BLASTX nr result

ID: Cimicifuga21_contig00001079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001079
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-li...   316   4e-84
ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...   315   7e-84
emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]   313   3e-83
ref|XP_002283077.1| PREDICTED: flotillin-like protein 1 [Vitis v...   311   1e-82
ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|2...   310   2e-82

>ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein 4-like
           [Cucumis sativus] gi|449493412|ref|XP_004159281.1|
           PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein
           4-like [Cucumis sativus]
          Length = 841

 Score =  316 bits (810), Expect = 4e-84
 Identities = 166/249 (66%), Positives = 189/249 (75%), Gaps = 1/249 (0%)
 Frame = -1

Query: 929 FENKRXXXXXXXXXXXAMKKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEK 750
           FEN+R           A KKA WT+ AQ+A VEA KAVA+REA+LQ++VEMMNA+T TEK
Sbjct: 234 FENEREAEVAEANAELAKKKAAWTRAAQVAEVEAAKAVALREAQLQKEVEMMNAMTMTEK 293

Query: 749 LKAEFLSKASVEYETKVQEANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSA 570
           LKAEFLSKASVEYETKVQEANW                      Q+ALA A FY +QQ A
Sbjct: 294 LKAEFLSKASVEYETKVQEANWELYDKQKKAEAVLFEKEREAEAQKALADAGFYARQQVA 353

Query: 569 DGELYAKKKEAEGLVALAQAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA 390
           DGELYAKKKEAEGLVALA+A+  Y+ +LLEALGGNYSALRDYLMINGG+FQE+A+INA A
Sbjct: 354 DGELYAKKKEAEGLVALAEAQALYLRSLLEALGGNYSALRDYLMINGGLFQEVAKINADA 413

Query: 389 VQGLQPKISIWNNGGSGQGLD-GMGNGSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAWM 213
           ++GLQPKIS+W NG  GQGL+ G G GS A+KEV GVYKMLPPLF TVHEQTGMLPP WM
Sbjct: 414 IKGLQPKISVWTNGSGGQGLEGGSGAGSIAMKEVAGVYKMLPPLFQTVHEQTGMLPPPWM 473

Query: 212 GTLTGSSTN 186
           G+L  SS N
Sbjct: 474 GSLGDSSQN 482



 Score =  239 bits (610), Expect = 7e-61
 Identities = 133/232 (57%), Positives = 162/232 (69%), Gaps = 2/232 (0%)
 Frame = -1

Query: 875  KKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEKLKAEFLSKASVEYETKVQ 696
            KKA   + +++A VEA KAV++REA+ +++VE MNALT TEKLKAE LSKAS+EYETK Q
Sbjct: 612  KKAILAKGSEMAEVEAAKAVSLREADQKKKVEKMNALTMTEKLKAELLSKASIEYETKAQ 671

Query: 695  EANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSADGELYAKKKEAEGLVALA 516
            EAN                       Q+ALA A FY  QQ+AD +LYAKKKEAEGLVA  
Sbjct: 672  EANCEFYXKQIKAEAELFQKQXNAEAQKALADAKFYACQQTADRDLYAKKKEAEGLVAXG 731

Query: 515  QAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA--VQGLQPKISIWNNGGS 342
               G    +LL+ALGGNY+ALRDYLMINGG+FQ++A INA A  ++ LQP IS+W NG  
Sbjct: 732  TGTGLSTVSLLDALGGNYTALRDYLMINGGMFQDIANINANAIKIKRLQPMISVWTNGRD 791

Query: 341  GQGLDGMGNGSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAWMGTLTGSSTN 186
            GQGL G GN   A+KE+ GV++MLPPLF T HEQT +LPP WM T+T    N
Sbjct: 792  GQGLGGAGN--MAMKELSGVHQMLPPLFQTDHEQTRLLPPPWMVTMTDPKQN 841


>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  315 bits (808), Expect = 7e-84
 Identities = 166/246 (67%), Positives = 188/246 (76%)
 Frame = -1

Query: 929 FENKRXXXXXXXXXXXAMKKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEK 750
           +EN R           A KKAGW+++AQ+A VEA KAV++REAELQR+VE MNALTRTEK
Sbjct: 234 YENHREAEVAEANADLAKKKAGWSKEAQVAEVEATKAVSLREAELQREVERMNALTRTEK 293

Query: 749 LKAEFLSKASVEYETKVQEANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSA 570
           LKAEFLS+ASVEYETKVQEANW                      Q+A A ATFY +QQ A
Sbjct: 294 LKAEFLSQASVEYETKVQEANWELYTKQKAAEAILYEKQKEADAQKATADATFYARQQVA 353

Query: 569 DGELYAKKKEAEGLVALAQAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA 390
           DGELY+K+KEAEGLVALAQA+G YI TLL+ALGGNY+ALRDYLMIN G+FQE+ARINA A
Sbjct: 354 DGELYSKQKEAEGLVALAQAQGVYIRTLLDALGGNYAALRDYLMINSGMFQEIARINADA 413

Query: 389 VQGLQPKISIWNNGGSGQGLDGMGNGSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAWMG 210
           V GLQPKISIW NG SG+  DG G G +A+KEV GVYKMLPPLF TV +QTGMLPPAWMG
Sbjct: 414 VHGLQPKISIWTNGNSGEANDGTG-GGNAMKEVAGVYKMLPPLFKTVQDQTGMLPPAWMG 472

Query: 209 TLTGSS 192
           TLT SS
Sbjct: 473 TLTDSS 478


>emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]
          Length = 488

 Score =  313 bits (803), Expect = 3e-83
 Identities = 164/248 (66%), Positives = 194/248 (78%), Gaps = 2/248 (0%)
 Frame = -1

Query: 929 FENKRXXXXXXXXXXXAMKKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEK 750
           +EN+R           A KKA WT++AQ+A VEA KAVA+REAELQR+VE MNALTRTEK
Sbjct: 234 YENQREAEVAEVNSVLAKKKAVWTKEAQVAEVEAAKAVALREAELQREVERMNALTRTEK 293

Query: 749 LKAEFLSKASVEYETKVQEANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSA 570
           LKAEFLSKASVEYETKVQEANW                      Q+A A A FY +QQ A
Sbjct: 294 LKAEFLSKASVEYETKVQEANWELYKKQKXAEAVLYEKEKEAAAQKASAEAAFYARQQLA 353

Query: 569 DGELYAKKKEAEGLVALAQAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA 390
           DGELYAKKKEAEG+VALAQA+G Y+ TLL+ALGGNY+ALRDY+M++GG FQE+A+INA A
Sbjct: 354 DGELYAKKKEAEGIVALAQAQGVYLRTLLDALGGNYAALRDYMMVSGGTFQEIAKINAEA 413

Query: 389 VQGLQPKISIWNNGGSG-QGLDGMGN-GSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAW 216
           V+GLQPKI++W NGG G + LDG G+ GS+A+KE+ GVYKMLPPLF+TVHEQTGMLPP+W
Sbjct: 414 VRGLQPKITVWTNGGGGAEALDGGGSGGSTAMKEISGVYKMLPPLFSTVHEQTGMLPPSW 473

Query: 215 MGTLTGSS 192
           MGTLT S+
Sbjct: 474 MGTLTHSA 481


>ref|XP_002283077.1| PREDICTED: flotillin-like protein 1 [Vitis vinifera]
          Length = 488

 Score =  311 bits (797), Expect = 1e-82
 Identities = 162/248 (65%), Positives = 192/248 (77%), Gaps = 2/248 (0%)
 Frame = -1

Query: 929 FENKRXXXXXXXXXXXAMKKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEK 750
           +EN+R           A KKA WT++AQ+A VEA KAVA+REAELQ +VE MNALTRTEK
Sbjct: 234 YENQREAEVAEVNSVLAKKKAVWTKEAQVAEVEAAKAVALREAELQMEVERMNALTRTEK 293

Query: 749 LKAEFLSKASVEYETKVQEANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSA 570
           LKAEFLSKASVEYETKVQEANW                      Q+A A A FY +QQ A
Sbjct: 294 LKAEFLSKASVEYETKVQEANWELYKKQKAAEAVLYEKEKEAAAQKASAEAAFYARQQLA 353

Query: 569 DGELYAKKKEAEGLVALAQAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA 390
           DGELYAKKKEAEG+VALAQA+G Y+ TLL+ALGGNY+ALRDY+M++GG FQE+A+INA A
Sbjct: 354 DGELYAKKKEAEGIVALAQAQGVYLRTLLDALGGNYAALRDYMMVSGGTFQEIAKINAEA 413

Query: 389 VQGLQPKISIWNNGGSG-QGLDGMGN-GSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAW 216
           V+GLQPKI++W NGG G + LDG G+ GS+A+KE+ GVYKMLPPLF+TVHEQTGMLPP+W
Sbjct: 414 VRGLQPKITVWTNGGGGAEALDGGGSGGSTAMKEISGVYKMLPPLFSTVHEQTGMLPPSW 473

Query: 215 MGTLTGSS 192
           MGTLT S+
Sbjct: 474 MGTLTHSA 481


>ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|222855626|gb|EEE93173.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  310 bits (795), Expect = 2e-82
 Identities = 162/248 (65%), Positives = 190/248 (76%)
 Frame = -1

Query: 929 FENKRXXXXXXXXXXXAMKKAGWTQQAQLATVEAVKAVAIREAELQRQVEMMNALTRTEK 750
           +EN R           A KKAGW+ +AQ+A VEA KAV++R+AELQ +VE MNALTRTEK
Sbjct: 235 YENHREAEVAEANADLAKKKAGWSMEAQVAEVEATKAVSLRDAELQMEVERMNALTRTEK 294

Query: 749 LKAEFLSKASVEYETKVQEANWXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTQQQSA 570
           LKAEFLSKASVEYETKVQEANW                      Q+A+A ATFY++QQ A
Sbjct: 295 LKAEFLSKASVEYETKVQEANWELYRKQKAAEAILYEKEKEADAQKAIADATFYSRQQVA 354

Query: 569 DGELYAKKKEAEGLVALAQAKGAYIHTLLEALGGNYSALRDYLMINGGVFQELARINAGA 390
           DGELYAK+KEAEGLVALAQA+G Y+ TLL+ALGGNY+ALRDYLMIN G+++E+A+IN+ A
Sbjct: 355 DGELYAKQKEAEGLVALAQAQGVYLRTLLDALGGNYAALRDYLMINSGMYREIAKINSDA 414

Query: 389 VQGLQPKISIWNNGGSGQGLDGMGNGSSALKEVGGVYKMLPPLFNTVHEQTGMLPPAWMG 210
           VQGLQPKISIW NG SG+  DG G G +A+KEV GVYKMLPPLF TV EQTGMLPPAWMG
Sbjct: 415 VQGLQPKISIWTNGNSGETNDGAGAG-NAMKEVAGVYKMLPPLFQTVQEQTGMLPPAWMG 473

Query: 209 TLTGSSTN 186
           +LT SS +
Sbjct: 474 SLTDSSNS 481


Top