BLASTX nr result

ID: Cimicifuga21_contig00001242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001242
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267...   356   7e-96
ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208...   333   6e-89
ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|2...   329   9e-88
ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp....   311   2e-82
dbj|BAC42209.1| unknown protein [Arabidopsis thaliana]                311   2e-82

>ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267906 [Vitis vinifera]
            gi|296090259|emb|CBI40078.3| unnamed protein product
            [Vitis vinifera]
          Length = 252

 Score =  356 bits (914), Expect = 7e-96
 Identities = 171/247 (69%), Positives = 203/247 (82%), Gaps = 2/247 (0%)
 Frame = +2

Query: 341  SVITSIPTLPVFFLMFMVIYLLAYFGVFRNWNPKLIPEASSCLISFAHGTPAVFLAFFAI 520
            +++ S+P LP+FF +F+ IYL+ YF VFRNW+PK+ PEASSC IS AHGTPAV LA FA+
Sbjct: 5    TLVHSLPNLPIFFFLFLAIYLVGYFVVFRNWSPKIRPEASSCFISLAHGTPAVVLASFAL 64

Query: 521  ATHSQRGFAAPNTYFQNTALDYSIAYFLTDLIHYLYFYPSDVLFIAHHLATLFVIVTCRY 700
               SQRGFAAPNT FQ   LDYSIAYFL DL HYL F+PSD+LFI HHLATLFV VTCRY
Sbjct: 65   YADSQRGFAAPNTAFQGLVLDYSIAYFLMDLCHYLVFFPSDILFIGHHLATLFVFVTCRY 124

Query: 701  LVFHGAFAILGLIVLAEITSFCQNTWTLASARRTDVPIAAKLYELMSPSFYAFYSVVRGF 880
            +VFHG++AIL L+VLAE+TS  QNTWTLA A ++DV  AAK+YEL+SP FYAFYSVVRGF
Sbjct: 125  VVFHGSYAILVLLVLAEVTSAFQNTWTLAGALKSDVATAAKVYELLSPPFYAFYSVVRGF 184

Query: 881  VGPMFVYQMGVFYLSGKADDVIPRWVSVSWITVVVLAISVSILWIGNLWLDLYREKMNLV 1060
            +GP+F+Y+MGVF+LSG AD VIPRWV VSWI VV+ AI VSILWI NLW +LYRE+   +
Sbjct: 185  IGPLFMYKMGVFFLSGAADHVIPRWVWVSWIFVVLSAIMVSILWISNLWAELYRERKTKL 244

Query: 1061 EK--KKV 1075
            +K  KKV
Sbjct: 245  QKLEKKV 251


>ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208807 [Cucumis sativus]
            gi|449530839|ref|XP_004172399.1| PREDICTED:
            uncharacterized protein LOC101230318 [Cucumis sativus]
          Length = 244

 Score =  333 bits (854), Expect = 6e-89
 Identities = 157/240 (65%), Positives = 192/240 (80%)
 Frame = +2

Query: 350  TSIPTLPVFFLMFMVIYLLAYFGVFRNWNPKLIPEASSCLISFAHGTPAVFLAFFAIATH 529
            T +  LP FF +F  IY++AYF +FRNW+PK+ PEA+SC ISFAHGTPAVFLA  AI + 
Sbjct: 3    THLNPLPFFFSIFFTIYVIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILSD 62

Query: 530  SQRGFAAPNTYFQNTALDYSIAYFLTDLIHYLYFYPSDVLFIAHHLATLFVIVTCRYLVF 709
            + RGFA+PN+  QN  LDYSIAYFL DL+HYL F+PSD+LFIAHHL TLFV VTCRYLV 
Sbjct: 63   AGRGFASPNSDLQNLVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVS 122

Query: 710  HGAFAILGLIVLAEITSFCQNTWTLASARRTDVPIAAKLYELMSPSFYAFYSVVRGFVGP 889
            HGA+AIL L++LAE+TSFCQN WTLA ARR DV  A ++Y ++SP FY  YS+VRGFVGP
Sbjct: 123  HGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGP 182

Query: 890  MFVYQMGVFYLSGKADDVIPRWVSVSWITVVVLAISVSILWIGNLWLDLYREKMNLVEKK 1069
             F+Y+MG F+ +G A+ VIP WV +SWI VV  AISVSILWI NLW++LYRE+ + +EKK
Sbjct: 183  YFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLEKK 242


>ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|222847343|gb|EEE84890.1|
            predicted protein [Populus trichocarpa]
          Length = 247

 Score =  329 bits (844), Expect = 9e-88
 Identities = 156/245 (63%), Positives = 194/245 (79%)
 Frame = +2

Query: 335  MESVITSIPTLPVFFLMFMVIYLLAYFGVFRNWNPKLIPEASSCLISFAHGTPAVFLAFF 514
            ME++I S+P LP+ F  F+ IYL A+F VFRNW+PK+ PEA+SCLIS  HGTPAVFLA  
Sbjct: 1    METLIKSLPDLPILFAFFLTIYLAAHFLVFRNWSPKIRPEAASCLISIFHGTPAVFLATH 60

Query: 515  AIATHSQRGFAAPNTYFQNTALDYSIAYFLTDLIHYLYFYPSDVLFIAHHLATLFVIVTC 694
            A+ T+  RGF++ NT  + + LDYSI+YFL DLIHYL F PSD+LFI HHLATLFV VTC
Sbjct: 61   ALFTNPNRGFSSLNTKTEASVLDYSISYFLMDLIHYLIFSPSDILFIGHHLATLFVFVTC 120

Query: 695  RYLVFHGAFAILGLIVLAEITSFCQNTWTLASARRTDVPIAAKLYELMSPSFYAFYSVVR 874
            RYLV  GA+A+L L++LAE+TS CQN WTLA+ARR DV  AAK+Y+ +S  FYAFYSVVR
Sbjct: 121  RYLVARGAYAVLMLLILAEVTSACQNAWTLANARRIDVEFAAKVYDFLSLPFYAFYSVVR 180

Query: 875  GFVGPMFVYQMGVFYLSGKADDVIPRWVSVSWITVVVLAISVSILWIGNLWLDLYREKMN 1054
            G +GP FVYQMG F++SG    +IP+W+ VSW+ VVV+AISVSILW+ NLW+ LYRE+  
Sbjct: 181  GILGPYFVYQMGAFFISGVDGGIIPKWIWVSWLFVVVIAISVSILWVTNLWVQLYRERSA 240

Query: 1055 LVEKK 1069
             +EKK
Sbjct: 241  KLEKK 245


>ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317449|gb|EFH47871.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 553

 Score =  311 bits (798), Expect = 2e-82
 Identities = 149/234 (63%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
 Frame = +2

Query: 353  SIPTLPVFFLMFMVIYLLAYFGVFRNWNPKLIPEASSCLISFAHGTPAVFLAFFAIATHS 532
            SIP LP+FF MF+ IYL+AYF VFRNW P++ PEASSCLIS  HGTPAVFLA  A+ + S
Sbjct: 314  SIPDLPLFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGTPAVFLATRAVFSSS 373

Query: 533  QRGFAAPNTYFQNTALDYSIAYFLTDLIHYLYFYPSDVLFIAHHLATLFVIVTCRYLVFH 712
             R FA+ NT  QNT LD+S+AYFLTDL HY+ F P+DVLFI HHLATLFV +TCR+LVFH
Sbjct: 374  ARSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHLATLFVFLTCRFLVFH 433

Query: 713  GAFAILGLIVLAEITSFCQNTWTLASARRTDVP--IAAKLYELMSPSFYAFYSVVRGFVG 886
            GA AILGL++LAE+TS CQN WTLA AR+ D    +A K+Y+L+SP FYAFYS+VRG +G
Sbjct: 434  GACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLG 493

Query: 887  PMFVYQMGVFYLSGKADDVIPRWVSVSWITVVVLAISVSILWIGNLWLDLYREK 1048
            P+F  +M  FY  G A  VIP W+ +SW  VV  AI+VSILWI NLW++L+R++
Sbjct: 494  PLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGTAITVSILWIWNLWIELFRQR 547


>dbj|BAC42209.1| unknown protein [Arabidopsis thaliana]
          Length = 254

 Score =  311 bits (797), Expect = 2e-82
 Identities = 151/245 (61%), Positives = 188/245 (76%), Gaps = 3/245 (1%)
 Frame = +2

Query: 353  SIPTLPVFFLMFMVIYLLAYFGVFRNWNPKLIPEASSCLISFAHGTPAVFLAFFAIATHS 532
            SIP LP+FF MF+ IYL+AYF VFRNW P++ PEASSCLIS  HG+PAVFLA  A+ + S
Sbjct: 9    SIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSSS 68

Query: 533  QRGFAAPNTYFQNTALDYSIAYFLTDLIHYLYFYPSDVLFIAHHLATLFVIVTCRYLVFH 712
            +R FA+ NT  QNT LD+S+AYFLTDL HY+ F P+DVLFI HH+ATLFV +TCR+LVFH
Sbjct: 69   ERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFH 128

Query: 713  GAFAILGLIVLAEITSFCQNTWTLASARRTDVP--IAAKLYELMSPSFYAFYSVVRGFVG 886
            GA AILGL++LAE+TS CQN WTLA AR+ D    +A K+Y+L+SP FYAFYS+VRG +G
Sbjct: 129  GACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLG 188

Query: 887  PMFVYQMGVFYLSGKADDVIPRWVSVSWITVVVLAISVSILWIGNLWLDLYRE-KMNLVE 1063
            P+F  +M  FY  G A  VIP W+ +SW  VV +AI+VSILWI NLW++L+ E K N + 
Sbjct: 189  PLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANKIR 248

Query: 1064 KKKVI 1078
              K I
Sbjct: 249  VDKKI 253


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