BLASTX nr result
ID: Cimicifuga21_contig00001236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001236
(3154 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containin... 508 e-141
ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|2... 500 e-139
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 497 e-138
ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin... 496 e-137
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin... 492 e-136
>ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 704
Score = 508 bits (1307), Expect = e-141
Identities = 298/542 (54%), Positives = 335/542 (61%), Gaps = 13/542 (2%)
Frame = -2
Query: 2325 NSDLFYPQPNDLATSPNNNSDSMLFSPYWASMSNGNHRRSCSVTDLCLGSNDPLGSSLGW 2146
N D+FYP +DL++SP +D LF Y HRRSCSV D CLG+ DP S LGW
Sbjct: 176 NPDMFYPSNSDLSSSPTTAADPTLFPSY--GWGGSLHRRSCSVNDACLGTEDP-NSGLGW 232
Query: 2145 KPCLYFARGYCKNGTSCRFLHGLPDSPDSNSLVGSPNKLDVMEQCQEXXXXXXXXXXXXX 1966
KPCLYFARGYCKNGTSCRFLHG D+ ++VGSP+K+++MEQC E
Sbjct: 233 KPCLYFARGYCKNGTSCRFLHGGLGDADA-AMVGSPSKIEMMEQCHELLRSKSGQQQRLA 291
Query: 1965 XXXXXXXXXXXXXSFPYSPTSANSKCMNFLLQQQQNDTQRAA---LMLGEDAHKFSNRSR 1795
FPYSP KCMNFLLQQQQNDTQRAA LM+ ED HKF RSR
Sbjct: 292 AASQLMASST----FPYSP-----KCMNFLLQQQQNDTQRAAAAALMMSEDLHKFG-RSR 341
Query: 1794 IERNDYLNSLGGMVMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 1615
+ERND+ + GMV NP SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF
Sbjct: 342 LERNDFSLNSPGMV-NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 400
Query: 1614 GFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKXXXXXXQMERGEFSACT 1435
GFVTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDK Q++RG+FS C
Sbjct: 401 GFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKLQQQQVDRGDFSPCG 460
Query: 1434 TPTGLDSRDPYDLQLGGRMFNATQDMLLRRKLEEQVELQQAIELQSRRFMGLQLLDIKKQ 1255
TPTGLD+RD +DLQLGGRMF TQDML RRKLEEQ +LQQA+ELQSRR MGLQLLDIKK
Sbjct: 461 TPTGLDARDQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK- 519
Query: 1254 HHHQRNLS--SPSPTNPYSPH-FNH---APIHXXXXXXXXXXXXXXXNCMSPAIGDKPAV 1093
HHQR LS SP P+ +SP+ FN H ++ + V
Sbjct: 520 -HHQRALSAGSPIPSPTHSPNMFNQNLVPSFHITSEAPKESGSSSAPASIASVSVGQQQV 578
Query: 1092 KMNAEKEETXXXXXXXXXXXGKESPKHDQSDFHNGSEHNLPDSPFASPTKSD----VXXX 925
++ KE GK+S H+ D EHNLPDSPFASPTK+D V
Sbjct: 579 NISVGKEVDVNGENGYDEGNGKQSSSHEDRDLQECLEHNLPDSPFASPTKADGDFMVAFS 638
Query: 924 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSCFFQIPRFSSDHGAIGM*VRT 745
+FKS QIPRFSS HG IGM T
Sbjct: 639 NGSNEAIDADGLAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFSSGHGTIGMFAGT 698
Query: 744 SG 739
G
Sbjct: 699 GG 700
Score = 111 bits (278), Expect = 1e-21
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = -2
Query: 2934 MDAYEATRIVFSRIQSIDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 2755
MD YEATRIVFSRIQ++DPENASKIMG+LL+QDHGEKEMIRLAFGPEALVHSVILKARK+
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
>ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|222841330|gb|EEE78877.1|
predicted protein [Populus trichocarpa]
Length = 680
Score = 500 bits (1288), Expect = e-139
Identities = 300/553 (54%), Positives = 336/553 (60%), Gaps = 18/553 (3%)
Frame = -2
Query: 2337 IGPKNSDLFYPQPNDLATSPNNNSDSMLFSPYWASMSNGNHRRSCSVTDLCLGSNDPLGS 2158
+GPK+SDLFYPQ D +SP SDSM+F YW HRRSCSV+D+ LGS DP S
Sbjct: 151 LGPKSSDLFYPQL-DALSSPTGASDSMMFPSYWGGSV---HRRSCSVSDV-LGSEDP-NS 204
Query: 2157 SLGWKPCLYFARGYCKNGTSCRFLHGLPDSPDSNSLVGSPN---KLDVMEQCQEXXXXXX 1987
GW+PCLYFARGYCKNG++CRF+HG D +VGSPN K+D+M+QC E
Sbjct: 205 GFGWRPCLYFARGYCKNGSNCRFVHGGLGELDGAGVVGSPNSNNKIDMMDQCHELLRSKS 264
Query: 1986 XXXXXXXXXXXXXXXXXXXXSFPYSPTSANSKCMNFLLQQQQNDTQRAA---LMLGEDAH 1816
FPYSP K MNFLLQQQQND+QRAA LM+GED H
Sbjct: 265 AHQQRLAAASQLMSSSAAS--FPYSP-----KSMNFLLQQQQNDSQRAAATALMMGEDMH 317
Query: 1815 KFSNRSRIERNDYLNSLGGMVMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 1636
KF RSR++RND ++NP SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP
Sbjct: 318 KFG-RSRLDRND--------LVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 368
Query: 1635 YQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKXXXXXXQMER 1456
YQQKRMFGFVTFVYPETVK+ILAKGNPHFVCDARVLVKPYKEKGKVPDKK Q+ER
Sbjct: 369 YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKK--QQQQQVER 426
Query: 1455 GEFSACTTPTGLDSRDPYDLQLGGRMFNATQDMLLRRKLEEQVELQQAIELQSRRFMGLQ 1276
GEFS C TPTGLDSRDP+DLQLG RMF TQDML RRKLEEQ +LQQA+ELQSRR M LQ
Sbjct: 427 GEFSPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALELQSRRLMSLQ 486
Query: 1275 LLDIKKQHHHQRNLSSPSPTNPYSPH-FNHA----PIHXXXXXXXXXXXXXXXNCMSPAI 1111
LLD+KK HH + SP P+ +SP+ FNH+ P+H A
Sbjct: 487 LLDVKKHHHRALSNGSPVPSPTHSPNIFNHSLAFPPLHSSTEVPQENCSSSMPATSVTAP 546
Query: 1110 GDKPAVKMNAEKEETXXXXXXXXXXXGKESPKHDQSDFHNGSEHNLPDSPFASPTKSD-- 937
+K + KE T GKES + SD EHNLPDSPFASPTK
Sbjct: 547 PEKQISNATSGKEYT----SSEENGSGKESSHGEDSDLQESLEHNLPDSPFASPTKGTGD 602
Query: 936 -----VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSCFFQIPRFSSDH 772
+ SFKS QIPRFSS H
Sbjct: 603 YYSAFINGLTEAREKDASIPTSTSANNNLVPSSLISPNSSLEMASFKSFNCQIPRFSSGH 662
Query: 771 GAIGM*VRTSGLT 733
GAIGM T G T
Sbjct: 663 GAIGMYASTDGPT 675
Score = 70.1 bits (170), Expect = 4e-09
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -2
Query: 2859 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 2755
MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARK+
Sbjct: 1 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 35
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 497 bits (1279), Expect = e-138
Identities = 289/519 (55%), Positives = 327/519 (63%), Gaps = 23/519 (4%)
Frame = -2
Query: 2256 LFSPYWASMSNGNHRRSCSVTDLCLGSNDPLGSSLGWKPCLYFARGYCKNGTSCRFLHGL 2077
L SP A+ + HRRSCSV+D+CL S+DP S GWKPCLYFARGYCKNGTSCRFLHG
Sbjct: 115 LISPNSAAANGLPHRRSCSVSDICLASDDP-ASGFGWKPCLYFARGYCKNGTSCRFLHGG 173
Query: 2076 PDSP----DSNSLVGSPNKLDVMEQCQEXXXXXXXXXXXXXXXXXXXXXXXXXXSFPYSP 1909
+ + ++VGSP+K+++MEQC E FPYS
Sbjct: 174 DSASVVGSEGAAMVGSPSKIEMMEQCHELLRSKSAQQQRLAAASQIMASAS----FPYS- 228
Query: 1908 TSANSKCMNFLLQQQQNDTQRAA--LMLGEDAHKFSNRSRIERNDYLNSLGGMVMNPGSR 1735
+KCMNFLLQQQQ D+QRAA LM+G+D HKF RSR+ER +++N GMV NPGSR
Sbjct: 229 ----AKCMNFLLQQQQTDSQRAAAALMMGDDMHKFG-RSRLERGEFMNGGAGMV-NPGSR 282
Query: 1734 QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP 1555
QIYLTFPADSTFREEDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP
Sbjct: 283 QIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP 342
Query: 1554 HFVCDARVLVKPYKEKGKVPDKKXXXXXXQMERGEFSACTTPTGLDSRDPYDLQLGGRMF 1375
HFVCDARVLVKPYKEKGKVPDKK Q+ERGEFSAC+TPTGLDSRDPYDLQLG RMF
Sbjct: 343 HFVCDARVLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMF 402
Query: 1374 NATQDMLLRRKLEEQVELQQAIELQSRRFMGLQLLDIKKQHHHQR-NLSSPSPTNPYSPH 1198
TQDML RRKLEEQ +LQQAIELQ RR MGLQLLD+KKQ HH+ + +P P+ +SP
Sbjct: 403 YNTQDMLWRRKLEEQADLQQAIELQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPS 462
Query: 1197 FNHAPIHXXXXXXXXXXXXXXXNCMSPAIG----------DKPAVKMNAEKEETXXXXXX 1048
F + P+ NC SPA + V AEKE T
Sbjct: 463 FFNQPL--ILPSDRSSPEAPEENCSSPATAIPVNAVAAEQQQQTVTTAAEKEFT--GIDE 518
Query: 1047 XXXXXGKESPKHDQSDFHNGSEHNLPDSPFASPTK------SDVXXXXXXXXXXXXXXXX 886
GKES ++ SD EHNLPDSPFASPTK S
Sbjct: 519 NGNGTGKESSHNEDSDLPESLEHNLPDSPFASPTKGAGEYLSTFSNASSEVEKNTTVSGS 578
Query: 885 XXXXXXXXXXXXXXXXXXXXXXSFKSCFFQIPRFSSDHG 769
SFKSC+FQ+PRFSS HG
Sbjct: 579 PAVNGNLITSSLLPATSTLDMASFKSCYFQMPRFSSGHG 617
Score = 115 bits (287), Expect = 1e-22
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = -2
Query: 2934 MDAYEATRIVFSRIQSIDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 2755
MDAYEATRIVFSRIQ++DPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARK+
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 700
Score = 496 bits (1277), Expect = e-137
Identities = 302/547 (55%), Positives = 329/547 (60%), Gaps = 18/547 (3%)
Frame = -2
Query: 2325 NSDLFYPQPN-DLATSPNNNSDSMLFSPYWASMSNGNHRRSCSVTDLCLGSNDPLGSSLG 2149
N DLFYP N DL++SP D LF Y HRRSCSV D CLGS DP S LG
Sbjct: 170 NPDLFYPTNNSDLSSSPTTAVDPTLFPSY--GWGGSIHRRSCSVNDACLGSEDP-SSGLG 226
Query: 2148 WKPCLYFARGYCKNGTSCRFLHGLPDSPDSN---SLVGSPNKLDVMEQCQEXXXXXXXXX 1978
WKPCLYFARGYCKNGTSCRFLHG D ++VGSP K+++MEQC E
Sbjct: 227 WKPCLYFARGYCKNGTSCRFLHGGIGDADGGGAAAMVGSPGKIEMMEQCHELLRSKSVQQ 286
Query: 1977 XXXXXXXXXXXXXXXXXSFPYSPTSANSKCMNFLLQQQQNDTQRAA---LMLGEDAHKFS 1807
FPYSP K MNFLLQQQQNDTQRAA LM+ ED HKF
Sbjct: 287 QRLAAASQLMASST----FPYSP-----KSMNFLLQQQQNDTQRAAAAALMMSEDLHKFG 337
Query: 1806 NRSRIERNDYLNSLGGMVM-NPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 1630
RSR+ERND+ SL VM NP SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ
Sbjct: 338 -RSRLERNDF--SLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 394
Query: 1629 QKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKXXXXXXQMERGE 1450
QKRMFGFVTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKK Q++RG+
Sbjct: 395 QKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKK---QQQQVDRGD 451
Query: 1449 FSACTTPTGLDSRDPYDLQLGGRMFNATQDMLLRRKLEEQVELQQAIELQSRRFMGLQLL 1270
FS C TPTGLD+RD +DLQLGGRM TQDML RRKLEEQ +LQQA+ELQSRR MGLQLL
Sbjct: 452 FSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLL 511
Query: 1269 DIKKQHHHQRNLS--SPSPTNPYSPH-FNH---APIHXXXXXXXXXXXXXXXNCMSPAIG 1108
DIKK HHQR LS SP P+ +SP+ FN H +
Sbjct: 512 DIKK--HHQRALSTGSPIPSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVSA 569
Query: 1107 DKPAVKMNAEKEETXXXXXXXXXXXGKESPKHDQSDFHNGSEHNLPDSPFASPTKSD--- 937
+ V ++ KE GK+S HD D EHNLPDSPFASPTK D
Sbjct: 570 GQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTKGDGDF 629
Query: 936 -VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSCFFQIPRFSSDHGAIG 760
V +FKS QIPRFSS HG IG
Sbjct: 630 LVAFSNGPNEANDADASAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFSSGHGTIG 689
Query: 759 M*VRTSG 739
M T G
Sbjct: 690 MFAGTGG 696
Score = 111 bits (278), Expect = 1e-21
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = -2
Query: 2934 MDAYEATRIVFSRIQSIDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 2755
MD YEATRIVFSRIQ++DPENASKIMG+LL+QDHGEKEMIRLAFGPEALVHSVILKARK+
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 696
Score = 492 bits (1266), Expect = e-136
Identities = 302/551 (54%), Positives = 334/551 (60%), Gaps = 22/551 (3%)
Frame = -2
Query: 2325 NSDLFYPQPN-DLATSPNNNSDSMLF-SPYWASMSNGNHRRSCSVTDLCLGSNDPLGSSL 2152
N DLFYP N DL++SP +D LF S W HRRSCSV+D CLGS DP S L
Sbjct: 163 NPDLFYPNNNSDLSSSPTTAADPTLFPSDGWGGSL---HRRSCSVSDACLGSEDP-NSGL 218
Query: 2151 GWKPCLYFARGYCKNGTSCRFLHGLPDSPD----SNSLVGSPNKLDVMEQCQEXXXXXXX 1984
GWKPCLYFARGYCKNGTSCRFLHG D + ++VGSP+K+++MEQC E
Sbjct: 219 GWKPCLYFARGYCKNGTSCRFLHGGLGDADVGGAAAAMVGSPSKIEMMEQCHELLRSKSF 278
Query: 1983 XXXXXXXXXXXXXXXXXXXSFPYSPTSANSKCMNFLLQQQQNDTQRAA---LMLGEDAHK 1813
FPYSP K MNFLLQQQQNDTQRAA LM+ ED HK
Sbjct: 279 QQQRLAAASQLMASSI----FPYSP-----KSMNFLLQQQQNDTQRAAAAALMMSEDLHK 329
Query: 1812 FSNRSRIERNDYLNSLGGMVM-NPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 1636
F RSR+ERND+ SL VM NP SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP
Sbjct: 330 FG-RSRLERNDF--SLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 386
Query: 1635 YQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKXXXXXXQMER 1456
YQQKRMFGFVTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKK Q++R
Sbjct: 387 YQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKK---QQQQVDR 443
Query: 1455 GEFSACTTPTGLDSRDPYDLQLGGRMFNATQDMLLRRKLEEQVELQQAIELQSRRFMGLQ 1276
G+FS C TPTGLD+RD +DLQLGGRM TQDML RRKLEEQ +LQQA+ELQSRR MGLQ
Sbjct: 444 GDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQ 503
Query: 1275 LLDIKKQHHHQRNLS--SPSPTNPYSPH-FNH---APIHXXXXXXXXXXXXXXXNCMSPA 1114
LLDIKK HHQR LS SP P+ +SP+ FN H +
Sbjct: 504 LLDIKK--HHQRALSTGSPIPSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASV 561
Query: 1113 IGDKPAVKMNAEKEETXXXXXXXXXXXGKESPKHDQSDFHNGSEHNLPDSPFASPTKSDV 934
+ V ++ KE GK+S HD D EHNLPDSPFASPTK+ V
Sbjct: 562 SAGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTKAAV 621
Query: 933 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSCFFQIPRFSSDH 772
+FKS QIPRFSS H
Sbjct: 622 PGDFMAPFSNGPNVAIDTDASAASVNFKFGTSTLLPAASPLDMGTFKSYNCQIPRFSSGH 681
Query: 771 GAIGM*VRTSG 739
G IGM T G
Sbjct: 682 GTIGMFTGTGG 692
Score = 111 bits (278), Expect = 1e-21
Identities = 53/60 (88%), Positives = 60/60 (100%)
Frame = -2
Query: 2934 MDAYEATRIVFSRIQSIDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 2755
MD+YEATR+VFSRIQ++DPENASKIMGLLL+QDHGEKE+IRLAFGPEALVHSVILKARK+
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60