BLASTX nr result
ID: Cimicifuga21_contig00001585
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00001585 (1569 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315580.1| predicted protein [Populus trichocarpa] gi|2... 109 2e-21 ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257... 103 1e-19 emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] 102 2e-19 ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,... 87 9e-15 ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol... 84 1e-13 >ref|XP_002315580.1| predicted protein [Populus trichocarpa] gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa] Length = 459 Score = 109 bits (273), Expect = 2e-21 Identities = 59/91 (64%), Positives = 65/91 (71%), Gaps = 8/91 (8%) Frame = +3 Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDA--NSGYPNTAWRSDPSQ-GGS 632 YGAVGGR+G TPNSN G GG + Q +G GYMGSGY DA NSGY N AWRS+ SQ G+ Sbjct: 369 YGAVGGRSGGTPNSNVGGPGGAELQGSGGGYMGSGYGDANGNSGYGNAAWRSEQSQASGN 428 Query: 633 YGAGQTNGAPGGQVGY-SGYG----RQAQQQ 710 YGA Q NG GGQVGY GYG R+AQQQ Sbjct: 429 YGAPQANGPHGGQVGYGGGYGSSQARKAQQQ 459 >ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera] Length = 464 Score = 103 bits (258), Expect = 1e-19 Identities = 59/90 (65%), Positives = 63/90 (70%), Gaps = 7/90 (7%) Frame = +3 Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDAN--SGYPNTAWRSDPSQ-GGS 632 YGAVGGR GS PNSN GGG+ Q +G GYMG GY DAN SGY N AW+SDPSQ G+ Sbjct: 379 YGAVGGRTGSGPNSNA---GGGELQGSGGGYMGGGYGDANGNSGYGNAAWKSDPSQASGN 435 Query: 633 YGAGQTNGAPGGQVGYSG----YGRQAQQQ 710 YGA QTNG GGQVGY G RQAQQQ Sbjct: 436 YGA-QTNGPHGGQVGYGGGYSAQSRQAQQQ 464 >emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] Length = 464 Score = 102 bits (255), Expect = 2e-19 Identities = 58/90 (64%), Positives = 63/90 (70%), Gaps = 7/90 (7%) Frame = +3 Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDAN--SGYPNTAWRSDPSQ-GGS 632 YGAVGGR GS PNSN GGG+ Q +G GYMG GY DAN SGY N +W+SDPSQ G+ Sbjct: 379 YGAVGGRTGSGPNSNA---GGGELQGSGGGYMGGGYGDANGNSGYGNASWKSDPSQASGN 435 Query: 633 YGAGQTNGAPGGQVGYSG----YGRQAQQQ 710 YGA QTNG GGQVGY G RQAQQQ Sbjct: 436 YGA-QTNGPHGGQVGYGGGYSAQSRQAQQQ 464 >ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 470 Score = 87.4 bits (215), Expect = 9e-15 Identities = 52/91 (57%), Positives = 56/91 (61%), Gaps = 8/91 (8%) Frame = +3 Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDANS--GYPNTAWRSDPSQ-GGS 632 Y AVGGR+G PNSN GG+ Q +G GYMGS Y DAN GY WRSDPSQ G+ Sbjct: 383 YSAVGGRSGGAPNSNVGA--GGELQGSGGGYMGSDYGDANGNPGYGTAGWRSDPSQASGN 440 Query: 633 YGAGQTNGAPGGQVGY-SGYG----RQAQQQ 710 YG Q NG G QVGY GYG RQ QQQ Sbjct: 441 YGT-QANGPHGAQVGYGGGYGGAQARQGQQQ 470 >ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max] Length = 471 Score = 84.0 bits (206), Expect = 1e-13 Identities = 50/93 (53%), Positives = 58/93 (62%), Gaps = 10/93 (10%) Frame = +3 Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAG--AGYMGSGYNDA--NSGYPNTAWRSDPSQ-G 626 YG VGGR GS PN+N + +GG + +G YMG GY DA NSGY N AWRS+ + Sbjct: 382 YGTVGGRTGSAPNNNASASGGSELTSSGGSGNYMGGGYGDANGNSGYGNAAWRSEQTHAS 441 Query: 627 GSYGAGQTNGAPGGQVGYS-GYG----RQAQQQ 710 G+YG Q N GGQVGY GYG RQAQQQ Sbjct: 442 GNYGTPQGN---GGQVGYGVGYGGAQSRQAQQQ 471