BLASTX nr result
ID: Cimicifuga21_contig00001338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001338
(1997 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2... 200 1e-48
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 184 6e-44
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 183 1e-43
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 178 4e-42
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 167 1e-38
>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
predicted protein [Populus trichocarpa]
Length = 477
Score = 200 bits (508), Expect = 1e-48
Identities = 138/451 (30%), Positives = 218/451 (48%), Gaps = 11/451 (2%)
Frame = +3
Query: 345 DLDVFVRDGGKETSEALLKLPLDIFLDIISRLPIKPLAVCRCVCKAWGSIIHHPRLTKMH 524
D+D + GG + ++ LP+ +DI+SRLP K + C CVCK W +I P K+H
Sbjct: 17 DIDAQTKGGGDDF-RSISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLH 75
Query: 525 HIKAIQPINKPSLLFHVSVSLLYELKDIDSDSKQVFSEIFLLEHENEDRI--DKGVLVNP 698
H +A P+ L L+ ++ + LL+ E D D V ++P
Sbjct: 76 HTRA------PASLI---------LRSHRHGRRRRPRSLCLLDLEASDICSPDAAVKLSP 120
Query: 699 QFMPSKPDLNASEFMPSKPELKASDLKFEVVGSCNGLVCLAEPFYYDPVYVCNPVIGEYM 878
F P N FE+V +CNGL+C+ + + + NP++G+Y+
Sbjct: 121 DF--GFPTGN-----------------FEIVNTCNGLICIRHFHSPNDISILNPLVGDYI 161
Query: 879 TLPATPKKMGFEIVSGIGFDEVANAYKVVRTIFHFADLSSSPKMEVEVYTLGSNKWRKL- 1055
TLP T KK + S G + YKV++ + K+E E++TLG W +
Sbjct: 162 TLPLTKKKHKSYVFSWFGHSPKTDEYKVIQFV------QQPSKLEAEIHTLGKGTWTSIH 215
Query: 1056 -GNFPYPRCRRSSQVFVKGALHWMTEEYGAHWMAEEHGASEFIIAFDVGKEEFQAVPPPP 1232
G P R FV G L HW+ + SEFI + G+E FQ V PP
Sbjct: 216 GGALSPPIDMRCHNAFVGGCL---------HWIVNDPSKSEFIYCLEFGRELFQPVAAPP 266
Query: 1233 DFIPTTSDCESCKLNLGDLGEHLCLFSYLFDDRCEVWVMKEYGIKASWTKEYVI---SRK 1403
P D + + LG LG L F Y D ++WVMK+YG++ SWTKE+++ S
Sbjct: 267 HLGPNDKD-RTGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTD 325
Query: 1404 VLGLTEVQFKPVKLMTNGNILLVIDSQSLVCYDPTKKRVRKLKIRLPPRFDAITHVGSFI 1583
++ ++ ++P+ L++NG IL+ S+++V Y+P + R LKI F+A +V SF+
Sbjct: 326 IIWYWDL-YRPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKIYGIQNFEANPYVPSFL 384
Query: 1584 SLKDFV----VPTDSKPCINTGEWYGVMKSI 1664
S ++ V ++S CI+T E G++K +
Sbjct: 385 SPREIVKGENTDSNSFLCISTMERQGILKQL 415
>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| f-box family protein [Populus
trichocarpa]
Length = 422
Score = 184 bits (468), Expect = 6e-44
Identities = 128/420 (30%), Positives = 197/420 (46%), Gaps = 28/420 (6%)
Frame = +3
Query: 402 LPLDIFLDIISRLPIKPLAVCRCVCKAWGSIIHHPRLTKMHHIKAIQPINKPSLLFHVSV 581
LP +I DI+SRLPI L +CVC+AW +++ P+L ++ + Q + P L+ H
Sbjct: 28 LPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDF 87
Query: 582 SLLYELKDIDSDSKQVFSEIFLLEHENEDRIDKGVLVNPQFMPSKPDLNASEFMPSKPEL 761
+ L +D F E ++++ + +P+ S MP
Sbjct: 88 PIRNNLYFVD----------FAAHEEEKEKVKR--------IPAP----FSSMMP----- 120
Query: 762 KASDLKFEVVGSCNGLVCLAEPFYYDPVYVCNPVIGEYMTLPATPKKMGFEIVSGIGFDE 941
+FEVVGSCNGL+CL++ Y D +Y+ NP G Y LP + + E+VSG GF+
Sbjct: 121 -----EFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNP 175
Query: 942 VANAYKVVRTIFHFADLSSSPK--------MEVEVYTLGSNKWRKLGNFPYPRCRRSSQV 1097
YKV+R +++ P+ EV++ TLG +WR LG Y RR+S
Sbjct: 176 KTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASGA 235
Query: 1098 FVKGALHWMTEEYGAHWMAEEHGASEFIIAFDVGKEEFQAVPPPPDFIPTTSDC---ESC 1268
V G LHW++ + + +++FD+ E+F+ V P DC C
Sbjct: 236 LVNGRLHWISRPC-------RNKPARRLVSFDLTDEQFREVSKP--------DCGGLNRC 280
Query: 1269 KLNLGDLGEHLCLFSYLFDDRCEVWVMKEYGIKASWTKEYVISRKV-LGLTEVQFKPVKL 1445
+L L L Y R E+WVMKEY +K SW KEY I + GL + Q + +K+
Sbjct: 281 NYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKI 340
Query: 1446 ---------------MTNGNILLVIDSQSLVCYDPTKKRVRKLKIRLPPR-FDAITHVGS 1577
+ NG ILL ++ LV YDP + + ++++ P F + HVGS
Sbjct: 341 WKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGS 400
>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| f-box family protein [Populus
trichocarpa]
Length = 408
Score = 183 bits (465), Expect = 1e-43
Identities = 126/420 (30%), Positives = 198/420 (47%), Gaps = 28/420 (6%)
Frame = +3
Query: 402 LPLDIFLDIISRLPIKPLAVCRCVCKAWGSIIHHPRLTKMHHIKAIQPINKPSLLFHVSV 581
LP +I DI+SRLPI L +CVC+AW ++ P + ++ + Q + P ++ H
Sbjct: 28 LPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETD-PCVILHCDF 86
Query: 582 SLLYELKDIDSDSKQVFSEIFLLEHENEDRIDKGVLVNPQFMPSKPDLNASEFMPSKPEL 761
+ L +D F E ++++ + + F S MP
Sbjct: 87 PIRNNLYFVD----------FAAHEEEKEKVKR---IRAPF---------SSMMP----- 119
Query: 762 KASDLKFEVVGSCNGLVCLAEPFYYDPVYVCNPVIGEYMTLPATPKKMGFEIVSGIGFDE 941
+FEVVGSCNGL+CL++ + D +Y+ NP G Y LP + + E+V G GF+
Sbjct: 120 -----EFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNP 174
Query: 942 VANAYKVVRTIFHFADLSSSPK--------MEVEVYTLGSNKWRKLGNFPYPRCRRSSQV 1097
N YKV+R +++ P+ +V++ TLG WR LG Y RR+S+
Sbjct: 175 KTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASET 234
Query: 1098 FVKGALHWMTEEYGAHWMAEEHGASEFIIAFDVGKEEFQAVPPPPDFIPTTSDC---ESC 1268
V G LHW++ + + +++FD+ E+F+ VP P DC C
Sbjct: 235 LVNGRLHWVSRPC-------RNKPARRLVSFDLTDEQFREVPKP--------DCGGLNRC 279
Query: 1269 KLNLGDLGEHLCLFSYLFDDRCEVWVMKEYGIKASWTKEYVISRKV-LGLTEVQFKPVKL 1445
+L L L + Y R E+WVMKEY +K SW KEY I + GL + +P+K+
Sbjct: 280 DYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKI 339
Query: 1446 ---------------MTNGNILLVIDSQSLVCYDPTKKRVRKLKIRLPPR-FDAITHVGS 1577
+ NG ILL +++LV YDP K + + + ++ P+ F + HVGS
Sbjct: 340 WKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGS 399
>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
gi|147785390|emb|CAN68678.1| hypothetical protein
VITISV_041941 [Vitis vinifera]
Length = 409
Score = 178 bits (452), Expect = 4e-42
Identities = 131/422 (31%), Positives = 192/422 (45%), Gaps = 29/422 (6%)
Frame = +3
Query: 399 KLPLDIFLDIISRLPIKPLAVCRCVCKAWGSIIHHPRLTKMHHIKAIQPINKPSLLFHVS 578
+LP DI LDI+SRLP+ L R VC+ W + L H + Q P L+ H
Sbjct: 29 RLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQ--YNPCLILHCD 86
Query: 579 VSLLYELKDIDSDSKQVFSEIFLLEHENEDRIDKGVLVNPQFMPSKPDLNASEFMPSKPE 758
+ ++ +D + E ++D + K + F S PE
Sbjct: 87 YPIRNQISFVDISA----------ESRDKDMVRKLTI---------------PFWASMPE 121
Query: 759 LKASDLKFEVVGSCNGLVCLAEPFYYDPVYVCNPVIGEYMTLPATPKKMGFEIVSGIGFD 938
FEVVGSCNGL+CLA+ + D VYV NP ++ LP + + E+V G G+
Sbjct: 122 -------FEVVGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYH 174
Query: 939 EVANAYKVVRTIFH---------FADLSSSPKMEVEVYTLGSNKWRKLGNFPYPRCRRSS 1091
+ YKVV+ +++ F ++ S + EV+V TLGS WR LG Y R S
Sbjct: 175 PMTEVYKVVKVVYYRNGYGGFSRFRRITCS-QSEVQVLTLGSPTWRSLGKVSYQLDRWPS 233
Query: 1092 QVFVKGALHWMTEEYGAHWMAEEHGASEFIIAFDVGKEEFQAVPPPPDFIPTTSDC---E 1262
+ V G LHW+T + FI++FD+ E+F+ +P P DC
Sbjct: 234 EALVNGRLHWVTR--------PRRYVTRFIVSFDLADEQFREIPKP--------DCGGLS 277
Query: 1263 SCKLNLGDLGEHLCLFSYLFDDRCEVWVMKEYGIKASWTKEYVISRKV-LGLTEVQFKPV 1439
C +L LG L + + + EVWVMKEY +K SW KE+ I + GL + +P
Sbjct: 278 RCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPH 337
Query: 1440 K---------------LMTNGNILLVIDSQSLVCYDPTKKRVRKLKIR-LPPRFDAITHV 1571
+ L+ NG ILL + LV Y+P + + + L ++ LP F HV
Sbjct: 338 RIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHV 397
Query: 1572 GS 1577
GS
Sbjct: 398 GS 399
>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
predicted protein [Populus trichocarpa]
Length = 410
Score = 167 bits (422), Expect = 1e-38
Identities = 121/427 (28%), Positives = 201/427 (47%), Gaps = 18/427 (4%)
Frame = +3
Query: 363 RDGGKETSEA---LLKLPLDIFLDIISRLPIKPLAVCRCVCKAWGSIIHHPRLTKMHHIK 533
++GG + +A + LP DI DI+ +LP+K CRCVC+ W +++ +++ +
Sbjct: 12 KNGGNQVQDAEWSMSALPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRER 71
Query: 534 AIQPI---NKPSLLFHVSVSLL-YELKDIDSDSKQVFSEIFLLEHENEDRIDKGVLVNPQ 701
A + + PS + + +L + +D +S V + + L +N
Sbjct: 72 AQSMLVLRSPPSCVSRKAAALAPNDFYVVDLESGSVRNNVMKLNTKNN------------ 119
Query: 702 FMPSKPDLNASEFMPSKPELKASDLKFEVVGSCNGLVCLAEPFYYDPVYVCNPVIGEYMT 881
+P+ E+VGSCNGL+CL + Y+CNPV GE++
Sbjct: 120 -------------LPT--------CHVELVGSCNGLLCLFDKNSKKVFYLCNPVTGEHVR 158
Query: 882 LPATPKKMG------FEIVSGIGFDEVANAYKVVR-TIFHFADLSSSPKMEVEVYTLGSN 1040
PA KK + V G GF +N Y V+R T S + E E+ G N
Sbjct: 159 TPANCKKEKQRGKTILDAVLGFGFSPKSNHYMVLRITRKKLTYPISILRSEGEICIFGDN 218
Query: 1041 KWRKLGNFPYPRCRRSSQVFVKGALHWMTEEYGAHWMAEEHGASEFIIAFDVGKEEFQAV 1220
+W+ +G P+P C++ V + GALHW+ +++ ++ I A D+ ++ + +
Sbjct: 219 EWKSIGEIPFPDCKKFFGVSLNGALHWILN-------LDDYEDADLICALDIDSKKIRPM 271
Query: 1221 PPPPDFIPTTSDCESCKLNLGDLGEHLCLFSYLFDDRCEVWVMKEYGIKASWTKEYVISR 1400
PP F T++ + LG L + L + + ++WVMKEYG+K SWTKE VI++
Sbjct: 272 SPPNGFRRDTTE-----MTLGVLRDCLFICDSMTLYNLDIWVMKEYGVKDSWTKEIVIAK 326
Query: 1401 KVL--GLTEVQFKPVKLMTNGNILLVIDSQSLVCYDPTKKRVRKLKI--RLPPRFDAITH 1568
L L +P+ + +G +L+ DS V YDP K K+ + R+ F+A+
Sbjct: 327 TSLPSNLQNSFLQPIMVSKDGEVLISSDSNVFVWYDPGSKSFTKVTLPSRVGYEFEAVCS 386
Query: 1569 VGSFISL 1589
V SF SL
Sbjct: 387 VASFDSL 393