BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001474
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   165   3e-38
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   158   3e-36
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...   157   9e-36
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...   156   1e-35
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   155   2e-35

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  165 bits (418), Expect = 3e-38
 Identities = 124/377 (32%), Positives = 188/377 (49%), Gaps = 22/377 (5%)
 Frame = -3

Query: 1319 MAHIPHDIIIGILLRLPAKSLIRFRSVCKQWCDSIRDPSFIQTHLDRAIHEDSCNLFLAS 1140
            M+++P ++I  IL RL AK L+  R V K+W   I  P+FI  HL+ +I E  CNL +  
Sbjct: 1    MSNLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSI-ESPCNLSIIL 59

Query: 1139 KPCVCNKHESLYSPHTHIYSVEDDSFARKPVEIDIPFDLSFDSFNVLGTCNGLVCLGRR- 963
            K              + +YS+  D        +D P         +LG+CNGL+C+    
Sbjct: 60   KS-------------SELYSLSFDLLDNIQ-PLDHPLMCYNHGVKILGSCNGLLCICNIV 105

Query: 962  KVVCLFNPSTREYKISRFEEDLSFEFK----------DVYGLGYDQFNEDYKLVQF---- 825
              + L+NPS R +++  +   L  E K           V+G GYD  N+DYKLV+     
Sbjct: 106  DDIALWNPSIRAHRVVPY---LPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFG 162

Query: 824  -VDSKEFDSEVNVRSLNHSSCSTFSNIPYRILDRKELGIYLNGVLHWLGFSKDNPT--SK 654
             VD K F+SEV V SL  +S    +++PY +L   E GIY NG LHWL     + T    
Sbjct: 163  GVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDPDSTVADT 222

Query: 653  IISLDIKEKVFGEMPQP--VDKVDGITLGLLRGQLSVLCEFSTIGIEIWVMKSYGATDSW 480
            I++LD+  + +  +P+P  VD    + +G+L+G LS+L    +  +++WVM+ Y   +SW
Sbjct: 223  IVALDLGVEDYHVVPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESW 282

Query: 479  SKLFFIENSVLTLARAPWRTLCFPEKGKVLL--RDEKKLVTYDPKEKTVSNISYRGISWS 306
            SKLF +    +       + L + + G  +L   D   L  YD K K V N+  +G+   
Sbjct: 283  SKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGV--P 340

Query: 305  LLVRRMTYVGSLVPLKS 255
            +       VGSLVPL +
Sbjct: 341  ITFEAEICVGSLVPLNA 357


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
            gi|355511583|gb|AES92725.1| F-box family protein
            [Medicago truncatula]
          Length = 392

 Score =  158 bits (400), Expect = 3e-36
 Identities = 115/374 (30%), Positives = 183/374 (48%), Gaps = 23/374 (6%)
 Frame = -3

Query: 1319 MAHIPHDIIIGILLRLPAKSLIRFRSVCKQWCDSIRDPSFIQTHLDRAIHEDSCNLFLAS 1140
            MA +P ++   IL R+PAK L+R RS CK W + I    FI  HL ++   DS  +    
Sbjct: 1    MADLPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLHLSKS--RDSVIIL--- 55

Query: 1139 KPCVCNKHESLYSPHTHIYSVEDDSFARKPVEIDIPFDLSFDSFNVLGTCNGLVCLGR-R 963
                          H+ +Y ++ +S  R   E+D P     +   VLG+CNGL+C+    
Sbjct: 56   ------------RQHSRLYELDLNSMDRVK-ELDHPLMCYSNRIKVLGSCNGLLCICNIA 102

Query: 962  KVVCLFNPSTREYKISRFEEDLSFEFKD-----------VYGLGYDQFNEDYKLVQ---F 825
              +  +NP+ R+++I   E  +  E  +           VYG GYD   +DYKLV    F
Sbjct: 103  DDIAFWNPTIRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYF 162

Query: 824  VD--SKEFDSEVNVRSLNHSSCSTFSNIPYRILDRKELGIYLNGVLHWLGFSKDNPTSK- 654
            VD  ++ FDS V + ++      T  ++PY +   + +G++++G LHW+      P S+ 
Sbjct: 163  VDLHNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRD 222

Query: 653  -IISLDIKEKVFGE--MPQPVDKVDGITLGLLRGQLSVLCEFSTIGIEIWVMKSYGATDS 483
             I++ D++ +VF E  +P  VD    + + LLRG L ++    + G ++WVM+ YG+ DS
Sbjct: 223  LIVAFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDS 282

Query: 482  WSKLFFIENSVLTLARAPWRTLCFPEKGKVLL--RDEKKLVTYDPKEKTVSNISYRGISW 309
            W K+F +            + L +   G  +L  +D KKL  Y+   K VS +   GI  
Sbjct: 283  WCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNLASKDVSWVRISGIPN 342

Query: 308  SLLVRRMTYVGSLV 267
            S  +     VGSLV
Sbjct: 343  S--IEGTVCVGSLV 354


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score =  157 bits (396), Expect = 9e-36
 Identities = 118/377 (31%), Positives = 181/377 (48%), Gaps = 27/377 (7%)
 Frame = -3

Query: 1313 HIPHDIIIGILLRLPAKSLIRFRSVCKQWCDSIRDPSFIQTHLDRAIHEDSCNLFLASKP 1134
            H+P +++  IL RLP +SL+RFRS  K W   I        HL R++             
Sbjct: 4    HLPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQHLNWLHLTRSL------------- 50

Query: 1133 CVCNKHESLYSPHTHIYSVEDDSFARK------PVEIDIPFDLSFDSFNVLGTCNGLVCL 972
                   +L S  + I  V+ D +         PV ++ P     +S  +LG+CNGL+C+
Sbjct: 51   -------TLTSNTSLILRVDSDLYQTNFPTLDPPVSLNHPLMCYSNSITLLGSCNGLLCI 103

Query: 971  GR-RKVVCLFNPSTREYKI-------SRFEEDLSFEFKDVYGLGYDQFNEDYKLVQ---F 825
                  +  +NPS R+++I        R   D +     V G G+D    DYKLV+   F
Sbjct: 104  SNVADDIAFWNPSLRQHRILPYLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISYF 163

Query: 824  VD--SKEFDSEVNVRSLNHSSCSTFSNIPYRILDRKELGIYLNGVLHWLGFSKDNPTSK- 654
            VD   + FDS+V + +L  ++  T  ++PY +   + +G+++   LHW+   K  P    
Sbjct: 164  VDLHDRSFDSQVKLYTLRANAWKTLPSLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPD 223

Query: 653  -IISLDIKEKVFGEMPQP-VDKVDG---ITLGLLRGQLSVLCEFSTIGIEIWVMKSYGAT 489
             II+ D+   +F E+P P    VDG   I L LL G L +   F    I++WVM+ Y   
Sbjct: 224  LIIAFDLTHDIFRELPLPDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRR 283

Query: 488  DSWSKLFFIENSVLTLARAPWRTLCFPEKG-KVLL-RDEKKLVTYDPKEKTVSNISYRGI 315
            DSW K+F +E S    +    R L +   G KVLL  D K+L  YD ++K V+ +  +G+
Sbjct: 284  DSWCKVFTLEESREMRSLKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEVALVKIQGL 343

Query: 314  SWSLLVRRMTYVGSLVP 264
                L   M  +G+LVP
Sbjct: 344  --PNLNEAMICLGTLVP 358


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score =  156 bits (395), Expect = 1e-35
 Identities = 117/377 (31%), Positives = 182/377 (48%), Gaps = 28/377 (7%)
 Frame = -3

Query: 1313 HIPHDIIIGILLRLPAKSLIRFRSVCKQWCDSIRDPSFIQTHLDRAIHEDSCNLFLASKP 1134
            H+P +++  IL RLPAKSL+RFRS  K W   I    F   HL R++             
Sbjct: 4    HLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSL------------- 50

Query: 1133 CVCNKHESLYSPHTHIYSVEDDSFARKPVEIDIPFDLSF------DSFNVLGTCNGLVCL 972
                   SL S  T I  ++ D +      +D P  L+       ++  +LG+CNGL+C+
Sbjct: 51   -------SLTSNTTLILRLDSDLYQTNFPTLDPPLFLNHPLMCYSNNITLLGSCNGLLCI 103

Query: 971  GR-RKVVCLFNPSTREYKI--------SRFEEDLSFEFKDVYGLGYDQFNEDYKLVQ--- 828
                  +  +NPS R+++I         R   D +     VYG G+D  + DYKLV+   
Sbjct: 104  SNVADDIAFWNPSLRQHRILPSLPLPRRRLHPDTTLFAARVYGFGFDHTSPDYKLVRISY 163

Query: 827  FVD--SKEFDSEVNVRSLNHSSCSTFSNIPYRILDRKELGIYLNGVLHWLGFSKDNPTSK 654
            FVD   + FDS+V + +L  ++  T  ++PY +   + +G+++   LHW+   K  P   
Sbjct: 164  FVDLQDRSFDSQVKLYTLRANAWKTLPSMPYALCCARTMGVFVGNSLHWVVTRKLEPDQP 223

Query: 653  --IISLDIKEKVFGEMPQP-VDKVDG---ITLGLLRGQLSVLCEFSTIGIEIWVMKSYGA 492
              I++ D+  ++F E+P P    V G   I + LL   L +   F    +++WVM+ Y  
Sbjct: 224  DLIVAFDLTHEIFTELPLPDTGGVGGGFEIDVALLGDSLCMTVNFHNSKMDVWVMREYNR 283

Query: 491  TDSWSKLFFIENSVLTLARAPWRTLCFPEKG-KVLL-RDEKKLVTYDPKEKTVSNISYRG 318
             DSW KLF +E S    +    R L +   G KVLL  D K+L  YD  +K V+ +  +G
Sbjct: 284  GDSWCKLFTLEESRELRSFKCLRPLGYSSDGNKVLLEHDRKRLCWYDLGKKEVTLVRIQG 343

Query: 317  ISWSLLVRRMTYVGSLV 267
            +    L   M  +G+LV
Sbjct: 344  L--PNLNEAMICLGTLV 358


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  155 bits (393), Expect = 2e-35
 Identities = 120/386 (31%), Positives = 186/386 (48%), Gaps = 27/386 (6%)
 Frame = -3

Query: 1319 MAHIPHDIIIGILLRLPAKSLIRFRSVCKQWCDSIRDPSFIQTHLDRAIHEDSCNLFLAS 1140
            M+ +P ++I  IL RLPAK L+  RSV K WC  I  P+F++ HL  ++ + S NL++  
Sbjct: 1    MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSM-DTSSNLYIIL 59

Query: 1139 KPCVCNKHESLYSPHTHIYSVEDDSFARKPV---EIDIPFDLSFDSFNVLGTCNGLVCLG 969
            +           + H H    E +      V   E++ P         VLG+ NGL+C+ 
Sbjct: 60   RT----------TSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCIS 109

Query: 968  R-RKVVCLFNPSTREYKISRFEEDLSFEFKD----------VYGLGYDQFNEDYKLVQFV 822
                 + ++NPSTR++++  F   L  E K           V+G GYD   +DYKLV+  
Sbjct: 110  NVVDDIAVWNPSTRKHRVVPF---LPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIA 166

Query: 821  D-----SKEFDSEVNVRSLNHSSCSTFSNIPYRILDRKELGIYLNGVLHWLGFSKDNPTS 657
                   + F+SEV V SL   S     ++PY +      G++ NG LHW+    +NP S
Sbjct: 167  QFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWV--VGENPES 224

Query: 656  K----IISLDIKEKVFGEMPQP--VDKVDGITLGLLRGQLSVLCEFSTIGIEIWVMKSYG 495
                 +++LD+  + + E+ QP   DK   I LG+LRG L  L  F    +++W+MK YG
Sbjct: 225  NVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYG 284

Query: 494  ATDSWSKLFFIENSVLTLARAPWRTLCFPEKGKVLL--RDEKKLVTYDPKEKTVSNISYR 321
              +SW+KLF +    +       + L + + G  +L   D   L  YD K K V N    
Sbjct: 285  VKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIP 343

Query: 320  GISWSLLVRRMTYVGSLVPLKSGTYV 243
            GI +S      T+V SL+ +    ++
Sbjct: 344  GIPYSF--EADTFVESLISVSPNRHL 367