BLASTX nr result

ID: Cimicifuga21_contig00001321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001321
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221...   138   4e-30
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_002327893.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-29
gb|ABK93770.1| unknown [Populus trichocarpa]                          135   4e-29
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   133   1e-28

>ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221260 [Cucumis sativus]
           gi|449515057|ref|XP_004164566.1| PREDICTED:
           uncharacterized LOC101221260 [Cucumis sativus]
          Length = 298

 Score =  138 bits (347), Expect = 4e-30
 Identities = 72/108 (66%), Positives = 79/108 (73%)
 Frame = -3

Query: 789 WQSFLRVMHGVVTVFGRIAMLVEQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGI 610
           W SFLRVMHGVV  FGRI++L++QNTQAFHMFM+ALLQLFDRSGMLYGELARFVLRLLGI
Sbjct: 191 WMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGI 250

Query: 609 RTKPRKVXXXXXXXXXXXXXXXXXXXXHIEGPKAASAPSGSWDNVWGN 466
           +TKPRKV                     IEGPK   AP G+WDNVW N
Sbjct: 251 KTKPRKV-LGPDGLPIPGAPHPHQSQNLIEGPK--PAPDGAWDNVWPN 295



 Score =  120 bits (300), Expect = 1e-24
 Identities = 61/91 (67%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -3

Query: 1359 PRHPSMSNTTGNGPPPKPWERAPASSGPAPFKPPTPGSTSDVVEASGTAKPGEIVTSSPS 1180
            P  PS SN     PPPKPWERA  SSG APF+PP+ G+TSDVVEASGTAKPGEIV+SS  
Sbjct: 5    PPQPSASN-----PPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDR 59

Query: 1179 NPPVIGNTLTRPVPTRPWEQNYG-STYGANA 1090
               V  N+L RPVPTRPWEQNYG ++YG  A
Sbjct: 60   TAAVNRNSLGRPVPTRPWEQNYGNNSYGGGA 90


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  135 bits (341), Expect = 2e-29
 Identities = 71/108 (65%), Positives = 81/108 (75%)
 Frame = -3

Query: 789 WQSFLRVMHGVVTVFGRIAMLVEQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGI 610
           W SFL+VM GVV VFGRI+ L++QNTQAFHMFMSALLQLFDRSG+LYGELARF LRLLGI
Sbjct: 30  WVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLFDRSGLLYGELARFALRLLGI 89

Query: 609 RTKPRKVXXXXXXXXXXXXXXXXXXXXHIEGPKAASAPSGSWDNVWGN 466
           ++KPRKV                    +IEGPKA  APSG+WDNVWG+
Sbjct: 90  KSKPRKV-QGPGPDGFPVPHNPRGNQNYIEGPKA--APSGAWDNVWGD 134


>ref|XP_002327893.1| predicted protein [Populus trichocarpa] gi|222837302|gb|EEE75681.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  135 bits (339), Expect = 4e-29
 Identities = 72/109 (66%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = -3

Query: 789 WQSFLRVMHGVVTVFGRIAMLVEQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGI 610
           W SFLRV+ GVV  FGR+++L++QNTQAFHMFM+ALLQLFDRSGMLYGELARFVLRLLGI
Sbjct: 176 WISFLRVLQGVVNFFGRLSILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGI 235

Query: 609 RTKPRKV-XXXXXXXXXXXXXXXXXXXXHIEGPKAASAPSGSWDNVWGN 466
           RTKPR V                     +IEGPKA  APSGSWDNVW N
Sbjct: 236 RTKPRMVNPQGPNGLPLPGPEGTNANSRYIEGPKA--APSGSWDNVWEN 282



 Score =  101 bits (252), Expect = 4e-19
 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = -3

Query: 1332 TGNGPPPKPWERAPASSGPAPFKPPTPGSTSDVVEASGTAKPGEIVTSSPSNPPVIGNTL 1153
            + N PPPKPWE++  SSG  PFKPP+ GSTSDVVEASGTA+PGEIV SS  N     N +
Sbjct: 8    SANNPPPKPWEQSGGSSGATPFKPPSAGSTSDVVEASGTARPGEIVQSS-GNTTNNTNAV 66

Query: 1152 TRPVPTRPWEQNYG-STYG 1099
             RP+P RPWEQ+Y  S YG
Sbjct: 67   GRPLPARPWEQSYSTSNYG 85


>gb|ABK93770.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  135 bits (339), Expect = 4e-29
 Identities = 72/109 (66%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = -3

Query: 789 WQSFLRVMHGVVTVFGRIAMLVEQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGI 610
           W SFLRV+ GVV  FGR+++L++QNTQAFHMFM+ALLQLFDRSGMLYGELARFVLRLLGI
Sbjct: 194 WISFLRVLQGVVNFFGRLSILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGI 253

Query: 609 RTKPRKV-XXXXXXXXXXXXXXXXXXXXHIEGPKAASAPSGSWDNVWGN 466
           RTKPR V                     +IEGPKA  APSGSWDNVW N
Sbjct: 254 RTKPRMVNPQGPNGLPLPGPEGTNANSRYIEGPKA--APSGSWDNVWEN 300



 Score =  100 bits (249), Expect = 1e-18
 Identities = 49/79 (62%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = -3

Query: 1332 TGNGPPPKPWERAPASSGPAPFKPPTPGSTSDVVEASGTAKPGEIVTSSPSNPPVIGNTL 1153
            + N PPPKPWE++  SSG  PFKPP+ GSTSDVVEASGTA+PGEIV SS  N     N +
Sbjct: 8    SANNPPPKPWEQSGGSSGATPFKPPSAGSTSDVVEASGTARPGEIVQSS-GNTTNNTNAV 66

Query: 1152 TRPVPTRPWEQNYG-STYG 1099
             RP+P RPWEQ+Y  + YG
Sbjct: 67   GRPLPARPWEQSYSTNNYG 85


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  133 bits (335), Expect = 1e-28
 Identities = 69/108 (63%), Positives = 80/108 (74%)
 Frame = -3

Query: 789 WQSFLRVMHGVVTVFGRIAMLVEQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGI 610
           W SFLRVM GVV  FGRI++L++QNTQAFHMFM+A+LQLFDR+G+LYGELARFVLRLLGI
Sbjct: 205 WISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLFDRTGLLYGELARFVLRLLGI 264

Query: 609 RTKPRKVXXXXXXXXXXXXXXXXXXXXHIEGPKAASAPSGSWDNVWGN 466
           +TKPRKV                    +IEGPK   APSG WDNVWG+
Sbjct: 265 KTKPRKV-QGPGPDGLPAPHNPHGNQNYIEGPK--GAPSGGWDNVWGD 309



 Score =  111 bits (277), Expect = 5e-22
 Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = -3

Query: 1353 HPSMSNTTGNGPPPKPWERA-PASSGPAPFKPPTPGSTSDVVEASGTAKPGEIVTSSPSN 1177
            H S     G  PP KPWER+  +SSGP PFKPPTPGSTSDVVEASGTA+PGEIV ++   
Sbjct: 15   HVSYYPIVGGSPPAKPWERSGTSSSGPTPFKPPTPGSTSDVVEASGTARPGEIVPAANRT 74

Query: 1176 PPVIG-NTLTRPVPTRPWE-QNYGSTYG 1099
              V   NTL RPVPTRPWE Q YGS+YG
Sbjct: 75   TAVNNTNTLGRPVPTRPWEQQTYGSSYG 102


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