BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001380
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299041.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ...    60   1e-07
ref|XP_002523172.1| pentatricopeptide repeat-containing protein,...    55   5e-06

>ref|XP_002299041.1| predicted protein [Populus trichocarpa] gi|222846299|gb|EEE83846.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +1

Query: 100 LAQFLMLLKHSSHNVKHLAQILAQXXXXXXXXXXXXWNYVLRSYSKS-SIPIKAIHIYNY 276
           L + L+ LK  + N+K L QIL              WN ++R+YS+S + PIKAI +YN+
Sbjct: 6   LQKILLSLKTKALNIKFLDQILTHTITTGFTYSTPTWNCLIRAYSRSPTAPIKAILVYNF 65

Query: 277 YTKTSSTTPNNHTYPSQLKARSLIHSLTEAKEIHAHLIKT 396
           + KT ST P+N+TYP  LKA S + + +  K++H H+IKT
Sbjct: 66  FIKTCSTRPDNYTYPCLLKACSRLFTDSNGKQVHTHVIKT 105


>ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 553

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/100 (37%), Positives = 58/100 (58%)
 Frame = +1

Query: 97  RLAQFLMLLKHSSHNVKHLAQILAQXXXXXXXXXXXXWNYVLRSYSKSSIPIKAIHIYNY 276
           +L + L+ L  S  ++K   Q+L Q            WN ++R++S+S  PI AI IYN+
Sbjct: 4   QLQKILVCLTASPPDIKVFDQVLTQTITTAFIHATPTWNCLIRAFSRSPTPITAILIYNH 63

Query: 277 YTKTSSTTPNNHTYPSQLKARSLIHSLTEAKEIHAHLIKT 396
           + K     P+ +TYP+ LKA   + SL++ KE+HAH+ KT
Sbjct: 64  FIKGRFVFPDKYTYPAMLKACWRMGSLSKGKEVHAHVTKT 103


>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
           gi|355515394|gb|AES97017.1| hypothetical protein
           MTR_5g044260 [Medicago truncatula]
          Length = 565

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +1

Query: 121 LKHSSHNVKHLAQILAQXXXXXXXXXXXXWNYVLRSYSKSSI-PIKAIHIYNYYT--KTS 291
           L + S+++ H+ QI AQ            WN +++SYSKS++   KAI +Y      + +
Sbjct: 20  LLNQSNSISHVKQIHAQILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQEN 79

Query: 292 STTPNNHTYPSQLKARSLIHSLTEAKEIHAHLIK 393
              P+ HTYP  LKA + + SL E K++HAH++K
Sbjct: 80  ELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLK 113


>ref|XP_002523172.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537579|gb|EEF39203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = +1

Query: 208 WNYVLRSYSKSSIPIKAIHIYNYYTKTSSTTPNNHTYPSQLKARSLIHSLTEAKEIHAHL 387
           WN ++R+YSK+  PIK+I + NY+ +  S  P+ +TYP  L A S +   +  + +H HL
Sbjct: 51  WNCLIRAYSKTHTPIKSILVSNYFIELGSFYPDRYTYPLLLNACSRLSFASMGQLVHTHL 110

Query: 388 IK 393
           IK
Sbjct: 111 IK 112