BLASTX nr result

ID: Cimicifuga21_contig00001585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001585
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315580.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-21
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   103   1e-19
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]   102   2e-19
ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,...    87   9e-15
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol...    84   1e-13

>ref|XP_002315580.1| predicted protein [Populus trichocarpa] gi|222864620|gb|EEF01751.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  109 bits (273), Expect = 2e-21
 Identities = 59/91 (64%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
 Frame = +3

Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDA--NSGYPNTAWRSDPSQ-GGS 632
           YGAVGGR+G TPNSN  G GG + Q +G GYMGSGY DA  NSGY N AWRS+ SQ  G+
Sbjct: 369 YGAVGGRSGGTPNSNVGGPGGAELQGSGGGYMGSGYGDANGNSGYGNAAWRSEQSQASGN 428

Query: 633 YGAGQTNGAPGGQVGY-SGYG----RQAQQQ 710
           YGA Q NG  GGQVGY  GYG    R+AQQQ
Sbjct: 429 YGAPQANGPHGGQVGYGGGYGSSQARKAQQQ 459


>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  103 bits (258), Expect = 1e-19
 Identities = 59/90 (65%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = +3

Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDAN--SGYPNTAWRSDPSQ-GGS 632
           YGAVGGR GS PNSN    GGG+ Q +G GYMG GY DAN  SGY N AW+SDPSQ  G+
Sbjct: 379 YGAVGGRTGSGPNSNA---GGGELQGSGGGYMGGGYGDANGNSGYGNAAWKSDPSQASGN 435

Query: 633 YGAGQTNGAPGGQVGYSG----YGRQAQQQ 710
           YGA QTNG  GGQVGY G      RQAQQQ
Sbjct: 436 YGA-QTNGPHGGQVGYGGGYSAQSRQAQQQ 464


>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
          Length = 464

 Score =  102 bits (255), Expect = 2e-19
 Identities = 58/90 (64%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = +3

Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDAN--SGYPNTAWRSDPSQ-GGS 632
           YGAVGGR GS PNSN    GGG+ Q +G GYMG GY DAN  SGY N +W+SDPSQ  G+
Sbjct: 379 YGAVGGRTGSGPNSNA---GGGELQGSGGGYMGGGYGDANGNSGYGNASWKSDPSQASGN 435

Query: 633 YGAGQTNGAPGGQVGYSG----YGRQAQQQ 710
           YGA QTNG  GGQVGY G      RQAQQQ
Sbjct: 436 YGA-QTNGPHGGQVGYGGGYSAQSRQAQQQ 464


>ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223532245|gb|EEF34049.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 470

 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 52/91 (57%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +3

Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAGAGYMGSGYNDANS--GYPNTAWRSDPSQ-GGS 632
           Y AVGGR+G  PNSN     GG+ Q +G GYMGS Y DAN   GY    WRSDPSQ  G+
Sbjct: 383 YSAVGGRSGGAPNSNVGA--GGELQGSGGGYMGSDYGDANGNPGYGTAGWRSDPSQASGN 440

Query: 633 YGAGQTNGAPGGQVGY-SGYG----RQAQQQ 710
           YG  Q NG  G QVGY  GYG    RQ QQQ
Sbjct: 441 YGT-QANGPHGAQVGYGGGYGGAQARQGQQQ 470


>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
          Length = 471

 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 50/93 (53%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
 Frame = +3

Query: 462 YGAVGGRAGSTPNSNTAGTGGGDQQVAG--AGYMGSGYNDA--NSGYPNTAWRSDPSQ-G 626
           YG VGGR GS PN+N + +GG +   +G    YMG GY DA  NSGY N AWRS+ +   
Sbjct: 382 YGTVGGRTGSAPNNNASASGGSELTSSGGSGNYMGGGYGDANGNSGYGNAAWRSEQTHAS 441

Query: 627 GSYGAGQTNGAPGGQVGYS-GYG----RQAQQQ 710
           G+YG  Q N   GGQVGY  GYG    RQAQQQ
Sbjct: 442 GNYGTPQGN---GGQVGYGVGYGGAQSRQAQQQ 471


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