BLASTX nr result

ID: Cimicifuga21_contig00001512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001512
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16894.3| unnamed protein product [Vitis vinifera]              192   3e-47
emb|CAN75612.1| hypothetical protein VITISV_022290 [Vitis vinifera]   192   3e-47
ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein ...   181   9e-44
ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein ...   181   9e-44
ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein ...   181   9e-44

>emb|CBI16894.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  192 bits (489), Expect = 3e-47
 Identities = 102/154 (66%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   WINEYYQRRPGLKILQERIDEYITSHE---EQARKDREARAAEGRWTVVVHQKGRKKTTD 173
           WI EY+Q RPGLKILQ+RIDE+IT+HE   EQARK+REARA+EG WTVVVH KGRKKTTD
Sbjct: 184 WIMEYHQSRPGLKILQQRIDEFITAHEAEEEQARKEREARASEGGWTVVVHHKGRKKTTD 243

Query: 174 AESGITVGGVAQAVVVDKMGKKKSKDVELDFYRFQKREAQRNDILNILNFFSLCYTLY*S 353
           +ESGI VG VAQA V+DKMGKKKSK++ L+FYRFQ+REAQRN                  
Sbjct: 244 SESGIAVGSVAQAAVMDKMGKKKSKEIGLNFYRFQRREAQRN------------------ 285

Query: 354 IAISIAEIVLLQSKFEQDKKWIQQLRAARKFCPY 455
                 E+++LQSKFEQDKK IQQLRAARKF PY
Sbjct: 286 ------ELMMLQSKFEQDKKRIQQLRAARKFRPY 313


>emb|CAN75612.1| hypothetical protein VITISV_022290 [Vitis vinifera]
          Length = 303

 Score =  192 bits (489), Expect = 3e-47
 Identities = 102/154 (66%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   WINEYYQRRPGLKILQERIDEYITSHE---EQARKDREARAAEGRWTVVVHQKGRKKTTD 173
           WI EY+Q RPGLKILQ+RIDE+IT+HE   EQARK+REARA+EG WTVVVH KGRKKTTD
Sbjct: 174 WIMEYHQSRPGLKILQQRIDEFITAHEAEEEQARKEREARASEGGWTVVVHHKGRKKTTD 233

Query: 174 AESGITVGGVAQAVVVDKMGKKKSKDVELDFYRFQKREAQRNDILNILNFFSLCYTLY*S 353
           +ESGI VG VAQA V+DKMGKKKSK++ L+FYRFQ+REAQRN                  
Sbjct: 234 SESGIAVGSVAQAAVMDKMGKKKSKEIGLNFYRFQRREAQRN------------------ 275

Query: 354 IAISIAEIVLLQSKFEQDKKWIQQLRAARKFCPY 455
                 E+++LQSKFEQDKK IQQLRAARKF PY
Sbjct: 276 ------ELMMLQSKFEQDKKRIQQLRAARKFRPY 303


>ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score =  181 bits (459), Expect = 9e-44
 Identities = 95/154 (61%), Positives = 112/154 (72%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   WINEYYQRRPGLKILQERIDEYITSHE---EQARKDREARAAEGRWTVVVHQKGRKKTTD 173
           WI EY++ RPGL +LQ+RID+YIT+HE   EQ +K+REA+AAEG WTVVVHQKGRKKTTD
Sbjct: 132 WITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 191

Query: 174 AESGITVGGVAQAVVVDKMGKKKSKDVELDFYRFQKREAQRNDILNILNFFSLCYTLY*S 353
           AESG+TVG VAQ  + DKM KKK  +V LDFYRFQ+REAQRN                  
Sbjct: 192 AESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN------------------ 233

Query: 354 IAISIAEIVLLQSKFEQDKKWIQQLRAARKFCPY 455
                 E+++LQSKFEQD+K IQQLRAARKF PY
Sbjct: 234 ------EVMMLQSKFEQDRKRIQQLRAARKFRPY 261


>ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 1 [Cucumis sativus]
          Length = 268

 Score =  181 bits (459), Expect = 9e-44
 Identities = 95/154 (61%), Positives = 112/154 (72%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   WINEYYQRRPGLKILQERIDEYITSHE---EQARKDREARAAEGRWTVVVHQKGRKKTTD 173
           WI EY++ RPGL +LQ+RID+YIT+HE   EQ +K+REA+AAEG WTVVVHQKGRKKTTD
Sbjct: 139 WITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 198

Query: 174 AESGITVGGVAQAVVVDKMGKKKSKDVELDFYRFQKREAQRNDILNILNFFSLCYTLY*S 353
           AESG+TVG VAQ  + DKM KKK  +V LDFYRFQ+REAQRN                  
Sbjct: 199 AESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN------------------ 240

Query: 354 IAISIAEIVLLQSKFEQDKKWIQQLRAARKFCPY 455
                 E+++LQSKFEQD+K IQQLRAARKF PY
Sbjct: 241 ------EVMMLQSKFEQDRKRIQQLRAARKFRPY 268


>ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score =  181 bits (459), Expect = 9e-44
 Identities = 95/154 (61%), Positives = 112/154 (72%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   WINEYYQRRPGLKILQERIDEYITSHE---EQARKDREARAAEGRWTVVVHQKGRKKTTD 173
           WI EY++ RPGL +LQ+RID+YIT+HE   EQ +K+REA+AAEG WTVVVHQKGRKKTTD
Sbjct: 132 WITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 191

Query: 174 AESGITVGGVAQAVVVDKMGKKKSKDVELDFYRFQKREAQRNDILNILNFFSLCYTLY*S 353
           AESG+TVG VAQ  + DKM KKK  +V LDFYRFQ+REAQRN                  
Sbjct: 192 AESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN------------------ 233

Query: 354 IAISIAEIVLLQSKFEQDKKWIQQLRAARKFCPY 455
                 E+++LQSKFEQD+K IQQLRAARKF PY
Sbjct: 234 ------EVMMLQSKFEQDRKRIQQLRAARKFRPY 261


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