BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001145
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   393   e-107
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   392   e-107
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   392   e-107
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   391   e-107
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   389   e-106

>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  393 bits (1009), Expect = e-107
 Identities = 189/205 (92%), Positives = 199/205 (97%), Gaps = 1/205 (0%)
 Frame = +2

Query: 65  MAASTMALSSPSLAGKALKVAPSASELLGEGRITMRKTGSKPKTV-SSSPWYGPDRVKYL 241
           MA+STMALSSPSLAGKA+K+ P+ASE++GEGRITMRKT  KPKTV SSSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 242 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 421
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 422 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 601
           ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 602 GPLGEVIDPLYPGGSFDPLGLAEDP 676
           GPLGEV+DPLYPGGSFDPLGLA+DP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDP 205


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  392 bits (1008), Expect = e-107
 Identities = 188/204 (92%), Positives = 195/204 (95%)
 Frame = +2

Query: 65  MAASTMALSSPSLAGKALKVAPSASELLGEGRITMRKTGSKPKTVSSSPWYGPDRVKYLG 244
           MAASTMALSSPS AG A+KVAPS+SEL G GRI+MRKTG KP   S SPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSFAGMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLG 60

Query: 245 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 424
           PFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 425 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGG 604
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180

Query: 605 PLGEVIDPLYPGGSFDPLGLAEDP 676
           PLGEV+DPLYPGGSFDPLGLAEDP
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDP 204


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  392 bits (1007), Expect = e-107
 Identities = 189/205 (92%), Positives = 199/205 (97%), Gaps = 1/205 (0%)
 Frame = +2

Query: 65  MAASTMALSSPSLAGKALKVAPSASELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYL 241
           MAASTMALSSPSLAG+A+K+APS+S+LLGEGR+TMRKT  +PK VSS SPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 242 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 421
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 422 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 601
           ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 602 GPLGEVIDPLYPGGSFDPLGLAEDP 676
           GPLGEV DP+YPGGSFDPLGLA+DP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDP 205


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  391 bits (1005), Expect = e-107
 Identities = 189/205 (92%), Positives = 199/205 (97%), Gaps = 1/205 (0%)
 Frame = +2

Query: 65  MAASTMALSSPSLAGKALKVAPSASELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYL 241
           MA+STMALSSPSLAGKA+K+APSASELLG GR++MRKTG +PK VSS SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYL 60

Query: 242 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 421
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 422 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 601
           ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQSILAIWATQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVLLMGAVEGYRIAG 180

Query: 602 GPLGEVIDPLYPGGSFDPLGLAEDP 676
           GPLGEVIDPLYPGGSFDPLGLA+DP
Sbjct: 181 GPLGEVIDPLYPGGSFDPLGLADDP 205


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  389 bits (1000), Expect = e-106
 Identities = 186/205 (90%), Positives = 198/205 (96%), Gaps = 1/205 (0%)
 Frame = +2

Query: 65  MAASTMALSSPSLAGKALKVAPSASELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYL 241
           MA+STMALSSPSLAGKA+K+ P+ASE+LGEGR+TMRKT  KPK VSS SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 242 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 421
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 422 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 601
           ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 602 GPLGEVIDPLYPGGSFDPLGLAEDP 676
           GPLGEV+DPLYPGGSFDPLGLA+DP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDP 205