BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001269
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   442   e-122
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   442   e-122
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   442   e-122
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...   441   e-121
dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]                       438   e-120

>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus]
          Length = 1118

 Score =  442 bits (1138), Expect = e-122
 Identities = 215/304 (70%), Positives = 255/304 (83%), Gaps = 3/304 (0%)
 Frame = +1

Query: 184  IRKVVEYCSYDSKKEA---LYTIIKVARNEDLAEQIGREIYFDLVDHDKVRCFRTRKQTS 354
            ++K  E   +  K++A   LYTIIKVAR+EDL EQIG++I+FDLVDHDKVR FR +KQ  
Sbjct: 546  LKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLVEQIGKDIFFDLVDHDKVRSFRIQKQMP 605

Query: 355  FSIFKEEVAKEFGIPVQFQRFWLWGTRQNYTYRPDRPLTPQEETKSVEQLMNLQPKAHHA 534
            F++FKEEVAKEFGIP+QFQR+WLW  RQN+TYRP+RPLTP EE +SV QL  +  K H+A
Sbjct: 606  FNLFKEEVAKEFGIPIQFQRYWLWAKRQNHTYRPNRPLTPMEEAQSVGQLREVSNKVHNA 665

Query: 535  ELKLFLEVELGPDFHLIQPPKKTKEDILIFFKLYDPITEELRYVGRLFVKGSGTPSEILT 714
            ELKL LEVE GPD   I PP KTK+DIL+FFKLY+P  EELRYVGRLFVKG+G P EILT
Sbjct: 666  ELKLLLEVEYGPDSRPIAPPDKTKDDILLFFKLYEPEKEELRYVGRLFVKGNGKPFEILT 725

Query: 715  KLNVMAGFSSSQEIELYEEIKFEPSVMCERIDKKRSFLAGQIEDGDIICFQKSPPVESWE 894
            KLN MAG++  +EIELYEEIKFEP++MCE IDKK +F A Q+EDGDI+CFQKSPPVE+ E
Sbjct: 726  KLNEMAGYAPEEEIELYEEIKFEPNIMCEPIDKKFTFRASQLEDGDIVCFQKSPPVENTE 785

Query: 895  QCRYPDVPSFLEYVHNRQVVHFRAREKPKENDFCLELSKLFDYDDVVKKVAAQLGVHDPS 1074
            Q RYPDVPSFLEYVHNRQVVHFR+ EKPKE+DFCLE+SKL+ YD+VV+++A QLGV DPS
Sbjct: 786  QYRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDEVVERLAQQLGVDDPS 845

Query: 1075 KIRL 1086
            KIRL
Sbjct: 846  KIRL 849



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 43/83 (51%), Positives = 64/83 (77%)
 Frame = +1

Query: 1   VVNQVYSQYTVRKGVQECDYHQFIYDKTYHGFTSFMPFSVLHNPSKGFLVNNTLIVKAEV 180
           V+NQ++++Y+VRK  Q    HQF   ++  GFTSFMP S L++P++G+LVN+TLIV+AEV
Sbjct: 124 VINQIHNKYSVRKDTQ----HQFNARESDWGFTSFMPLSELYDPTRGYLVNDTLIVEAEV 179

Query: 181 SIRKVVEYCSYDSKKEALYTIIK 249
            +R+VV+Y +YDSKKE  +  +K
Sbjct: 180 LVRRVVDYWTYDSKKETGFVGLK 202


>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  442 bits (1138), Expect = e-122
 Identities = 217/290 (74%), Positives = 252/290 (86%), Gaps = 1/290 (0%)
 Frame = +1

Query: 220  KKEA-LYTIIKVARNEDLAEQIGREIYFDLVDHDKVRCFRTRKQTSFSIFKEEVAKEFGI 396
            K EA LYTIIKVARNEDL EQIGR+IYFDLVDHDKVR FR +KQT F++FKEEVAKEFGI
Sbjct: 557  KAEAHLYTIIKVARNEDLIEQIGRDIYFDLVDHDKVRSFRIQKQTPFNLFKEEVAKEFGI 616

Query: 397  PVQFQRFWLWGTRQNYTYRPDRPLTPQEETKSVEQLMNLQPKAHHAELKLFLEVELGPDF 576
            PVQFQRFWLW  RQN+TYRP+RPLT QEE +SV QL  +  KA+HAELKLFLEVELG D 
Sbjct: 617  PVQFQRFWLWAKRQNHTYRPNRPLTLQEEAQSVGQLREVSNKANHAELKLFLEVELGQDL 676

Query: 577  HLIQPPKKTKEDILIFFKLYDPITEELRYVGRLFVKGSGTPSEILTKLNVMAGFSSSQEI 756
              + PP+KTKE+IL+FFKLYDP+ EELRYVGRLFVKGSG P EIL+KLN +AGFS ++EI
Sbjct: 677  RPVPPPEKTKEEILLFFKLYDPLKEELRYVGRLFVKGSGKPIEILSKLNELAGFSPNEEI 736

Query: 757  ELYEEIKFEPSVMCERIDKKRSFLAGQIEDGDIICFQKSPPVESWEQCRYPDVPSFLEYV 936
            EL+EEIKFEP+VMCE IDK+ +F A Q+EDGDIIC+Q+   ++S +QCRYPDVPSFLEYV
Sbjct: 737  ELFEEIKFEPNVMCEHIDKRLTFRASQLEDGDIICYQRLLQIDSSQQCRYPDVPSFLEYV 796

Query: 937  HNRQVVHFRAREKPKENDFCLELSKLFDYDDVVKKVAAQLGVHDPSKIRL 1086
            HNRQVV FR+ EKPKE++FCLELSKLF+YDDVV++VAA LG+ D SKIRL
Sbjct: 797  HNRQVVRFRSLEKPKEDEFCLELSKLFNYDDVVERVAAHLGLDDSSKIRL 846



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   VVNQVYSQYTVRKGVQECDYHQFIYDKTYHGFTSFMPFSVLHNPSKGFLVNNTLIVKAEV 180
           V+NQ+++++T+RK  Q    HQF   ++  GFTSFMP   L++P++G+LVN+T IV+A+V
Sbjct: 121 VINQIHNKFTIRKDTQ----HQFNARESDWGFTSFMPLGELYDPARGYLVNDTCIVEADV 176

Query: 181 SIRKVVEYCSYDSKKEALYTIIK 249
           ++R+V++Y ++DSKKE  Y  +K
Sbjct: 177 AVRRVIDYWTHDSKKETGYVGLK 199


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  442 bits (1138), Expect = e-122
 Identities = 218/285 (76%), Positives = 240/285 (84%)
 Frame = +1

Query: 232  LYTIIKVARNEDLAEQIGREIYFDLVDHDKVRCFRTRKQTSFSIFKEEVAKEFGIPVQFQ 411
            LYTIIKVAR+EDL EQIGR+IYFDLVDHDKVR FR +KQT F+ FKEEVAKEFGIPVQFQ
Sbjct: 562  LYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQKQTPFNFFKEEVAKEFGIPVQFQ 621

Query: 412  RFWLWGTRQNYTYRPDRPLTPQEETKSVEQLMNLQPKAHHAELKLFLEVELGPDFHLIQP 591
            RFW+W  RQN+TYRP+RPLTPQEE +SV QL     KAH AELKLFLEVELG D   I P
Sbjct: 622  RFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREASNKAHSAELKLFLEVELGLDLRPIAP 681

Query: 592  PKKTKEDILIFFKLYDPITEELRYVGRLFVKGSGTPSEILTKLNVMAGFSSSQEIELYEE 771
            P KTKEDIL+FFKLY P   ELRY+GRLFVK SG P EIL KLN MAGF++ +EIELYEE
Sbjct: 682  PDKTKEDILLFFKLYVPEKGELRYIGRLFVKSSGKPIEILAKLNEMAGFATDEEIELYEE 741

Query: 772  IKFEPSVMCERIDKKRSFLAGQIEDGDIICFQKSPPVESWEQCRYPDVPSFLEYVHNRQV 951
            IKFEP VMCE +DK+ SF   QIEDGDIICFQKSPP+E  E C+YPDVPSFLEYVHNRQV
Sbjct: 742  IKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLEVEEDCKYPDVPSFLEYVHNRQV 801

Query: 952  VHFRAREKPKENDFCLELSKLFDYDDVVKKVAAQLGVHDPSKIRL 1086
            VHFR+ EKPKE+DFCLELSKL  YDDVV+KVA Q+G+ DPSKIRL
Sbjct: 802  VHFRSLEKPKEDDFCLELSKLHTYDDVVEKVAQQIGLDDPSKIRL 846



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 45/83 (54%), Positives = 65/83 (78%)
 Frame = +1

Query: 1   VVNQVYSQYTVRKGVQECDYHQFIYDKTYHGFTSFMPFSVLHNPSKGFLVNNTLIVKAEV 180
           VVNQ++++Y++RK  Q    HQF   ++  GFTSFMP S L++PS+G+LVN+T+IV+AEV
Sbjct: 121 VVNQIHNKYSIRKDTQ----HQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEAEV 176

Query: 181 SIRKVVEYCSYDSKKEALYTIIK 249
           ++RKV++Y SYDSKKE  Y  +K
Sbjct: 177 AVRKVLDYWSYDSKKETGYVGLK 199


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1109

 Score =  441 bits (1135), Expect = e-121
 Identities = 219/290 (75%), Positives = 246/290 (84%), Gaps = 1/290 (0%)
 Frame = +1

Query: 220  KKEA-LYTIIKVARNEDLAEQIGREIYFDLVDHDKVRCFRTRKQTSFSIFKEEVAKEFGI 396
            K EA LYTIIKVAR+EDL EQIG++IYFDLVDHDKVR FR +KQ  F++FKEEV KEFGI
Sbjct: 558  KAEAHLYTIIKVARSEDLLEQIGKDIYFDLVDHDKVRSFRIQKQMPFNLFKEEVVKEFGI 617

Query: 397  PVQFQRFWLWGTRQNYTYRPDRPLTPQEETKSVEQLMNLQPKAHHAELKLFLEVELGPDF 576
            PVQFQRFWLW  RQN+TYRP+RPLTPQEE +SV QL  +  KA++AELKLFLEVE G D 
Sbjct: 618  PVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKANNAELKLFLEVEFGQDL 677

Query: 577  HLIQPPKKTKEDILIFFKLYDPITEELRYVGRLFVKGSGTPSEILTKLNVMAGFSSSQEI 756
              I PP+KTKEDIL+FFKLYDP  EELRYVGRLFVKG+G P EILTKLN MAGF+S QEI
Sbjct: 678  RPIPPPEKTKEDILLFFKLYDPSKEELRYVGRLFVKGAGKPLEILTKLNEMAGFASDQEI 737

Query: 757  ELYEEIKFEPSVMCERIDKKRSFLAGQIEDGDIICFQKSPPVESWEQCRYPDVPSFLEYV 936
            ELYEEIKFEP+VMCE IDKK +F A Q+EDGDI+CFQKS      EQCRYPDVPSFLEYV
Sbjct: 738  ELYEEIKFEPNVMCEHIDKKLTFRASQLEDGDIVCFQKSAQDGGGEQCRYPDVPSFLEYV 797

Query: 937  HNRQVVHFRAREKPKENDFCLELSKLFDYDDVVKKVAAQLGVHDPSKIRL 1086
            HNRQVV FR+ EKPKE++FCLELSKL +YDDVV++VA  LG+ DPSKIRL
Sbjct: 798  HNRQVVRFRSLEKPKEDEFCLELSKLHNYDDVVERVATHLGLDDPSKIRL 847



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 39/83 (46%), Positives = 61/83 (73%)
 Frame = +1

Query: 1   VVNQVYSQYTVRKGVQECDYHQFIYDKTYHGFTSFMPFSVLHNPSKGFLVNNTLIVKAEV 180
           VVNQ++ +Y++RK  Q    HQF   ++  GFTSFMP   L++P +G+LVN+T +V+A+V
Sbjct: 122 VVNQIHQKYSIRKDTQ----HQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADV 177

Query: 181 SIRKVVEYCSYDSKKEALYTIIK 249
           ++R+V++Y S+DSKKE  Y  +K
Sbjct: 178 AVRRVIDYWSHDSKKETGYVGLK 200


>dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
          Length = 1118

 Score =  438 bits (1126), Expect = e-120
 Identities = 215/304 (70%), Positives = 252/304 (82%), Gaps = 3/304 (0%)
 Frame = +1

Query: 184  IRKVVEYCSYDSKKEA---LYTIIKVARNEDLAEQIGREIYFDLVDHDKVRCFRTRKQTS 354
            ++K  E   +  K++A   LYTIIKVARNEDL EQIG++IYFDLVDHDKVR FR +KQ S
Sbjct: 546  LKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLKEQIGKDIYFDLVDHDKVRSFRVQKQMS 605

Query: 355  FSIFKEEVAKEFGIPVQFQRFWLWGTRQNYTYRPDRPLTPQEETKSVEQLMNLQPKAHHA 534
            F++FKEEVAKEFGIPVQFQRFWLW  RQN+TYRP+RPLTP EE +SV Q+  +  K H+A
Sbjct: 606  FNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPAEEAQSVGQVREVSNKVHNA 665

Query: 535  ELKLFLEVELGPDFHLIQPPKKTKEDILIFFKLYDPITEELRYVGRLFVKGSGTPSEILT 714
            ELKLFLEVELGPD   I P  KTK+DIL+FFKLYDP  EELRYVGRLFVK +G PSEILT
Sbjct: 666  ELKLFLEVELGPDLRPIAPSDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILT 725

Query: 715  KLNVMAGFSSSQEIELYEEIKFEPSVMCERIDKKRSFLAGQIEDGDIICFQKSPPVESWE 894
            +LN MAG+   +EI LYEEIKFEP+VMCE IDKK +F A Q+EDGDIICFQK+P ++S E
Sbjct: 726  RLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPAMDSEE 785

Query: 895  QCRYPDVPSFLEYVHNRQVVHFRAREKPKENDFCLELSKLFDYDDVVKKVAAQLGVHDPS 1074
              RYPDVPS+LEYVHNRQVVHFR+ +KPKE+DFCLE+S+L+ YDDVV+KVA QL + DPS
Sbjct: 786  HVRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLDDPS 845

Query: 1075 KIRL 1086
            KIRL
Sbjct: 846  KIRL 849



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 43/83 (51%), Positives = 62/83 (74%)
 Frame = +1

Query: 1   VVNQVYSQYTVRKGVQECDYHQFIYDKTYHGFTSFMPFSVLHNPSKGFLVNNTLIVKAEV 180
           VVNQ+ ++YTVRK  Q    HQF   ++  GFTSFMP   L++PS+G+L+N+TL+V+AEV
Sbjct: 124 VVNQIQNKYTVRKDTQ----HQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVEAEV 179

Query: 181 SIRKVVEYCSYDSKKEALYTIIK 249
            +R++V+Y +YDSKKE  Y  +K
Sbjct: 180 LVRRIVDYWTYDSKKETGYVGLK 202