BLASTX nr result

ID: Cimicifuga21_contig00001546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001546
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69149.1| hypothetical protein VITISV_003948 [Vitis vinifera]   382   e-104
ref|XP_002283898.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isofo...   380   e-103
gb|ACM90324.1| GDP-D-mannose-3',5'-epimerase [Ribes nigrum]           379   e-103
ref|XP_004139232.1| PREDICTED: GDP-mannose 3,5-epimerase 1-like ...   377   e-102
ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Viti...   376   e-102

>emb|CAN69149.1| hypothetical protein VITISV_003948 [Vitis vinifera]
          Length = 376

 Score =  382 bits (980), Expect = e-104
 Identities = 181/194 (93%), Positives = 187/194 (96%)
 Frame = -3

Query: 583 MGNTDATKYGEYTYEQLERELYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 404
           MG+T+ T YGEYTYE L RE YWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK
Sbjct: 1   MGSTEGTTYGEYTYENLXREPYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60

Query: 403 KNEHMPEDMFCHEFHLADLRVMDNCMKVTSEVDHVFNLAADMGGMGFIQSNHSVIMYNNT 224
           KNEHMPEDMFCHEFHL DLRVMDNC+KVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 223 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 44
           MISFNMLEA+RINGVKRFFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 43  EELCKHYTKDFGIE 2
           EELCKHYTKDFGIE
Sbjct: 181 EELCKHYTKDFGIE 194


>ref|XP_002283898.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isoform 1 [Vitis vinifera]
           gi|359477586|ref|XP_003631999.1| PREDICTED: GDP-mannose
           3,5-epimerase 1 isoform 2 [Vitis vinifera]
          Length = 376

 Score =  380 bits (976), Expect = e-103
 Identities = 181/194 (93%), Positives = 186/194 (95%)
 Frame = -3

Query: 583 MGNTDATKYGEYTYEQLERELYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 404
           MG+T  T YGEYTYE LERE YWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK
Sbjct: 1   MGSTGGTTYGEYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60

Query: 403 KNEHMPEDMFCHEFHLADLRVMDNCMKVTSEVDHVFNLAADMGGMGFIQSNHSVIMYNNT 224
           KNEHMPEDMFCHEFHL DLRVMDNC+KVT+ V HVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVGHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 223 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 44
           MISFNMLEA+RINGVKRFFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 43  EELCKHYTKDFGIE 2
           EELCKHYTKDFGIE
Sbjct: 181 EELCKHYTKDFGIE 194


>gb|ACM90324.1| GDP-D-mannose-3',5'-epimerase [Ribes nigrum]
          Length = 376

 Score =  379 bits (972), Expect = e-103
 Identities = 180/194 (92%), Positives = 186/194 (95%)
 Frame = -3

Query: 583 MGNTDATKYGEYTYEQLERELYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 404
           MG+ D T YG YTYE LERELYWPSEKLRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSNDGTTYGAYTYENLERELYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 403 KNEHMPEDMFCHEFHLADLRVMDNCMKVTSEVDHVFNLAADMGGMGFIQSNHSVIMYNNT 224
           KNEHM E+MFC+EFHL DLRVMDNC+KVT +VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEEMFCNEFHLVDLRVMDNCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 223 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 44
           MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 180

Query: 43  EELCKHYTKDFGIE 2
           EELCKHYTKDFGIE
Sbjct: 181 EELCKHYTKDFGIE 194


>ref|XP_004139232.1| PREDICTED: GDP-mannose 3,5-epimerase 1-like [Cucumis sativus]
           gi|449482982|ref|XP_004156461.1| PREDICTED: GDP-mannose
           3,5-epimerase 1-like [Cucumis sativus]
          Length = 376

 Score =  377 bits (968), Expect = e-102
 Identities = 179/194 (92%), Positives = 184/194 (94%)
 Frame = -3

Query: 583 MGNTDATKYGEYTYEQLERELYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 404
           MG+   T YG YTY++LERE YWPSEKLRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 403 KNEHMPEDMFCHEFHLADLRVMDNCMKVTSEVDHVFNLAADMGGMGFIQSNHSVIMYNNT 224
           KNEHM EDMFCHEFHL DLRVMDNCMKVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCMKVTENVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 223 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 44
           MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 43  EELCKHYTKDFGIE 2
           EELCKHYTKDFGIE
Sbjct: 181 EELCKHYTKDFGIE 194


>ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Vitis vinifera]
          Length = 376

 Score =  376 bits (965), Expect = e-102
 Identities = 179/194 (92%), Positives = 185/194 (95%)
 Frame = -3

Query: 583 MGNTDATKYGEYTYEQLERELYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 404
           MG+ D T YG YTYE+LERE YW SEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK
Sbjct: 1   MGSNDGTTYGAYTYEELEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60

Query: 403 KNEHMPEDMFCHEFHLADLRVMDNCMKVTSEVDHVFNLAADMGGMGFIQSNHSVIMYNNT 224
           KNEHM EDMFCHEFHL DLRVMDNC+KVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 223 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 44
           MISFNMLEA+RINGVKRFFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 43  EELCKHYTKDFGIE 2
           EELCKHYTKDFGIE
Sbjct: 181 EELCKHYTKDFGIE 194


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