BLASTX nr result

ID: Cimicifuga21_contig00001148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001148
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308503.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20
ref|XP_002324786.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_002447236.1| hypothetical protein SORBIDRAFT_06g031060 [S...   100   3e-19
dbj|BAG91378.1| unnamed protein product [Oryza sativa Japonica G...    97   3e-18
ref|NP_001054103.1| Os04g0653000 [Oryza sativa Japonica Group] g...    97   3e-18

>ref|XP_002308503.1| predicted protein [Populus trichocarpa] gi|222854479|gb|EEE92026.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  102 bits (255), Expect = 5e-20
 Identities = 70/164 (42%), Positives = 82/164 (50%)
 Frame = -2

Query: 528 PPPAQLTIFYSGVVTVFDAVPADVAQNIMFFXXXXXXXXXXXXXXXXXNGCVPSTSASPV 349
           P P QLTIFY G V VFDA+PA+  Q IM                        S   +PV
Sbjct: 81  PTPDQLTIFYGGSVVVFDAIPAEKVQEIMLIAAAAAAAVKPVDMKKSG-----SPDGTPV 135

Query: 348 LTRSPSLQSTAAVEASPLPQLHSVPPSILKLQAELPIARRXXXXXXXXXXXXXXXXXXXX 169
           LTRSPS+QSTAA    P  Q +S   S  ++QAELPIARR                    
Sbjct: 136 LTRSPSMQSTAA----PHAQAYSRQNSFCRMQAELPIARRHS------------------ 173

Query: 168 XLQRFLEKRRDRLVSKSPYPPATPTKLAETAEGSLSAETASFCG 37
            LQRF EKRRDRLVSKSPYP +   K A+T +  +SA  +   G
Sbjct: 174 -LQRFFEKRRDRLVSKSPYPTSPEGKEADTTKPGISAAPSPDAG 216


>ref|XP_002324786.1| predicted protein [Populus trichocarpa] gi|222866220|gb|EEF03351.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  101 bits (251), Expect = 1e-19
 Identities = 68/157 (43%), Positives = 81/157 (51%)
 Frame = -2

Query: 528 PPPAQLTIFYSGVVTVFDAVPADVAQNIMFFXXXXXXXXXXXXXXXXXNGCVPSTSASPV 349
           P P QLTIFY G V VFD++PA+    IM                        S + +PV
Sbjct: 65  PTPDQLTIFYGGSVVVFDSIPAEKVHEIMLIAAAAVKPGDMKKSG--------SPTGTPV 116

Query: 348 LTRSPSLQSTAAVEASPLPQLHSVPPSILKLQAELPIARRXXXXXXXXXXXXXXXXXXXX 169
           LTRSPS+QSTAA    P  Q +S   SI ++QAELPIARR                    
Sbjct: 117 LTRSPSMQSTAA----PQGQTYSRQNSICRMQAELPIARRQS------------------ 154

Query: 168 XLQRFLEKRRDRLVSKSPYPPATPTKLAETAEGSLSA 58
            LQRF +KRRDRLVSKSPYP +   K A+T E  +SA
Sbjct: 155 -LQRFFKKRRDRLVSKSPYPTSPAGKEADTTEPGISA 190


>ref|XP_002447236.1| hypothetical protein SORBIDRAFT_06g031060 [Sorghum bicolor]
           gi|241938419|gb|EES11564.1| hypothetical protein
           SORBIDRAFT_06g031060 [Sorghum bicolor]
          Length = 274

 Score =  100 bits (248), Expect = 3e-19
 Identities = 70/168 (41%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
 Frame = -2

Query: 534 PTPPPAQLTIFYSGVVTVFDAVPADVAQNIMFF--------XXXXXXXXXXXXXXXXXNG 379
           P+  PAQLTIFY G V V+D+VP + AQ IM                             
Sbjct: 124 PSANPAQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAAATKGSAATAVKPPMMPAAT 183

Query: 378 CVPSTSASPVLTRSPSLQSTAAVEASPLPQLHSVPPSILKLQAELPIARRXXXXXXXXXX 199
             P+   SPVLTRSPSLQST+   A+  PQ+ + P SI KLQA+LPIARR          
Sbjct: 184 VAPAAVVSPVLTRSPSLQSTSV--ANGQPQVVADPSSICKLQADLPIARR---------- 231

Query: 198 XXXXXXXXXXXLQRFLEKRRDRLVSKSPYPPATPTKLAETAEGSLSAE 55
                      LQRFLEKRRDR+VSK+PY PA  +   E+    ++AE
Sbjct: 232 ---------HSLQRFLEKRRDRIVSKAPYSPAKSSDGMESPGMEVTAE 270


>dbj|BAG91378.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|215765296|dbj|BAG86993.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 153

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 73/170 (42%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
 Frame = -2

Query: 534 PTPPPAQLTIFYSGVVTVFDAVPADVAQNIMFFXXXXXXXXXXXXXXXXXNGCVP----- 370
           P P P+QLTIFY G V V+D+VP + AQ IM                       P     
Sbjct: 4   PPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIAVKPPVMPAA 63

Query: 369 ---STSASPVLTRSPSLQSTAAVEASPLPQLHSVPPSILKLQAELPIARRXXXXXXXXXX 199
                + SPVLTRS SLQST+   A+  PQ+ + P SI KLQA+LPIARR          
Sbjct: 64  NATQAAVSPVLTRSLSLQSTSV--ATGQPQVAADPSSICKLQADLPIARR---------- 111

Query: 198 XXXXXXXXXXXLQRFLEKRRDRLVSKSPYPPATPTKLAETAEGSLSAETA 49
                      LQRFLEKRRDRLVSK+PY    PTK +E  E S    TA
Sbjct: 112 ---------HSLQRFLEKRRDRLVSKAPY----PTKSSEGMEASGMEVTA 148


>ref|NP_001054103.1| Os04g0653000 [Oryza sativa Japonica Group]
           gi|113565674|dbj|BAF16017.1| Os04g0653000, partial
           [Oryza sativa Japonica Group]
          Length = 194

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 73/170 (42%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
 Frame = -2

Query: 534 PTPPPAQLTIFYSGVVTVFDAVPADVAQNIMFFXXXXXXXXXXXXXXXXXNGCVP----- 370
           P P P+QLTIFY G V V+D+VP + AQ IM                       P     
Sbjct: 45  PPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIAVKPPVMPAA 104

Query: 369 ---STSASPVLTRSPSLQSTAAVEASPLPQLHSVPPSILKLQAELPIARRXXXXXXXXXX 199
                + SPVLTRS SLQST+   A+  PQ+ + P SI KLQA+LPIARR          
Sbjct: 105 NATQAAVSPVLTRSLSLQSTSV--ATGQPQVAADPSSICKLQADLPIARR---------- 152

Query: 198 XXXXXXXXXXXLQRFLEKRRDRLVSKSPYPPATPTKLAETAEGSLSAETA 49
                      LQRFLEKRRDRLVSK+PY    PTK +E  E S    TA
Sbjct: 153 ---------HSLQRFLEKRRDRLVSKAPY----PTKSSEGMEASGMEVTA 189


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