BLASTX nr result

ID: Cimicifuga21_contig00001264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001264
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group] g...    81   8e-14
gb|AFW88085.1| putative ribosomal protein S8 family protein [Zea...    80   2e-13
ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [S...    80   2e-13
ref|NP_001151977.1| LOC100285614 [Zea mays] gi|195651477|gb|ACG4...    80   2e-13
ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like...    80   2e-13

>ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group]
           gi|50251667|dbj|BAD29691.1| putative 40S ribosomal
           protein S15A [Oryza sativa Japonica Group]
           gi|113535993|dbj|BAF08376.1| Os02g0255200 [Oryza sativa
           Japonica Group] gi|125538846|gb|EAY85241.1| hypothetical
           protein OsI_06614 [Oryza sativa Indica Group]
           gi|125581523|gb|EAZ22454.1| hypothetical protein
           OsJ_06122 [Oryza sativa Japonica Group]
           gi|215768335|dbj|BAH00564.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 129

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +1

Query: 4   LPTRQWGYIVITTPNGVLDHEEAMKQNVGGQVLGYFH 114
           LPTRQWGY+VITTPNGVLDHEEA+KQNVGGQVLGYFH
Sbjct: 93  LPTRQWGYVVITTPNGVLDHEEAIKQNVGGQVLGYFH 129


>gb|AFW88085.1| putative ribosomal protein S8 family protein [Zea mays]
          Length = 129

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 4   LPTRQWGYIVITTPNGVLDHEEAMKQNVGGQVLGYFH 114
           LPTRQWGY+VITTPNGVLDHEEA++QNVGGQVLGYFH
Sbjct: 93  LPTRQWGYVVITTPNGVLDHEEAIRQNVGGQVLGYFH 129


>ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [Sorghum bicolor]
           gi|241919010|gb|EER92154.1| hypothetical protein
           SORBIDRAFT_01g032870 [Sorghum bicolor]
          Length = 129

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 4   LPTRQWGYIVITTPNGVLDHEEAMKQNVGGQVLGYFH 114
           LPTRQWGY+VITTPNGVLDHEEA++QNVGGQVLGYFH
Sbjct: 93  LPTRQWGYVVITTPNGVLDHEEAIRQNVGGQVLGYFH 129


>ref|NP_001151977.1| LOC100285614 [Zea mays] gi|195651477|gb|ACG45206.1| 40S ribosomal
           protein S15a [Zea mays]
          Length = 129

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 4   LPTRQWGYIVITTPNGVLDHEEAMKQNVGGQVLGYFH 114
           LPTRQWGY+VITTPNGVLDHEEA++QNVGGQVLGYFH
Sbjct: 93  LPTRQWGYVVITTPNGVLDHEEAIRQNVGGQVLGYFH 129


>ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like [Brachypodium
           distachyon]
          Length = 129

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +1

Query: 4   LPTRQWGYIVITTPNGVLDHEEAMKQNVGGQVLGYFH 114
           LPTRQWGY+V+TTPNGVLDHEEA++QNVGGQVLGYFH
Sbjct: 93  LPTRQWGYVVVTTPNGVLDHEEAIRQNVGGQVLGYFH 129


Top