BLASTX nr result

ID: Cimicifuga21_contig00001468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001468
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83547.2| hypothetical protein, partial (mitochondrion) [N...   191   4e-47
ref|YP_003875494.1| transport membrane protein [Silene latifolia...   189   2e-46
gb|ADG85266.1| transport membrane protein [Silene latifolia]          189   2e-46
dbj|BAA99442.4| orfX [Beta vulgaris subsp. vulgaris]                  189   2e-46
ref|NP_064050.2| orfX gene product (mitochondrion) [Beta vulgari...   189   2e-46

>dbj|BAD83547.2| hypothetical protein, partial (mitochondrion) [Nicotiana tabacum]
          Length = 276

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/97 (97%), Positives = 96/97 (98%)
 Frame = +3

Query: 33  SRVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 212
           S VVPNVWHFLYF+GATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL
Sbjct: 140 SWVVPNVWHFLYFMGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 199

Query: 213 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 323
           RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA
Sbjct: 200 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 236


>ref|YP_003875494.1| transport membrane protein [Silene latifolia]
           gi|301338038|gb|ADK73330.1| transport membrane protein
           [Silene latifolia]
          Length = 264

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/97 (96%), Positives = 95/97 (97%)
 Frame = +3

Query: 33  SRVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 212
           S VVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL
Sbjct: 126 SWVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 185

Query: 213 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 323
           RGLSVETFTNNRRFLMVFSL TAALSTPPDIWCQI+A
Sbjct: 186 RGLSVETFTNNRRFLMVFSLLTAALSTPPDIWCQILA 222


>gb|ADG85266.1| transport membrane protein [Silene latifolia]
          Length = 256

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/97 (96%), Positives = 95/97 (97%)
 Frame = +3

Query: 33  SRVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 212
           S VVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL
Sbjct: 118 SWVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 177

Query: 213 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 323
           RGLSVETFTNNRRFLMVFSL TAALSTPPDIWCQI+A
Sbjct: 178 RGLSVETFTNNRRFLMVFSLLTAALSTPPDIWCQILA 214


>dbj|BAA99442.4| orfX [Beta vulgaris subsp. vulgaris]
          Length = 276

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/97 (96%), Positives = 95/97 (97%)
 Frame = +3

Query: 33  SRVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 212
           S VVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQ+PVIVICLLEL
Sbjct: 140 SWVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQLPVIVICLLEL 199

Query: 213 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 323
           RGLSVETFTNNRRFLMVFSL TAALSTPPDIWCQIVA
Sbjct: 200 RGLSVETFTNNRRFLMVFSLLTAALSTPPDIWCQIVA 236


>ref|NP_064050.2| orfX gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|87248046|gb|ABD36077.1| SecY-independent transporter
           protein [Beta vulgaris subsp. vulgaris]
          Length = 276

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/97 (96%), Positives = 95/97 (97%)
 Frame = +3

Query: 33  SRVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQVPVIVICLLEL 212
           S VVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQ+PVIVICLLEL
Sbjct: 140 SWVVPNVWHFLYFVGATSTNLLMIKLQPKIYDYIMLTVRILFISSVCSQLPVIVICLLEL 199

Query: 213 RGLSVETFTNNRRFLMVFSLFTAALSTPPDIWCQIVA 323
           RGLSVETFTNNRRFLMVFSL TAALSTPPDIWCQIVA
Sbjct: 200 RGLSVETFTNNRRFLMVFSLLTAALSTPPDIWCQIVA 236


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