BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001539
         (2103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...   808   0.0  
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...   767   0.0  
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...   762   0.0  
gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]         732   0.0  
ref|XP_001769905.1| predicted protein [Physcomitrella patens sub...   712   0.0  

>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
            gi|297745752|emb|CBI15808.3| unnamed protein product
            [Vitis vinifera]
          Length = 568

 Score =  808 bits (2086), Expect = 0.0
 Identities = 426/562 (75%), Positives = 460/562 (81%), Gaps = 18/562 (3%)
 Frame = -3

Query: 1978 SYVPPHLRTSSFPSHVSSATRNKTNTFETLETDQHKLXXXXXXXXXXXXNGARRTSSSPP 1799
            SYVPPHLR    PS   S T   T T      D H+                   SSSP 
Sbjct: 2    SYVPPHLRN---PSSSISRTSKPTETSAVTLDDTHRTTNNLSYSSTNSHLSHSNASSSPS 58

Query: 1798 I------------------EPVFQQWKPSDRVFRLKPEQIEEVRLRLNVDVNVTSGSPPA 1673
            +                  EPVF QWKPSDRVF +KPEQIEEVRLRLNVDV V    PPA
Sbjct: 59   LSRWASSNAAAVPRTPSVPEPVFPQWKPSDRVFLMKPEQIEEVRLRLNVDVTVAPDLPPA 118

Query: 1672 PAPIESFADMCLHSSIMKDIAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFS 1493
            PAPIESF DM LH SIMKDI FHEYTRPT IQAQAMPVALSGRDLLGCAETGSGKTAAF+
Sbjct: 119  PAPIESFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFA 178

Query: 1492 IPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNMA 1313
            IPMIQHCLAQPP+RRGDGPLALVLAPTRELAQQIEKEVKAFSRSL+SFRTAIVVGGTN++
Sbjct: 179  IPMIQHCLAQPPVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNIS 238

Query: 1312 EQRSDLRAGINIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQN 1133
            EQRS+LRAG+NIVVATPGRFI HLQ+GNTSLSRISFVVLDEADRMLDMGFEPQIREVMQN
Sbjct: 239  EQRSELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQN 298

Query: 1132 LPKKHQTLLFSATMPVEIEALAQEYLTNPVQVKVGKVSSPTANVSQNLEKVAESDKIDRL 953
            LP+KHQTLLFSATMP+EIE LAQEYL NPVQVKVGKVS PTANVSQ LEKV+ES+KID L
Sbjct: 299  LPQKHQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGL 358

Query: 952  LALLVEEASQSERSGHPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQSEREAA 773
            LALLVEEASQ+ER G PFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQ+EREAA
Sbjct: 359  LALLVEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAA 418

Query: 772  LRDFRNGATDILVATDVASRGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATS 593
            LRDFRNGAT+ILVATDVASRGLDVTGVAHV+NLDLPK ME+YVHRIGRTGRAGSTGQATS
Sbjct: 419  LRDFRNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATS 478

Query: 592  LYTDRDMFLVAHIKKAISDVESGNTVAFATGXXXXXXXXXXXXXXXXXRNGLSKLPVVGP 413
             YTDRD+FLVAHI+KAI+DV SGNTVAFATG                 R  LS L ++GP
Sbjct: 479  FYTDRDVFLVAHIRKAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGP 538

Query: 412  TSINVEEKYKYMLAPANVKGEG 347
            TS+N+EEKY++M++P+++K EG
Sbjct: 539  TSLNIEEKYRFMMSPSSIKTEG 560


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 564

 Score =  767 bits (1981), Expect = 0.0
 Identities = 406/558 (72%), Positives = 460/558 (82%), Gaps = 13/558 (2%)
 Frame = -3

Query: 1978 SYVPPHLRTSSFPSHVSSATRNKTNTFET----LETDQH-KLXXXXXXXXXXXXN-GARR 1817
            SYVPPHLR S+  +  ++ T   T T  T    LE D   KL            + G+RR
Sbjct: 2    SYVPPHLRNSTATTTTTTTTTTTTTTTITSSITLENDHSTKLSTSTWKSLSSTLSNGSRR 61

Query: 1816 TSS---SPPI----EPVFQQWKPSDRVFRLKPEQIEEVRLRLNVDVNVTSGSPPAPAPIE 1658
            T++   SP      +PV  QW PS+RV RL  +Q+E+VR RLN++V V SGSPPAPAPIE
Sbjct: 62   TTAAFTSPRTLSVPDPVLPQWTPSERVLRLNSQQVEDVRARLNIEVTVASGSPPAPAPIE 121

Query: 1657 SFADMCLHSSIMKDIAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFSIPMIQ 1478
            SF DMCL+ +IMKDIA+H YTRPT IQ QAM V+LSGRDLL CAETGSGKTAAF+IPMIQ
Sbjct: 122  SFEDMCLNQNIMKDIAYHGYTRPTPIQVQAMTVSLSGRDLLACAETGSGKTAAFTIPMIQ 181

Query: 1477 HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNMAEQRSD 1298
            HCLAQ PIRRGDGPLALVLAPTRELAQQIEKEVK FSRSL+SFRTAIVVGGTN+A+QRS+
Sbjct: 182  HCLAQSPIRRGDGPLALVLAPTRELAQQIEKEVKCFSRSLDSFRTAIVVGGTNIADQRSE 241

Query: 1297 LRAGINIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPKKH 1118
            LRAG++I+VATPGRFIDHLQQGNTSLSRISF+VLDEADRMLDMGFEPQIREV+ NLP++H
Sbjct: 242  LRAGVDIMVATPGRFIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVLHNLPERH 301

Query: 1117 QTLLFSATMPVEIEALAQEYLTNPVQVKVGKVSSPTANVSQNLEKVAESDKIDRLLALLV 938
            QTLLFSATMP EIE LAQEYLT PVQVKVGKVS  TANVSQ L+KV+ES+KID LL LLV
Sbjct: 302  QTLLFSATMPEEIETLAQEYLTTPVQVKVGKVSGLTANVSQVLKKVSESEKIDCLLGLLV 361

Query: 937  EEASQSERSGHPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQSEREAALRDFR 758
            E+ASQ+ER+ HPFPLT+VFV+RK RCDEVAEALVAQGLRAVALHGGRSQ+EREAAL DFR
Sbjct: 362  EDASQAERADHPFPLTVVFVDRKARCDEVAEALVAQGLRAVALHGGRSQNEREAALHDFR 421

Query: 757  NGATDILVATDVASRGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATSLYTDR 578
            +G+TDILVATDVASRGLDVTGV HV+NLDLPKTMEDYVHR+GRTGRAGS GQATS YTDR
Sbjct: 422  SGSTDILVATDVASRGLDVTGVTHVINLDLPKTMEDYVHRVGRTGRAGSAGQATSFYTDR 481

Query: 577  DMFLVAHIKKAISDVESGNTVAFATGXXXXXXXXXXXXXXXXXRNGLSKLPVVGPTSINV 398
            D+FLVA IKKAI+DV+SGNTVAFATG                 RN LSKL  +GPTSIN+
Sbjct: 482  DLFLVAQIKKAIADVKSGNTVAFATGKVARRKEREAAASQKEARNDLSKL--LGPTSINI 539

Query: 397  EEKYKYMLAPANVKGEGV 344
            E+KY++M+A +N KGEGV
Sbjct: 540  EDKYRFMIASSNTKGEGV 557


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  762 bits (1968), Expect = 0.0
 Identities = 404/553 (73%), Positives = 455/553 (82%), Gaps = 9/553 (1%)
 Frame = -3

Query: 1978 SYVPPHLRTSSFPSHVSSATRNKTNTFETLETDQ--HKLXXXXXXXXXXXXNGARRTSS- 1808
            SY+PPHLR SS  + ++++  +     +T +     H              + +RR+S  
Sbjct: 2    SYIPPHLRNSSSNATITASRAHSVPPTDTNDHPNLSHSSSNFNTSSSTTFASPSRRSSGA 61

Query: 1807 -----SPPIEPVFQQWKPSDRVFRLKPEQIEEVRLRLNVDVNVTSGSPPAPAPIESFADM 1643
                 S P +PVF  W PSDRV R  P+QI E+R RLN+DV+V SGSP APA IESF DM
Sbjct: 62   FSRTISVP-QPVFPNWTPSDRVLRFNPDQIAEIRSRLNIDVSVASGSPLAPAAIESFEDM 120

Query: 1642 CLHSSIMKDIAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFSIPMIQHCLAQ 1463
            CLH SIMKDIA HEYTRPTSIQAQAM VALSGRDLLGCAETGSGKTAAF+IPMIQHCLAQ
Sbjct: 121  CLHQSIMKDIAHHEYTRPTSIQAQAMTVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 180

Query: 1462 PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNMAEQRSDLRAGI 1283
            P +RRGDGPLALVLAPTRELAQQIEKEVK FSRSLESFRTAIVVGGTN+A+QR +LRAG+
Sbjct: 181  PTVRRGDGPLALVLAPTRELAQQIEKEVKGFSRSLESFRTAIVVGGTNIADQRLELRAGV 240

Query: 1282 NIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPKKHQTLLF 1103
            +++VATPGR IDHLQQGNTSLSRISF+VLDEADRMLDMGFEPQIREVM+NLP+KHQTLLF
Sbjct: 241  DVIVATPGRLIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVMRNLPEKHQTLLF 300

Query: 1102 SATMPVEIEALAQEYLTNPVQVKVGKVSSPTANVSQNLEKVAESDKIDRLLALLVEEASQ 923
            SATMPVEIE L QEYLT+PVQV+VGKVSSPTANVSQ L KV+ES+KID LLALLVE+ASQ
Sbjct: 301  SATMPVEIETLTQEYLTSPVQVRVGKVSSPTANVSQILTKVSESEKIDCLLALLVEDASQ 360

Query: 922  SERSGHPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQSEREAALRDFRNGATD 743
            +ERS  PFPLTIVFVERKTRC+EVAEALVAQ L+AVALHGGRSQS+REAALRDFR+G+T 
Sbjct: 361  AERSNQPFPLTIVFVERKTRCNEVAEALVAQALQAVALHGGRSQSDREAALRDFRSGSTS 420

Query: 742  ILVATDVASRGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATSLYTDRDMFLV 563
            ILVATDVASRGLDVTGVAHV+NLDLPKTMEDYVHRIGRTGRAGSTGQATS YTD+D+FLV
Sbjct: 421  ILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDQDLFLV 480

Query: 562  AHIKKAISDVESGNTVAFATG-XXXXXXXXXXXXXXXXXRNGLSKLPVVGPTSINVEEKY 386
            A IKKAI+DVESGNTVAFATG                  RN  SK  V GP  IN+E+KY
Sbjct: 481  AQIKKAIADVESGNTVAFATGKTARRKEREAAAALHKEARNDPSK--VTGPACINIEDKY 538

Query: 385  KYMLAPANVKGEG 347
            ++M+AP+ +K EG
Sbjct: 539  RFMMAPSIIKSEG 551


>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
          Length = 622

 Score =  732 bits (1890), Expect = 0.0
 Identities = 387/557 (69%), Positives = 448/557 (80%), Gaps = 13/557 (2%)
 Frame = -3

Query: 1978 SYVPPHLRTSSFPSHVSSATRNKTNTFETLETDQHKLXXXXXXXXXXXXN-----GARRT 1814
            SYVPPHLR +S  + V++ TR   ++  TL+   H              +     G+RRT
Sbjct: 2    SYVPPHLRNASSTA-VATTTRPSASS-GTLDHHHHNTNLAFSSSYPHSNSSSLANGSRRT 59

Query: 1813 SSSPPI--------EPVFQQWKPSDRVFRLKPEQIEEVRLRLNVDVNVTSGSPPAPAPIE 1658
            S++           + VF  W+PS+RV R+ P+QIEEV +RLN+DV V+S S  AP PIE
Sbjct: 60   SAATSAISELVTVPDTVFPNWQPSERVSRMNPDQIEEV-VRLNLDVTVSSDSTAAPGPIE 118

Query: 1657 SFADMCLHSSIMKDIAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFSIPMIQ 1478
            SF DMCLH SIMKDIA+HEYTRP+SIQAQAMP+ALSGRDLLGCAETGSGKTAAF+IPM+Q
Sbjct: 119  SFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQ 178

Query: 1477 HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNMAEQRSD 1298
            HCL QPPIRRGDGPLALVLAPTRELAQQIEKEV+AFSRSLES +  IVVGGTN+ +QRS+
Sbjct: 179  HCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSE 238

Query: 1297 LRAGINIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPKKH 1118
            LRAG+ I VATPGRFIDHLQQGNTSLSRIS+VVLDEADRMLDMGFEPQIRE+M++LP+KH
Sbjct: 239  LRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKH 298

Query: 1117 QTLLFSATMPVEIEALAQEYLTNPVQVKVGKVSSPTANVSQNLEKVAESDKIDRLLALLV 938
            QTLLFSATMPVEIEALA+EYL NPVQVKVGKVSSPT NVSQ L KV+ S+KIDRLL LLV
Sbjct: 299  QTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVSGSEKIDRLLDLLV 358

Query: 937  EEASQSERSGHPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQSEREAALRDFR 758
            EEASQ+E+ GH FPLTIVFVERKTRCDEVAEALVAQGL AV+LHGG SQ+EREAAL++FR
Sbjct: 359  EEASQAEKCGHRFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFR 418

Query: 757  NGATDILVATDVASRGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATSLYTDR 578
            + +T ILVATDVASRGLDVTGV+HV+NLDLPKT EDY+HRIGRTGRAGSTG ATS YTDR
Sbjct: 419  SSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDR 478

Query: 577  DMFLVAHIKKAISDVESGNTVAFATGXXXXXXXXXXXXXXXXXRNGLSKLPVVGPTSINV 398
            DMFLV +I+KAI+D ESGN VAFATG                     S+   +G  SIN+
Sbjct: 479  DMFLVTNIRKAIADAESGNAVAFATGKVARRKEKEAAAAHKEANIASSRHLGLGAASINI 538

Query: 397  EEKYKYMLAPANVKGEG 347
            E+KY++M+A +N +GEG
Sbjct: 539  EDKYRFMIAASNSRGEG 555


>ref|XP_001769905.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|168034871|ref|XP_001769935.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|162678811|gb|EDQ65265.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|162678841|gb|EDQ65295.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 582

 Score =  712 bits (1838), Expect = 0.0
 Identities = 365/485 (75%), Positives = 413/485 (85%), Gaps = 2/485 (0%)
 Frame = -3

Query: 1795 EPVFQQWKPSDRVFRLKPEQIEEVRLRLNVDVNVTSGSPPAPAPIESFADMCLHSSIMKD 1616
            E V+  W+PS+RV +L+PEQI EVR RLNVDV + +GS PAPAPIESF DMCLH SIMKD
Sbjct: 90   EVVWATWQPSERVQKLQPEQIAEVRARLNVDVEIATGSEPAPAPIESFEDMCLHLSIMKD 149

Query: 1615 IAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFSIPMIQHCLAQPPIRRGDGP 1436
            + FH YT PT IQAQA+PVALSGRDLLGCAETGSGKTAAFS+PMIQHCLAQPPIRRGDGP
Sbjct: 150  VTFHNYTTPTPIQAQALPVALSGRDLLGCAETGSGKTAAFSLPMIQHCLAQPPIRRGDGP 209

Query: 1435 LALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNMAEQRSDLRAGINIVVATPGR 1256
            LALVLAPTRELAQQIEKEVKAF RS E FRTAIVVGGTN+ EQRS+LRAG+ IVVATPGR
Sbjct: 210  LALVLAPTRELAQQIEKEVKAFCRSAEGFRTAIVVGGTNIYEQRSELRAGVEIVVATPGR 269

Query: 1255 FIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPKKHQTLLFSATMPVEIE 1076
            FIDHLQQGN+SLSR+S+VVLDEADRMLDMGFEPQIREVM++LPKKHQTLLFSATMP EIE
Sbjct: 270  FIDHLQQGNSSLSRVSYVVLDEADRMLDMGFEPQIREVMRSLPKKHQTLLFSATMPEEIE 329

Query: 1075 ALAQEYLTNPVQVKVGKVSSPTANVSQNLEKVAESDKIDRLLALLVEEASQSERSGHPFP 896
            ALAQEYL NP++VKVG+VSSPTANV+QNLEK+ E +KI+ LLALLV+E SQS  +  P P
Sbjct: 330  ALAQEYLDNPIRVKVGRVSSPTANVTQNLEKITEKEKIESLLALLVDEHSQSLDTNQPPP 389

Query: 895  LTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQSEREAALRDFRNGATDILVATDVAS 716
            LTIVFVERK RCDEV +ALV QGL+A ALHGGRSQSEREAALRDFR G T+ILVATDVAS
Sbjct: 390  LTIVFVERKARCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVAS 449

Query: 715  RGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATSLYTDRDMFLVAHIKKAISD 536
            RGLDVTGVAHV+NLDLPKTMEDYVHRIGRTGRAG++G+ATS YT+RDMFLVA I++AI++
Sbjct: 450  RGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGASGRATSFYTERDMFLVAQIRRAITE 509

Query: 535  VESGNTVAFATGXXXXXXXXXXXXXXXXXRNGLSKLPVVGPTSINVEEKYKYMLAPA--N 362
             ESGN +AFATG                 R     +  +G T++ V++KYK+ML+ A   
Sbjct: 510  AESGNAMAFATGKAARRKEREQAAAFREGRVAPLGVAQIGATTVRVDDKYKHMLSAAADP 569

Query: 361  VKGEG 347
             KGEG
Sbjct: 570  KKGEG 574