BLASTX nr result

ID: Cimicifuga21_contig00001335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001335
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]...   320   4e-85
ref|XP_002468614.1| hypothetical protein SORBIDRAFT_01g049010 [S...   319   6e-85
ref|NP_001149113.1| ubiquitin-conjugating enzyme E2 I [Zea mays]...   319   7e-85
dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]    318   9e-85
gb|ACG45477.1| ubiquitin-conjugating enzyme E2 I [Zea mays]           318   1e-84

>ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|195605910|gb|ACG24785.1| ubiquitin-conjugating enzyme
           E2 I [Zea mays] gi|195636744|gb|ACG37840.1|
           ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|414864465|tpg|DAA43022.1| TPA: putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 160

 Score =  320 bits (819), Expect = 4e-85
 Identities = 142/158 (89%), Positives = 154/158 (97%)
 Frame = -3

Query: 763 GGIARGRLAEERKAWRKNHPHGFVAKPETAPDGSVNLMVWQCTIPGKTGTDWEGGHFPLT 584
           GGIARGRLAEERKAWRKNHPHGFVAKPE+ PDG+VNLM+WQCTIPGK GTDWEGG+FPLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWQCTIPGKQGTDWEGGYFPLT 62

Query: 583 MHFGEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 404
           +HF EDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 403 QPNAADPAQTDGYHLFIQEPTEYRKRVKLQAKQYPSIV 290
           QPN ADPAQTDGYHLFIQ+PTEY++RV+LQAKQYP++V
Sbjct: 123 QPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPALV 160


>ref|XP_002468614.1| hypothetical protein SORBIDRAFT_01g049010 [Sorghum bicolor]
           gi|241922468|gb|EER95612.1| hypothetical protein
           SORBIDRAFT_01g049010 [Sorghum bicolor]
          Length = 160

 Score =  319 bits (818), Expect = 6e-85
 Identities = 142/158 (89%), Positives = 153/158 (96%)
 Frame = -3

Query: 763 GGIARGRLAEERKAWRKNHPHGFVAKPETAPDGSVNLMVWQCTIPGKTGTDWEGGHFPLT 584
           GGIARGRLAEERKAWRKNHPHGFVAKPET PDG+VNLM+W CTIPGK GTDWEGG+FPLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPETLPDGTVNLMIWHCTIPGKQGTDWEGGYFPLT 62

Query: 583 MHFGEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 404
           +HF EDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 403 QPNAADPAQTDGYHLFIQEPTEYRKRVKLQAKQYPSIV 290
           QPN ADPAQTDGYHLFIQ+PTEY++RV+LQAKQYP++V
Sbjct: 123 QPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPALV 160


>ref|NP_001149113.1| ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|195624824|gb|ACG34242.1| ubiquitin-conjugating enzyme
           E2 I [Zea mays] gi|413957114|gb|AFW89763.1| putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 160

 Score =  319 bits (817), Expect = 7e-85
 Identities = 142/158 (89%), Positives = 153/158 (96%)
 Frame = -3

Query: 763 GGIARGRLAEERKAWRKNHPHGFVAKPETAPDGSVNLMVWQCTIPGKTGTDWEGGHFPLT 584
           GGIARGRLAEERKAWRKNHPHGFVAKPE+ PDG+VNLM+W CTIPGK GTDWEGG+FPLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWHCTIPGKQGTDWEGGYFPLT 62

Query: 583 MHFGEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 404
           +HF EDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 403 QPNAADPAQTDGYHLFIQEPTEYRKRVKLQAKQYPSIV 290
           QPN ADPAQTDGYHLFIQ+PTEY++RVKLQAKQYP++V
Sbjct: 123 QPNPADPAQTDGYHLFIQDPTEYKRRVKLQAKQYPALV 160


>dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 161

 Score =  318 bits (816), Expect = 9e-85
 Identities = 142/161 (88%), Positives = 153/161 (95%)
 Frame = -3

Query: 772 MSGGGIARGRLAEERKAWRKNHPHGFVAKPETAPDGSVNLMVWQCTIPGKTGTDWEGGHF 593
           MSGGGIARGRLAEERKAWRKNHPHGFVAKPET  DGSVNLM+W CTIPGK GTDWE G++
Sbjct: 1   MSGGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSVNLMIWNCTIPGKQGTDWESGYY 60

Query: 592 PLTMHFGEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 413
           PLT+HF EDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 61  PLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 120

Query: 412 LLDQPNAADPAQTDGYHLFIQEPTEYRKRVKLQAKQYPSIV 290
           LLDQPN ADPAQTDGYHLFIQ+P EYR+R++LQAKQYP++V
Sbjct: 121 LLDQPNPADPAQTDGYHLFIQDPAEYRRRIRLQAKQYPALV 161


>gb|ACG45477.1| ubiquitin-conjugating enzyme E2 I [Zea mays]
          Length = 160

 Score =  318 bits (815), Expect = 1e-84
 Identities = 141/158 (89%), Positives = 153/158 (96%)
 Frame = -3

Query: 763 GGIARGRLAEERKAWRKNHPHGFVAKPETAPDGSVNLMVWQCTIPGKTGTDWEGGHFPLT 584
           GGIARGRLAEERKAWRKNHPHGFVAKPE+ PDG+VNLM+WQCTIPGK GTDWEGG+FPLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWQCTIPGKQGTDWEGGYFPLT 62

Query: 583 MHFGEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 404
           +HF EDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 403 QPNAADPAQTDGYHLFIQEPTEYRKRVKLQAKQYPSIV 290
           QPN  DPAQTDGYHLFIQ+PTEY++RV+LQAKQYP++V
Sbjct: 123 QPNPVDPAQTDGYHLFIQDPTEYKRRVRLQAKQYPALV 160


Top