFS 2051
FVAFSSP +A++A EMNGKM+G KPLYVA+AQRKEER+ LQA FAQ +P P S
Sbjct: 350 FVAFSSPDEATRAVTEMNGKMVGSKPLYVALAQRKEERRNRLQAAFAQ-RTPVGPAVPTS 408
Query: 2052 THAFHPVGPTRFGPQQQLVYFG 2117
+HP GP G + Y+G
Sbjct: 409 LPMYHPAGP---GMGPGMSYYG 427
>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 404 bits (1038), Expect = e-110
Identities = 230/462 (49%), Positives = 300/462 (64%), Gaps = 3/462 (0%)
Frame = +3
Query: 741 IYSSMA-SVSEPITPVSSQQDQVKLNAVPKSLIMTSLYVCDLDSSVTETQLLDFFAQAGQ 917
I S MA SV+ TPV + V L P SLYV DL+ +V E QL D F+Q Q
Sbjct: 5 ISSPMAQSVAAAATPVIAPG--VALGGGP--FANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 918 VLSVKISRDHFTKASRGXXXXXXXXXXXXXXXXXXXXXXXXXXLQDATNAMESLNFKPIN 1097
+ S+++ RD ++S G QDA+NAME LNF P+N
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANA------------------QDASNAMELLNFTPLN 102
Query: 1098 GKSVRIMLSNRDSSIRKNGRANVFINGLESSIDSEALHDVFSEFGTILSCKVATDFSGLS 1277
GK +RIM S RD SIRK+G NVFI L++SID++ALHD F+ FGT+LSCKVA D SG S
Sbjct: 103 GKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQS 162
Query: 1278 KGYGYVQFDKDEDAKKAIREMNGMVVNHRQVRVGPFICKQXXXXXXXXXXXXTLYVKNLP 1457
KGYG+VQFD +E A+ AI+ +NGM++N +QV VG FI +Q +YVKNL
Sbjct: 163 KGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLS 222
Query: 1458 DYPSDGFLEHFFSKYGEVLRALIVRDKCGCSKGFGFVVFEEYEAAALAIEKVNGINYEG- 1634
+ +D L+ F YG + A +++D G S+ FGFV F+ ++AA A+E++NG
Sbjct: 223 ETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINND 282
Query: 1635 KVLYVGWAQSKSERQAELKSKFERERNNNLDNLQGSNLYVKNLDDSIHSEKLKELFSEFG 1814
+VLYVG AQ K+ER+AELK+K E+ER + + LQG+NLY+KNLDDS EKLK+LFSEFG
Sbjct: 283 RVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFG 342
Query: 1815 MIRSCEVVVDSRGQSKGYGFVAFSSPGDASKAKKEMNGKMIGGKPLYVAVAQRKEERKAM 1994
I SC+V++DS G+SKG GFV+FS+P +ASKA EMNGK+IG KPLYVAVAQRKEERKA
Sbjct: 343 TITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Query: 1995 LQARFAQVESP-PVTTAPFSTHAFHPVGPTRFGPQQQLVYFG 2117
LQA+FAQ+ +P + P +HP G R PQQ +Y+G
Sbjct: 403 LQAQFAQIRAPGGMAPLPAGIPLYHP-GAPRLAPQQ--LYYG 441
>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 404 bits (1038), Expect = e-110
Identities = 230/462 (49%), Positives = 300/462 (64%), Gaps = 3/462 (0%)
Frame = +3
Query: 741 IYSSMA-SVSEPITPVSSQQDQVKLNAVPKSLIMTSLYVCDLDSSVTETQLLDFFAQAGQ 917
I S MA SV+ TPV + V L P SLYV DL+ +V E QL D F+Q Q
Sbjct: 5 ISSPMAQSVAAAATPVIAPG--VALGGGP--FANASLYVGDLEGNVNEEQLYDLFSQVAQ 60
Query: 918 VLSVKISRDHFTKASRGXXXXXXXXXXXXXXXXXXXXXXXXXXLQDATNAMESLNFKPIN 1097
+ S+++ RD ++S G QDA+NAME LNF P+N
Sbjct: 61 IASIRVCRDQTKRSSLGYAYVNFANA------------------QDASNAMELLNFTPLN 102
Query: 1098 GKSVRIMLSNRDSSIRKNGRANVFINGLESSIDSEALHDVFSEFGTILSCKVATDFSGLS 1277
GK +RIM S RD SIRK+G NVFI L++SID++ALHD F+ FGT+LSCKVA D SG S
Sbjct: 103 GKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQS 162
Query: 1278 KGYGYVQFDKDEDAKKAIREMNGMVVNHRQVRVGPFICKQXXXXXXXXXXXXTLYVKNLP 1457
KGYG+VQFD +E A+ AI+ +NGM++N +QV VG FI +Q +YVKNL
Sbjct: 163 KGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLS 222
Query: 1458 DYPSDGFLEHFFSKYGEVLRALIVRDKCGCSKGFGFVVFEEYEAAALAIEKVNGINYEG- 1634
+ +D L+ F YG + A +++D G S+ FGFV F+ ++AA A+E++NG
Sbjct: 223 ETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINND 282
Query: 1635 KVLYVGWAQSKSERQAELKSKFERERNNNLDNLQGSNLYVKNLDDSIHSEKLKELFSEFG 1814
+VLYVG AQ K+ER+AELK+K E+ER + + LQG+NLY+KNLDDS EKLK+LFSEFG
Sbjct: 283 RVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFG 342
Query: 1815 MIRSCEVVVDSRGQSKGYGFVAFSSPGDASKAKKEMNGKMIGGKPLYVAVAQRKEERKAM 1994
I SC+V++DS G+SKG GFV+FS+P +ASKA EMNGK+IG KPLYVAVAQRKEERKA
Sbjct: 343 TITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAH 402
Query: 1995 LQARFAQVESP-PVTTAPFSTHAFHPVGPTRFGPQQQLVYFG 2117
LQA+FAQ+ +P + P +HP G R PQQ +Y+G
Sbjct: 403 LQAQFAQIRAPGGMAPLPAGIPLYHP-GAPRLAPQQ--LYYG 441