BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001090
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda...   450   e-124
ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda...   438   e-120
ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD pre...   435   e-119
gb|AAO16018.1| chloroplast biogenesis protein [Lotus japonicus]       426   e-117
ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|2...   426   e-116

>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
            unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  450 bits (1158), Expect = e-124
 Identities = 244/338 (72%), Positives = 276/338 (81%), Gaps = 4/338 (1%)
 Frame = -2

Query: 1311 HKHHQRSINVHMKMLKKSS-TEDLGRDILTSSEANGNKDFLVKGLV--NAIAVANI-VPI 1144
            HKH      V +++ K+S+  EDL +DI++ S+   +  FL+K     +A A AN     
Sbjct: 22   HKHETGKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANFFATT 81

Query: 1143 DTANALTMENVMERAASLAAMADINLGDSFGGFLYSSGQSANEAVQDQLSALSFTSIAVI 964
            D A A  +++++E A S+  +AD ++GD FGGFLYS+GQ AN AVQDQLSALSFTS+AVI
Sbjct: 82   DMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTSLAVI 141

Query: 963  FGAGLVTSLSPCTLSVLPLTLGYIGASGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASF 784
            FGAGLVTSLSPCTLSVLPLTLGYIGA GSGK RAEVIGNSVAFS             ASF
Sbjct: 142  FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGVAASF 201

Query: 783  AGKAYGQIGQGLPIAASGVAVVMGLNLLEVIELQLPSFFNNVDPRAAAANFPSSVQAYLA 604
            AGKAYGQIGQGLP+AASG+AV+MGLNLLE+IELQLPSFFNN DPR+AAAN PSSVQAYLA
Sbjct: 202  AGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQAYLA 261

Query: 603  GLTFALAASPCSTPVLATLLGYVAASKDPIIGSSLLLTYTTGYVAPLLLAASFAGALQSL 424
            GLTFALAASPCSTPVLATLLGYVA SKDP+IG SLLLTYTTGYVAPLLLAASFAGALQSL
Sbjct: 262  GLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSL 321

Query: 423  LSFRKFSAWINPTSGALLLGGGMYTLLDKLFPMTTMAM 310
            LSFRKFSAWINPTSGALLLGGG+YTLLD+LFP T+M M
Sbjct: 322  LSFRKFSAWINPTSGALLLGGGIYTLLDRLFP-TSMVM 358


>ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2-like [Cucumis sativus]
            gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome
            c-type biogenesis ccda-like chloroplastic protein 2-like
            [Cucumis sativus]
          Length = 362

 Score =  438 bits (1127), Expect = e-120
 Identities = 235/332 (70%), Positives = 266/332 (80%), Gaps = 4/332 (1%)
 Frame = -2

Query: 1293 SINVHMKMLKKSSTEDLGRDILTSSEANGNKD----FLVKGLVNAIAVANIVPIDTANAL 1126
            S+  H+  +K   T+ +  D     E   N++    F     VNAI+  + + +D A A 
Sbjct: 32   SLGKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAE 91

Query: 1125 TMENVMERAASLAAMADINLGDSFGGFLYSSGQSANEAVQDQLSALSFTSIAVIFGAGLV 946
            T++++ E AAS+  +AD  +GD FGG LYS+GQ AN AVQDQLSALSFTS+AVIFGAG V
Sbjct: 92   TLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFV 151

Query: 945  TSLSPCTLSVLPLTLGYIGASGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGKAYG 766
            TSLSPCTLSVLPLTLGYIGA GSGKS+AEV+GNSVAFS             ASFAGKAYG
Sbjct: 152  TSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYG 211

Query: 765  QIGQGLPIAASGVAVVMGLNLLEVIELQLPSFFNNVDPRAAAANFPSSVQAYLAGLTFAL 586
            QIGQGLP+AASG+AV+MGLNLLE+IELQLPSFFNN DPR+AAANFPSSVQAYLAGLTFAL
Sbjct: 212  QIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFAL 271

Query: 585  AASPCSTPVLATLLGYVAASKDPIIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKF 406
            AASPCSTPVLATLLGYVA SKDPIIG SLLLTYTTGYV PLLLAASFAGALQSLLSFRKF
Sbjct: 272  AASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKF 331

Query: 405  SAWINPTSGALLLGGGMYTLLDKLFPMTTMAM 310
            S+WINP SGALLLGGG+YT LD+LFP+ TMAM
Sbjct: 332  SSWINPISGALLLGGGLYTFLDRLFPV-TMAM 362


>ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus
            communis] gi|223529374|gb|EEF31339.1| Thiol:disulfide
            interchange protein dsbD precursor, putative [Ricinus
            communis]
          Length = 350

 Score =  435 bits (1119), Expect = e-119
 Identities = 227/314 (72%), Positives = 264/314 (84%), Gaps = 1/314 (0%)
 Frame = -2

Query: 1260 SSTEDLGRDILTSSEANGNKDFLVKGLVNAIAVANIVPIDTANALTMENVMERAAS-LAA 1084
            S+ E+L R++L+ S+ +      +K +  ++AV+N++ ID A A++ + ++E A   +  
Sbjct: 34   STNENLRRNVLSLSKNDSRCSSRIKTIATSLAVSNLINIDAAKAVSTDKLLEEATIYMYT 93

Query: 1083 MADINLGDSFGGFLYSSGQSANEAVQDQLSALSFTSIAVIFGAGLVTSLSPCTLSVLPLT 904
            +AD  +GD  G  LYS+GQ ANEAVQDQLSALSFTS+AVIFGAGLVTSLSPCTLSVLPLT
Sbjct: 94   LADGGIGDWLGRLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLT 153

Query: 903  LGYIGASGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGKAYGQIGQGLPIAASGVA 724
            LGYIGA GSGKSRAEV+ +S+AF+             ASFAGKAYGQIGQGLP+AASG+A
Sbjct: 154  LGYIGAFGSGKSRAEVVADSIAFALGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLA 213

Query: 723  VVMGLNLLEVIELQLPSFFNNVDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL 544
            V+MGLNLLE+IELQLPSFFNN DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL
Sbjct: 214  VIMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL 273

Query: 543  GYVAASKDPIIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGALLLG 364
            GYVAASKDPI+G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP SGALLLG
Sbjct: 274  GYVAASKDPIVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLG 333

Query: 363  GGMYTLLDKLFPMT 322
            GG+YT LD+LFP++
Sbjct: 334  GGVYTFLDRLFPVS 347


>gb|AAO16018.1| chloroplast biogenesis protein [Lotus japonicus]
          Length = 345

 Score =  426 bits (1096), Expect = e-117
 Identities = 232/335 (69%), Positives = 263/335 (78%)
 Frame = -2

Query: 1314 RHKHHQRSINVHMKMLKKSSTEDLGRDILTSSEANGNKDFLVKGLVNAIAVANIVPIDTA 1135
            RH  H   INVH K  +  +       + +  ++NGN    ++  + A+  AN+V    A
Sbjct: 27   RHGRHVVPINVHKKASEPENC------LQSDWKSNGNN---IRTFIGAMTAANLVAPIAA 77

Query: 1134 NALTMENVMERAASLAAMADINLGDSFGGFLYSSGQSANEAVQDQLSALSFTSIAVIFGA 955
             A       E AAS   +AD ++ D FGG LYS+GQ ANEAV DQLS+LSFTS+AVIFGA
Sbjct: 78   KA-------EVAASFYDLADGSINDWFGGILYSAGQQANEAVLDQLSSLSFTSLAVIFGA 130

Query: 954  GLVTSLSPCTLSVLPLTLGYIGASGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGK 775
            GLVTSLSPCTLSVLPLTLGYIGA GSGKSRAEVIG+S+AFS             ASFAGK
Sbjct: 131  GLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVAASFAGK 190

Query: 774  AYGQIGQGLPIAASGVAVVMGLNLLEVIELQLPSFFNNVDPRAAAANFPSSVQAYLAGLT 595
            AYGQIGQGLP+AASG+AV+MGLNLLE+IELQLPSFF++ DPR+ AAN PSSVQAYLAGLT
Sbjct: 191  AYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDSFDPRSVAANLPSSVQAYLAGLT 250

Query: 594  FALAASPCSTPVLATLLGYVAASKDPIIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSF 415
            FALAASPCSTPVLATLLGYVAASKDP+IG SLLLTYTTGY+APLLLAASFAGALQSLLSF
Sbjct: 251  FALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYIAPLLLAASFAGALQSLLSF 310

Query: 414  RKFSAWINPTSGALLLGGGMYTLLDKLFPMTTMAM 310
            RK+SAWINP SGA+LLGGG+YT LDKLFP TTMAM
Sbjct: 311  RKYSAWINPISGAMLLGGGVYTFLDKLFPATTMAM 345


>ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|222871779|gb|EEF08910.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  426 bits (1094), Expect = e-116
 Identities = 222/266 (83%), Positives = 239/266 (89%)
 Frame = -2

Query: 1107 ERAASLAAMADINLGDSFGGFLYSSGQSANEAVQDQLSALSFTSIAVIFGAGLVTSLSPC 928
            E AAS+  +AD ++GD FGGFLYSSGQ ANEAVQDQLSALSFTS+AVIFGAGLVTSLSPC
Sbjct: 1    EEAASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 60

Query: 927  TLSVLPLTLGYIGASGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGKAYGQIGQGL 748
            TLSVLPLTLGYIGA GSGKSRAE++G+S+AF+             ASFAGK YGQIGQGL
Sbjct: 61   TLSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGL 120

Query: 747  PIAASGVAVVMGLNLLEVIELQLPSFFNNVDPRAAAANFPSSVQAYLAGLTFALAASPCS 568
            P+AASG+AV+MGLNLLEVIELQLPSFFNN DPRAAAANFPSSVQAYLAGLTFALAASPCS
Sbjct: 121  PLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 180

Query: 567  TPVLATLLGYVAASKDPIIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 388
            TPVLATLLGYVAASKDP++G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP
Sbjct: 181  TPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 240

Query: 387  TSGALLLGGGMYTLLDKLFPMTTMAM 310
             SGALLLGGG+YT LD+LFP  TMAM
Sbjct: 241  MSGALLLGGGVYTFLDRLFP-PTMAM 265