BLASTX nr result

ID: Cimicifuga21_contig00001427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001427
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g3065...    89   3e-16
gb|ABK94331.1| unknown [Populus trichocarpa]                           89   4e-16
ref|XP_002308410.1| stress-induced hydrophobic peptide [Populus ...    87   1e-15
gb|ABK93775.1| unknown [Populus trichocarpa]                           87   1e-15
ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g3066...    86   2e-15

>ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g30650 [Vitis vinifera]
           gi|147791950|emb|CAN64139.1| hypothetical protein
           VITISV_004807 [Vitis vinifera]
           gi|147805308|emb|CAN73911.1| hypothetical protein
           VITISV_002031 [Vitis vinifera]
           gi|297743660|emb|CBI36543.3| unnamed protein product
           [Vitis vinifera]
          Length = 72

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/74 (56%), Positives = 50/74 (67%)
 Frame = -2

Query: 276 MTSGAALCCEIVLAILLPPLGVCFRHGCCSVEFFICLVLTILGYIPGXXXXXXXXXXXXX 97
           M +   + CEI++AILLPP+GVCFRHGCCSVEF ICL+LT+LGYIPG             
Sbjct: 1   MATRCEIFCEILIAILLPPVGVCFRHGCCSVEFCICLLLTLLGYIPGIIYALYVIVFVDR 60

Query: 96  NDDPRPDYWRPINA 55
             DP   YWRP+NA
Sbjct: 61  --DPDDYYWRPLNA 72


>gb|ABK94331.1| unknown [Populus trichocarpa]
          Length = 77

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -2

Query: 276 MTSGAALCCEIVLAILLPPLGVCFRHGCCSVEFFICLVLTILGYIPG 136
           M S   +CCEI++AILLPPLGVCFRHGCCSVEF+ICL+LTILGY+PG
Sbjct: 1   MPSRCEICCEIIIAILLPPLGVCFRHGCCSVEFWICLLLTILGYVPG 47


>ref|XP_002308410.1| stress-induced hydrophobic peptide [Populus trichocarpa]
           gi|222854386|gb|EEE91933.1| stress-induced hydrophobic
           peptide [Populus trichocarpa]
          Length = 73

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -2

Query: 276 MTSGAALCCEIVLAILLPPLGVCFRHGCCSVEFFICLVLTILGYIPG 136
           M S   +CCEI++AILLPPLGVCFRHGCCSVEF ICL+LTILGY+PG
Sbjct: 1   MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPG 47


>gb|ABK93775.1| unknown [Populus trichocarpa]
          Length = 75

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -2

Query: 276 MTSGAALCCEIVLAILLPPLGVCFRHGCCSVEFFICLVLTILGYIPG 136
           M S   +CCEI++AILLPPLGVCFRHGCCSVEF ICL+LTILGY+PG
Sbjct: 1   MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPG 47


>ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g30660 [Glycine max]
           gi|255628505|gb|ACU14597.1| unknown [Glycine max]
          Length = 75

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 276 MTSGAALCCEIVLAILLPPLGVCFRHGCCSVEFFICLVLTILGYIPG 136
           M +   +CCEI++AIL+PPLGVCFRHGCCSVEF ICL+LTILGYIPG
Sbjct: 1   MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGYIPG 47


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