BLASTX nr result

ID: Cimicifuga21_contig00001180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001180
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   213   3e-53
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   213   3e-53
ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus comm...   213   5e-53
gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]        212   8e-53
gb|AEW43294.1| putative ribosomal protein S9, partial [Hevea bra...   212   8e-53

>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  213 bits (543), Expect = 3e-53
 Identities = 112/155 (72%), Positives = 115/155 (74%)
 Frame = -3

Query: 741 SVQCFGRKKTAVAVTHCKRGKGLIKINGCPIELVEPEILRYKAYEPILLLGRHRFAGVDM 562
           SVQCFGRKKTAVAVTHCKRG+GLIKINGCPIELVEPEILR+KAYEPILLLGRHRFAGVDM
Sbjct: 7   SVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDM 66

Query: 561 RIRVRGGGHTSQIYAIRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDI 382
           RIRV+GGGHTSQIYAIRQ                                        DI
Sbjct: 67  RIRVKGGGHTSQIYAIRQ-----------------SIAKALVAYYQKFVDEQSKKEIKDI 109

Query: 381 LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 277
           LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 110 LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 144


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  213 bits (543), Expect = 3e-53
 Identities = 112/155 (72%), Positives = 115/155 (74%)
 Frame = -3

Query: 741 SVQCFGRKKTAVAVTHCKRGKGLIKINGCPIELVEPEILRYKAYEPILLLGRHRFAGVDM 562
           SVQCFGRKKTAVAVTHCKRG+GLIKINGCPIELVEPEILR+KAYEPILLLGRHRFAGVDM
Sbjct: 14  SVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDM 73

Query: 561 RIRVRGGGHTSQIYAIRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDI 382
           RIRV+GGGHTSQIYAIRQ                                        DI
Sbjct: 74  RIRVKGGGHTSQIYAIRQ-----------------SIAKALVAYYQKYVDEQSKKEIKDI 116

Query: 381 LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 277
           LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 117 LVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 151


>ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223532779|gb|EEF34558.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 152

 Score =  213 bits (541), Expect = 5e-53
 Identities = 112/158 (70%), Positives = 115/158 (72%)
 Frame = -3

Query: 750 TVPSVQCFGRKKTAVAVTHCKRGKGLIKINGCPIELVEPEILRYKAYEPILLLGRHRFAG 571
           T  SVQCFGRKKTAVAVTHCKRG+GLIKINGCPIELVEPEILR+KAYEPILLLGRHRFA 
Sbjct: 12  TTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAA 71

Query: 570 VDMRIRVRGGGHTSQIYAIRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 391
           VDMRIRV+GGGHTSQIYAIRQ                                       
Sbjct: 72  VDMRIRVKGGGHTSQIYAIRQ-----------------SIAKALVAYYQKFVDEQSKKEI 114

Query: 390 XDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 277
            DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 115 KDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 152


>gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]
          Length = 147

 Score =  212 bits (539), Expect = 8e-53
 Identities = 111/157 (70%), Positives = 116/157 (73%)
 Frame = -3

Query: 747 VPSVQCFGRKKTAVAVTHCKRGKGLIKINGCPIELVEPEILRYKAYEPILLLGRHRFAGV 568
           + SVQCFGRKKTAVAVT+CKRG+GLIKINGCPIELVEPEILR+KAYEPILLLGRHRFAGV
Sbjct: 8   IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 67

Query: 567 DMRIRVRGGGHTSQIYAIRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           DMRIRV+GGGHTSQIYAIRQ                                        
Sbjct: 68  DMRIRVKGGGHTSQIYAIRQ-----------------SIAKALVAFYQKYVDEQSKKEIK 110

Query: 387 DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 277
           DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 111 DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147


>gb|AEW43294.1| putative ribosomal protein S9, partial [Hevea brasiliensis]
          Length = 143

 Score =  212 bits (539), Expect = 8e-53
 Identities = 111/157 (70%), Positives = 116/157 (73%)
 Frame = -3

Query: 747 VPSVQCFGRKKTAVAVTHCKRGKGLIKINGCPIELVEPEILRYKAYEPILLLGRHRFAGV 568
           + SVQCFGRKKTAVAVT+CKRG+GLIKINGCPIELVEPEILR+KAYEPILLLGRHRFAGV
Sbjct: 4   IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 63

Query: 567 DMRIRVRGGGHTSQIYAIRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           DMRIRV+GGGHTSQIYAIRQ                                        
Sbjct: 64  DMRIRVKGGGHTSQIYAIRQ-----------------SIAKALVAFYQKYVDEQSKKEIK 106

Query: 387 DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 277
           DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 107 DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143


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