BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001586
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   280   7e-73
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       264   5e-68
ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi...   241   3e-61
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   230   8e-58
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   228   3e-57

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  280 bits (716), Expect = 7e-73
 Identities = 155/302 (51%), Positives = 186/302 (61%), Gaps = 16/302 (5%)
 Frame = +3

Query: 147  MEFWGVEVKAGAPLKVEAGDNSVIHLSQASLGEVKKDKGNESVSLFLTIHGQKLVIGTLS 326
            MEFWGVEVKAG   KV++ D+ ++HLSQA+LGE KK+KGNESV LFL I  QKLV+GTL 
Sbjct: 1    MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 327  SEKIPQISYDLVLEKDFELSHNWKNGSIYFCGYRSLLDLSDD--ENTDSDIGDEFPVITX 500
               IPQ+S+DLV +K+FELSHNWKNGS++F GY+S+L   ++  E  DSD  ++ PV   
Sbjct: 61   PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLPVNAI 120

Query: 501  XXXXXXXXXXXV-------NAGKPKVKIVEPNKXXXXXXXXXXXXXXXXXXXXXXXXXXX 659
                               NAGK KVK+ EP K                           
Sbjct: 121  ENGKPEPKVEQAKAVPTNANAGKAKVKVEEPPKDAKDEEDDDDDSDEDMVDEDSDEDSDE 180

Query: 660  XXXXXXXXXXXXX-------TPKKAAEQGKKRPAESATKTPVPEKKAKLVTPEKTGPEGK 818
                                TPKK  E GKKRP ESATKTPVP KKAKLV+P+KT  +GK
Sbjct: 181  DIMSDAEDGSDEGSESEDEETPKKKVEPGKKRPTESATKTPVPAKKAKLVSPQKT--DGK 238

Query: 819  KGSVHVATPHPSKKAGKTSANNDKSKQQTPKSSGQIACKSCSKTFNSDGALQSHTKAKHS 998
            KG  H ATPHP+KKAGKT A+ DK K Q+PKS GQ++CKSCSKTFNS+ ALQSH+KAKH 
Sbjct: 239  KGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKHG 298

Query: 999  DS 1004
             S
Sbjct: 299  AS 300


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  264 bits (674), Expect = 5e-68
 Identities = 144/290 (49%), Positives = 179/290 (61%), Gaps = 3/290 (1%)
 Frame = +3

Query: 147  MEFWGVEVKAGAPLKVEAGDNSVIHLSQASLGEVKKDKGNESVSLFLTIHGQKLVIGTLS 326
            MEFWG EVK+G PL V+ GD+ V+HLSQASLGE KKDKG+E V L + + G+KL +GTL+
Sbjct: 1    MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 327  SEKIPQISYDLVLEKDFELSHNWKNGSIYFCGYRSLLDLSDDENTDSDIGDEFPVITXXX 506
             +K+PQ  +DLV ++DFELSHNWKNGS+YF GY++      +E  D D  DE   +T   
Sbjct: 61   LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEE--DEDESDEEIPLTLAN 118

Query: 507  XXXXXXXXXVN---AGKPKVKIVEPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 677
                      N   +GK KVKI EP+K                                 
Sbjct: 119  TGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDSD 178

Query: 678  XXXXXXXTPKKAAEQGKKRPAESATKTPVPEKKAKLVTPEKTGPEGKKGSVHVATPHPSK 857
                   TPKK AE  KKRP++SA KTP P+KKAK  TP+KT  +GKKG+VHVATPHPSK
Sbjct: 179  EDQSDEETPKK-AEPSKKRPSDSAIKTPAPDKKAKFATPQKT--DGKKGAVHVATPHPSK 235

Query: 858  KAGKTSANNDKSKQQTPKSSGQIACKSCSKTFNSDGALQSHTKAKHSDSK 1007
            +AGKTS N      QTPKS G +ACK+CS+TF S+ AL+SH+KAKHS  K
Sbjct: 236  QAGKTSGN---KSNQTPKSGGSLACKTCSRTFGSETALESHSKAKHSVGK 282


>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
           gi|222833604|gb|EEE72081.1| histone deacetylase [Populus
           trichocarpa]
          Length = 271

 Score =  241 bits (616), Expect = 3e-61
 Identities = 144/296 (48%), Positives = 174/296 (58%), Gaps = 12/296 (4%)
 Frame = +3

Query: 147 MEFWGVEVKAGAPLKVEAGDNSVIHLSQASLGEVKKDKGNESVSLFLTIHGQKLVIGTLS 326
           MEFWGVEVK G PL+VE+GD  ++HLSQA LGE KKDKGNESV LF+    QKLV+GTLS
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 327 SEKIPQISYDLVLEKDFELSHNWKNGSIYFCGYR--------SLLDLSDDENTDSDIGDE 482
            EKIPQI +DLV EKDFELSHN KNGS++F GY+        + ++   D   D  +   
Sbjct: 61  HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQPEYPFTQINFISDGEEDLPV--- 117

Query: 483 FPVITXXXXXXXXXXXXVNAGKP----KVKIVEPNKXXXXXXXXXXXXXXXXXXXXXXXX 650
            PV               NA KP    KVKIVEPNK                        
Sbjct: 118 -PVDNGKEEAKQPKPENENAAKPDSKQKVKIVEPNK-----------------DGKPKPE 159

Query: 651 XXXXXXXXXXXXXXXXTPKKAAEQGKKRPAESATKTPVPEKKAKLVTPEKTGPEGKKGSV 830
                           +    AE GKKR AESA+K PVP+KKAK VTP+KT  + KK  V
Sbjct: 160 NDDSSDEEDDSSDDGESSDDQAEVGKKRSAESASKNPVPDKKAKFVTPQKT--DLKKAGV 217

Query: 831 HVATPHPSKKAGKTSANNDKSKQQTPKSSGQIACKSCSKTFNSDGALQSHTKAKHS 998
           H+ATPHPSK+A KTSAN+ + K+Q  KS    +C SC+++F S+ ALQSH+KAKHS
Sbjct: 218 HIATPHPSKQAAKTSANSQR-KEQAQKS---FSCNSCNRSFGSENALQSHSKAKHS 269


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  230 bits (586), Expect = 8e-58
 Identities = 139/316 (43%), Positives = 171/316 (54%), Gaps = 29/316 (9%)
 Frame = +3

Query: 147  MEFWGVEVKAGAPLKVEAGDNSVIHLSQASLGEVKKDKGNESVSLFLTIHGQKLVIGTLS 326
            MEFWGVEVKAG PL+V  GD+ ++H+SQASLGE+KKDKGNE V L+  I GQKLV+GTLS
Sbjct: 1    MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 327  SEKIPQISYDLVLEKDFELSHNWKNGSIYFCGYRSLLDLSDDE-------NTDSDIGDEF 485
            +EK PQIS+DLV EK FELSHNWKNGS+YFCGY++ +  SD E       NT  D G   
Sbjct: 61   AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDLPHNTTVDNG--- 117

Query: 486  PVITXXXXXXXXXXXXVNAGKPKVKIVEPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 665
                             +A   +VKIVEPNK                             
Sbjct: 118  ------KPQQLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSED 171

Query: 666  XXXXXXXXXXXTPKKAAE----QGKKRPAESATKTPV---PEKK------AKLVTPEK-- 800
                         +   E    +  K       +TP    P KK      +K   P+K  
Sbjct: 172  EDMVNDRSASSEDEDDDENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTPVPDKKA 231

Query: 801  -------TGPEGKKGSVHVATPHPSKKAGKTSANNDKSKQQTPKSSGQIACKSCSKTFNS 959
                   TG + KK   HVATP+PSK+AGKT AN +K KQQ  KS G  +CKSC+++FNS
Sbjct: 232  KFVTPQKTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNS 291

Query: 960  DGALQSHTKAKHSDSK 1007
            + ALQSHTKAKH+ +K
Sbjct: 292  ENALQSHTKAKHTAAK 307


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
            deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
            gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
            chacoense]
          Length = 269

 Score =  228 bits (581), Expect = 3e-57
 Identities = 138/297 (46%), Positives = 173/297 (58%), Gaps = 10/297 (3%)
 Frame = +3

Query: 147  MEFWGVEVKAGAPLKVEAGDNSVIHLSQASLGEVKKDKGNESVSLFLTIHGQKLVIGTLS 326
            MEFWG EVK+G PL V+ GD  V+HLSQASLGE+KKDK +ESV L + I G+KLV+GTL+
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 327  SEKIPQISYDLVLEKDFELSHNWKNGSIYFCGYRSL--LDLSDDENTDSDIGDEFPVITX 500
            SEK+PQ  +DLV ++DFELSHN K+GS+YF GY++    +  +D+  D D  DE   +T 
Sbjct: 60   SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTL 119

Query: 501  XXXXXXXXXXXVN--------AGKPKVKIVEPNKXXXXXXXXXXXXXXXXXXXXXXXXXX 656
                                 +GK KV+IVEP K                          
Sbjct: 120  ANSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTK-------------DDEDESSDDDDSD 166

Query: 657  XXXXXXXXXXXXXXTPKKAAEQGKKRPAESATKTPVPEKKAKLVTPEKTGPEGKKGSVHV 836
                          TPKK AE  K+R A+SATKTPV +KKAKL TP+KT  +GKKG  HV
Sbjct: 167  MGEDEDDSDDSEEETPKK-AEPAKRRKADSATKTPVTDKKAKLTTPQKT--DGKKGGGHV 223

Query: 837  ATPHPSKKAGKTSANNDKSKQQTPKSSGQIACKSCSKTFNSDGALQSHTKAKHSDSK 1007
            ATPHPSK+A K           TPKS+G   CK C+++F S+GAL SH+KAKHS  K
Sbjct: 224  ATPHPSKQASK-----------TPKSAGSHHCKPCNRSFGSEGALDSHSKAKHSAGK 269