BLASTX nr result

ID: Cimicifuga21_contig00001420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001420
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   250   3e-64
ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   248   1e-63
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...   247   3e-63
ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   247   3e-63
gb|ABK94888.1| unknown [Populus trichocarpa]                          244   3e-62

>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score =  250 bits (639), Expect = 3e-64
 Identities = 133/215 (61%), Positives = 154/215 (71%), Gaps = 16/215 (7%)
 Frame = +3

Query: 159 MPKVYPNVVIPPPQAQKPASKG---------QVQVLTVWRKSLLFNCKGFTVFDAKGNLV 311
           M KVYPN       A    S+G            VLTVW+KSLLFNC GFTVFD KGNLV
Sbjct: 1   MTKVYPNAT-----AASCGSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLV 55

Query: 312 FRVDNYLASNKAEILLMDATGNPLLTIRRKKLTLADNWVVFDGETNVNPLYTVKKHVNFL 491
           FRVDNY+A +K EI+LMDA+G PLLTIRRK+L+L DNW+V+DGET  NP + V+KH N L
Sbjct: 56  FRVDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLL 115

Query: 492 NSRLLAQVTSRGNNG-------SNKNVLYQIEGSYVQRCCMVYDEKRNVVAEIKRKEPVG 650
           NS+ LA+V+  G  G       S +N +Y+IEGSY QRCC VYDE R  VAEIKRKE V 
Sbjct: 116 NSKSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVA 175

Query: 651 GVSFGVDVFRLVVQQKMDPTVAMALVILLEQMFGS 755
           GV+ GVDVFRLVVQ +MD  VAMALVILL+QMFGS
Sbjct: 176 GVALGVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|296089330|emb|CBI39102.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  248 bits (634), Expect = 1e-63
 Identities = 125/200 (62%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
 Frame = +3

Query: 159 MPKVYPNVVIPPPQAQKPA---SKGQVQVLTVWRKSLLFNCKGFTVFDAKGNLVFRVDNY 329
           M KVYPN       ++        G   VLTVW+KSLLFNC GFTVFD KGNLVFRVDNY
Sbjct: 1   MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 330 LASNKAEILLMDATGNPLLTIRRKKLTLADNWVVFDGETNVNPLYTVKKHVNFLNSRLLA 509
           +A NK EI+LMDA+G PLLTIRRK+L+L DNW+V+DGET  NP + ++KH+N L+S+ LA
Sbjct: 61  VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 510 QVTSRGNNGSNKNVLYQIEGSYVQRCCMVYDEKRNVVAEIKRKEPVGGVSFGVDVFRLVV 689
           +V S G++ S +  +Y+IEGSY QRCC VYDE+R  VAEIKRKE + GV+ GVDVFRL+V
Sbjct: 121 RV-SGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIV 179

Query: 690 QQKMDPTVAMALVILLEQMF 749
           Q +MD  VAMALVILL+QMF
Sbjct: 180 QPEMDTPVAMALVILLDQMF 199


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score =  247 bits (631), Expect = 3e-63
 Identities = 128/209 (61%), Positives = 159/209 (76%), Gaps = 10/209 (4%)
 Frame = +3

Query: 159 MPKVYPNVVIPP-PQAQKPASKG----QVQVLTVWRKSLLFNCKGFTVFDAKGNLVFRVD 323
           M KVYPN+     P  +K  S         VLTVW+KSLLFNC GFTV+D  GNLVFRVD
Sbjct: 1   MTKVYPNIAAASTPVVEKLKSSSLDTADAIVLTVWKKSLLFNCNGFTVYDGSGNLVFRVD 60

Query: 324 NYLASNKA--EILLMDATGNPLLTIRRKKLTLADNWVVFDGETNVNPLYTVKKHVNFLNS 497
           NY+A + A  EI+LMDA G PLLTIRRK+L+L DNW+V+DGET VNPL++V+KHV  LN+
Sbjct: 61  NYMAGSGANGEIVLMDADGKPLLTIRRKRLSLGDNWLVYDGETAVNPLFSVRKHVKILNT 120

Query: 498 RLLAQVTSRGNNGS---NKNVLYQIEGSYVQRCCMVYDEKRNVVAEIKRKEPVGGVSFGV 668
           + LA V+   ++GS   +KN++Y+IEGSY QR C VYD+K   VAEIK+KE VGGV+FGV
Sbjct: 121 KSLAHVSGNSSSGSTSNSKNIVYEIEGSYSQRSCAVYDDKHRRVAEIKQKEAVGGVAFGV 180

Query: 669 DVFRLVVQQKMDPTVAMALVILLEQMFGS 755
           DVFRL++  KMD +VAMA+VILL+QMFGS
Sbjct: 181 DVFRLIIGPKMDTSVAMAIVILLDQMFGS 209


>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  247 bits (630), Expect = 3e-63
 Identities = 128/209 (61%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
 Frame = +3

Query: 159 MPKVYPNVVIPPPQAQ------KPASKG----QVQVLTVWRKSLLFNCKGFTVFDAKGNL 308
           M KVYPNV       +      KPA+         VLTVW+KSLLFNC GFTV+D +GNL
Sbjct: 1   MTKVYPNVAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGNL 60

Query: 309 VFRVDNYLAS--NKAEILLMDATGNPLLTIRRKKLTLADNWVVFDGETNVNPLYTVKKHV 482
           VFRVDNY+A+  N  EI+LMDA G PLLTIRRK+L+L DNW+V++GET  NP + VKKHV
Sbjct: 61  VFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKHV 120

Query: 483 NFLNSRLLAQVTSRGNNGSNKNVLYQIEGSYVQRCCMVYDEKRNVVAEIKRKEPVGGVSF 662
           N LN++ LA V+    +GSNKNV+Y+IEGSY QRCC VYDEK+  VAEIK+KE VGGV+F
Sbjct: 121 NILNTKCLAHVSPA--SGSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAF 178

Query: 663 GVDVFRLVVQQKMDPTVAMALVILLEQMF 749
           GVDVFRL+V  +M  ++AMA+VILL+QMF
Sbjct: 179 GVDVFRLIVGPEMGTSMAMAMVILLDQMF 207


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  244 bits (622), Expect = 3e-62
 Identities = 124/214 (57%), Positives = 159/214 (74%), Gaps = 15/214 (7%)
 Frame = +3

Query: 159 MPKVYPNV-------------VIPPPQAQKPASKGQVQVLTVWRKSLLFNCKGFTVFDAK 299
           M KVYPNV             ++    +          VLTVW+KSLLFNC GFTVFD+K
Sbjct: 1   MTKVYPNVAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDSK 60

Query: 300 GNLVFRVDNYLASN--KAEILLMDATGNPLLTIRRKKLTLADNWVVFDGETNVNPLYTVK 473
           GNL+FRVDNY+A++    EI+LMDA G PLLT+RRK+L+L D+W+V+DGET +NP ++VK
Sbjct: 61  GNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSVK 120

Query: 474 KHVNFLNSRLLAQVTSRGNNGSNKNVLYQIEGSYVQRCCMVYDEKRNVVAEIKRKEPVGG 653
           KHV+ LN + LA V+     GSNKNV+Y+IEGSY QRCC VYDEK+  VAEIK+KE VGG
Sbjct: 121 KHVSILNKKCLAHVSQAA--GSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGG 178

Query: 654 VSFGVDVFRLVVQQKMDPTVAMALVILLEQMFGS 755
           V+FGVDVFRL+V  ++D ++AMA+VI+L+QMFGS
Sbjct: 179 VAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


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