BLASTX nr result

ID: Cimicifuga21_contig00001483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001483
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|1...   214   1e-53
ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|1...   211   8e-53
ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isofo...   211   1e-52
ref|XP_002306341.1| predicted protein [Populus trichocarpa] gi|1...   209   3e-52
ref|XP_003517345.1| PREDICTED: 60S ribosomal protein L26-1-like ...   209   6e-52

>ref|XP_002310593.1| predicted protein [Populus trichocarpa] gi|118483302|gb|ABK93553.1|
           unknown [Populus trichocarpa]
           gi|222853496|gb|EEE91043.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  214 bits (545), Expect = 1e-53
 Identities = 106/146 (72%), Positives = 118/146 (80%)
 Frame = +1

Query: 37  MKYNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPVRKDDEVQIVRG 216
           MKYNP           AHF+APSS+RR+LMSAPLS+DLR KYNVRS+P+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSLRRILMSAPLSTDLRQKYNVRSMPIRKDDEVQVVRG 60

Query: 217 TFKGREGKIVQVYRRKWVIHIERITREKVNGSTVDVGINPSKVVVTXXXXXXXXXXXXXX 396
           T+KGREGK+VQVYRRKWVIHIERITREKVNGSTV+VGINPSKVV+T              
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 397 XAKGRAVGDKEKGTKFTTEDILQNVD 474
            AKGRAVGDKEKGTKFT EDI+QNVD
Sbjct: 121 KAKGRAVGDKEKGTKFTAEDIMQNVD 146


>ref|XP_002304321.1| predicted protein [Populus trichocarpa] gi|118483998|gb|ABK93886.1|
           unknown [Populus trichocarpa]
           gi|222841753|gb|EEE79300.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  211 bits (538), Expect = 8e-53
 Identities = 103/146 (70%), Positives = 118/146 (80%)
 Frame = +1

Query: 37  MKYNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPVRKDDEVQIVRG 216
           MKYNP           AHF+APSSVRR+LMSAPLS+DLR KYNVRS+P+RKDDE+Q+VRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSTDLRQKYNVRSMPIRKDDEIQVVRG 60

Query: 217 TFKGREGKIVQVYRRKWVIHIERITREKVNGSTVDVGINPSKVVVTXXXXXXXXXXXXXX 396
           T+KGREGK+VQVYRRKWVIH+ERITREKVNGSTV+VGINPSKVV+T              
Sbjct: 61  TYKGREGKVVQVYRRKWVIHVERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 397 XAKGRAVGDKEKGTKFTTEDILQNVD 474
            AKGRAVGDK+KGTKFT EDI+Q+VD
Sbjct: 121 KAKGRAVGDKDKGTKFTAEDIMQSVD 146


>ref|XP_002284455.1| PREDICTED: 60S ribosomal protein L26-1 isoform 1 [Vitis vinifera]
           gi|359480547|ref|XP_003632488.1| PREDICTED: 60S
           ribosomal protein L26-1-like [Vitis vinifera]
           gi|359480553|ref|XP_003632490.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 2 [Vitis vinifera]
           gi|359480556|ref|XP_003632491.1| PREDICTED: 60S
           ribosomal protein L26-1 isoform 3 [Vitis vinifera]
           gi|147772865|emb|CAN75906.1| hypothetical protein
           VITISV_001974 [Vitis vinifera]
           gi|296087313|emb|CBI33687.3| unnamed protein product
           [Vitis vinifera] gi|296087319|emb|CBI33693.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  211 bits (537), Expect = 1e-52
 Identities = 105/146 (71%), Positives = 116/146 (79%)
 Frame = +1

Query: 37  MKYNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPVRKDDEVQIVRG 216
           MKYNP           AHFTAPSSVRRVLMSAPLS+DLRSKYN RS+P+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNARSMPIRKDDEVQVVRG 60

Query: 217 TFKGREGKIVQVYRRKWVIHIERITREKVNGSTVDVGINPSKVVVTXXXXXXXXXXXXXX 396
           TFKGREGK+VQVYRRKWVIH+ERITREKVNGSTV+VGINPSKVV+T              
Sbjct: 61  TFKGREGKVVQVYRRKWVIHVERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 397 XAKGRAVGDKEKGTKFTTEDILQNVD 474
            AKGRA  DK+KGTKFT EDI+Q+VD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146


>ref|XP_002306341.1| predicted protein [Populus trichocarpa] gi|118481457|gb|ABK92671.1|
           unknown [Populus trichocarpa]
           gi|222855790|gb|EEE93337.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  209 bits (533), Expect = 3e-52
 Identities = 105/146 (71%), Positives = 117/146 (80%)
 Frame = +1

Query: 37  MKYNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPVRKDDEVQIVRG 216
           MKYNP           AHF+APSS+RR+LMSAPLS+DLR KYNVRS+PVRKDDEVQ+VRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSLRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60

Query: 217 TFKGREGKIVQVYRRKWVIHIERITREKVNGSTVDVGINPSKVVVTXXXXXXXXXXXXXX 396
           T+KGREGK+VQVYRRKWVIHIERITREKVNGSTV+VGIN SKVV+T              
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINASKVVITKLRLDKDRKSLLDR 120

Query: 397 XAKGRAVGDKEKGTKFTTEDILQNVD 474
            AKGRAVGDKEKGTKFT EDI+Q+VD
Sbjct: 121 KAKGRAVGDKEKGTKFTAEDIMQSVD 146


>ref|XP_003517345.1| PREDICTED: 60S ribosomal protein L26-1-like [Glycine max]
          Length = 146

 Score =  209 bits (531), Expect = 6e-52
 Identities = 107/146 (73%), Positives = 115/146 (78%)
 Frame = +1

Query: 37  MKYNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPVRKDDEVQIVRG 216
           MK+NP           AHFTAPSSVRRVLMSAPLS+DLRSKYNVRSIPVRKDDEVQ+VRG
Sbjct: 1   MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSIPVRKDDEVQVVRG 60

Query: 217 TFKGREGKIVQVYRRKWVIHIERITREKVNGSTVDVGINPSKVVVTXXXXXXXXXXXXXX 396
           T+KGREGK+VQVYRRKWVIHIERITREKVNGSTV+VGI+PSKVVVT              
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRMDKDRKSLLDR 120

Query: 397 XAKGRAVGDKEKGTKFTTEDILQNVD 474
            AKGRA  DKEKGTKF  EDI+Q VD
Sbjct: 121 KAKGRAAADKEKGTKFAPEDIMQTVD 146


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