BLASTX nr result

ID: Cimicifuga21_contig00001328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001328
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]    85   8e-15
ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_003603714.1| hypothetical protein MTR_3g111460 [Medicago ...    64   2e-08
ref|XP_002510318.1| conserved hypothetical protein [Ricinus comm...    63   4e-08
ref|XP_002307238.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08

>emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]
          Length = 99

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +3

Query: 21  MAFSLSSKPKTNEKNTKIDNYDVDQGEEPINTVTSHLYL--THTTEPLDKDVVLRRIRHR 194
           M+F +S    ++  + KI N D  +  + + TVTS+L+L    +++ LDKD+VLRRIRHR
Sbjct: 1   MSFLVSKPQPSSSDSEKITNSDDREDSDTLXTVTSYLHLKPAZSSQTLDKDLVLRRIRHR 60

Query: 195 KRVNKVRSALQSVLSSPFLRKTGDGATLPQPMWLEDAFSAP 317
           KRVNKVR+  Q+++SSPF   T D   + +  W++DAF+AP
Sbjct: 61  KRVNKVRNLFQTLVSSPF--STTDSFRVQEKKWVDDAFAAP 99


>ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|222842937|gb|EEE80484.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +3

Query: 30  SLSSKPKTNEKNTKIDNYDVDQGEEPINTVTSHLYL--THTTEPLDKDVVLRRIRHRKRV 203
           S SS  K  + N   + +  DQ E  IN+VTS +YL   H+TE  DK+ VL+RIR RKRV
Sbjct: 8   SQSSLSKPEDINNSTNTHTKDQ-EILINSVTSFIYLKPVHSTETRDKEEVLQRIRQRKRV 66

Query: 204 NKVRSALQSVLSSPFLRKTGDGATLPQPMWLEDAFSAP 317
           NKVR  LQ  L   F  K+ +  ++    W++DAF+AP
Sbjct: 67  NKVRDRLQGFLGWLFSSKSENEVSV---KWVDDAFAAP 101


>ref|XP_003603714.1| hypothetical protein MTR_3g111460 [Medicago truncatula]
           gi|355492762|gb|AES73965.1| hypothetical protein
           MTR_3g111460 [Medicago truncatula]
          Length = 111

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
 Frame = +3

Query: 54  NEKNTKIDN---YDVDQGEEPINTVTSHLYLT--HTTEPLDKDVVLRRIRHRKRVNKVRS 218
           N+K  ++      + ++ EE +  VTS L+L      + LDK+VVLRRIRHRKR+NKV++
Sbjct: 18  NDKQVEVGGNRGVEEEEEEESVFNVTSQLFLKPIENCKNLDKEVVLRRIRHRKRMNKVQA 77

Query: 219 ALQSVLSSPFLRKTGDG-ATLPQPMWLEDAFSA 314
           A+ ++        TG+G A++    W++DAF+A
Sbjct: 78  AVGAIFLGSSANNTGNGDASVQHKRWVDDAFAA 110


>ref|XP_002510318.1| conserved hypothetical protein [Ricinus communis]
           gi|223551019|gb|EEF52505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
 Frame = +3

Query: 21  MAFSLS-SKPKTNE-KNTKIDNYDVDQGEEPI---NTVTSHLYL--THTTEPLDKDVVLR 179
           M+F +S ++P  +E +N   +N   DQ ++ +     VT+H++L   H+++ LDKDVVLR
Sbjct: 1   MSFLVSKTQPALSEAENNAANNSTEDQEDQEMLCGARVTTHVHLKPAHSSQTLDKDVVLR 60

Query: 180 RIRHRKRVNKVRSALQSVLSSPFLRKTGDGATLPQPMWLEDAFSAP 317
           RIR RK  NKVRS LQ  L  P    T          W++DAF+AP
Sbjct: 61  RIRQRKCANKVRSVLQGFLGFP----TSSKPDKVSVRWVDDAFAAP 102


>ref|XP_002307238.1| predicted protein [Populus trichocarpa] gi|222856687|gb|EEE94234.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 35/103 (33%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
 Frame = +3

Query: 21  MAFSLSSKPKTNEKNTKID--NYDVDQGEEPINTVTSHLYLTHTTEPLDKDVVLRRIRHR 194
           M+F +S  P++  +N K++  + +V+  +   N +++ L+L      ++KDV+L+RIRH 
Sbjct: 16  MSFVVSKAPQSFSENEKLNLKHREVEDNQALTNPISNQLHLKPAVHAMEKDVILKRIRHH 75

Query: 195 KRVNKVRSALQSVLSSPFLRKTGDGATLPQPMWLE--DAFSAP 317
           K VNKV+ A Q++ +S   ++  + A+  Q  WL+  DAFS+P
Sbjct: 76  KSVNKVKKAFQALAASSLDQE--NMASAYQQKWLDPHDAFSSP 116


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