BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001065
         (3657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9...  1344   0.0  
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...  1230   0.0  
ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|2...  1229   0.0  
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9...  1183   0.0  
ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Me...  1158   0.0  

>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis vinifera]
          Length = 1041

 Score = 1344 bits (3479), Expect = 0.0
 Identities = 686/1039 (66%), Positives = 806/1039 (77%), Gaps = 7/1039 (0%)
 Frame = -1

Query: 3444 GSELDMVTSDLNI-LSRFKKRKISADMESPFNLVFSDFEASLPILRSSDYFMEPSLKELT 3268
            G   D  TS   I L ++K+RKIS    S    V  + EASLP LRSS Y+MEP LKEL 
Sbjct: 2    GMGCDAGTSGSQIALHQYKRRKISQKNVSSLCEVHGEVEASLPTLRSSGYYMEPCLKELA 61

Query: 3267 AWEDTDPGYCCRVDDFTVGRFGYGCVKFLGQTDVRGLNIDQIVKFDRHGIVVYEDEKDKP 3088
              E  D G+C RV DFTVGRFGYG VKFLG TDVR L++DQI++F RH +VVY DE  KP
Sbjct: 62   KRELMDSGFCSRVQDFTVGRFGYGRVKFLGDTDVRWLDLDQIIRFGRHEVVVYGDEGAKP 121

Query: 3087 VVGKGLNKVSIVTLILQLKSQSLEGKVLNSFVKKLRRTTERQGARFISFNPLNGEWKFLV 2908
             VG+GLNK + VTL+LQ++S S E   LN  V+KLR  T+RQGA FISFNP NGEWKFLV
Sbjct: 122  EVGQGLNKAAEVTLVLQIRSSSFEEGRLNDIVEKLRLCTKRQGADFISFNPSNGEWKFLV 181

Query: 2907 SHFSRFGLTXXXXXXXXXXXXXVLQLPGEMDDNGITEVDDEDLVHPAEADLSHSLPGHLK 2728
             HFSRFGL+             V+Q P E + + ++++D+  LV P  A LSHSLP HL 
Sbjct: 182  HHFSRFGLSEDDEEDIAMDDVTVVQHPLETNAHEVSDIDEATLVEPNGAVLSHSLPAHLG 241

Query: 2727 LDPIKMQEMRTLMFPXXXXXXXXXXXXXEK--QSFGKEPSRSSLQYSVLKTSHKNSPPAV 2554
            LDPIKM+EMR +MFP             ++  QSF KE  R  L YS  + SHK+     
Sbjct: 242  LDPIKMKEMRMVMFPVDEEEDHDFSGEFKQREQSFNKEYIRPPLHYSARRMSHKSGSSVA 301

Query: 2553 RRTPLALLGYNAPNYDPSPPGTILMTSQNKGMPLKITKVEGFKLDLKCDTPITGSHSSNV 2374
            R+TPLALL YN  + D S  GTILM  QNKGMPLK TKVEGFKLDLK +TPIT SHS N+
Sbjct: 302  RKTPLALLEYNPGSVDSSSSGTILMAQQNKGMPLKTTKVEGFKLDLKHETPITESHSHNI 361

Query: 2373 VDAALFMGRSFRVGWGPNGILVHTGTPVGKTDSWKGLSSVINMEKVALDKVVRDEDNNVK 2194
            VDAALFMGRSFRVGWGPNGILVH G  VG  DS + LSSVIN+EKVA+DKVVRDE+N V+
Sbjct: 362  VDAALFMGRSFRVGWGPNGILVHAGAAVGGNDSQRVLSSVINLEKVAIDKVVRDENNKVR 421

Query: 2193 EELIDLCFVSPLELHKSMNHDTTRVEVGSFNLTLQKLVSNRLTLPEICRNYIGIVERQLD 2014
            +EL+D CF+SPL+LHK + H+T  VE+GSF L LQ  VSNRL L EICR+YIGI+ERQL+
Sbjct: 422  KELVDSCFISPLKLHKDIKHETKEVEIGSFKLRLQNPVSNRLMLSEICRSYIGIIERQLE 481

Query: 2013 VTGLPLYARTRVMHQVMIWELIKVLFSDRDNRGHRKISVGE-EEEIMQDK-DSLPDIDLE 1840
            V  +   AR  +MHQVM+WELIKVLFS R+  G  K +  + EE++M D+ +   D+DLE
Sbjct: 482  VPEVSSSARVVLMHQVMVWELIKVLFSAREISGQSKSAGADNEEDMMHDRSEGSSDVDLE 541

Query: 1839 ALPLVRRAEFSYWLQESVCHRVQDEISCLNECSDLEHVFLLLTGRQLDAAVELAASRGDV 1660
            ALPL+RRAEFSYWLQESVCHRVQDE+S LNE SDLE + LLLTGRQLDAAVELAASRGDV
Sbjct: 542  ALPLIRRAEFSYWLQESVCHRVQDEVSSLNESSDLEQILLLLTGRQLDAAVELAASRGDV 601

Query: 1659 RLGCLLSQAGGSMENRSDVARQLDLWRINGLDFNFMEKDRLRLYELLAGNIQSALGDSVL 1480
            RL CLLSQAGGS  NR+DVA+QLDLWR NGLDFNF+EKDR+RL+ELLAGNI  AL    +
Sbjct: 602  RLACLLSQAGGSTINRADVAQQLDLWRTNGLDFNFIEKDRIRLFELLAGNIHGALHGKNI 661

Query: 1479 DWKRYLGLLMWYQLPPDASLPEIIHAYEQLLQEGGAPDPVPVYIDEGPLEEEVKWCVGDR 1300
            DWKR+LGLLMWYQLPPD SLP +   Y+QLL +GGAP PVPVYIDEGP+EE V W VG+R
Sbjct: 662  DWKRFLGLLMWYQLPPDTSLPFVFRNYQQLLVDGGAPHPVPVYIDEGPVEEAVSWSVGER 721

Query: 1299 FDLAYYLMLLHADEDTGRGVLKTMFSAFSSTHDALDYHMIWHQRAILEAIGTFSSNDLHV 1120
            +DLAYYLMLLHA E +  G+ KTMFSAFSSTHD LDYHMIWHQRA+LEA+G FSSNDLHV
Sbjct: 722  YDLAYYLMLLHASEGSEFGLGKTMFSAFSSTHDPLDYHMIWHQRAVLEAVGAFSSNDLHV 781

Query: 1119 LDMSLVSQLLCLGLCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSTQEIQRKFI 940
            LDM LVSQLLCLG CHWAIYVVL MP+RDDFP+LQA LIREILFQYCE W +QE+QR+F+
Sbjct: 782  LDMGLVSQLLCLGQCHWAIYVVLHMPFRDDFPYLQATLIREILFQYCESWHSQELQRQFM 841

Query: 939  EELGVPLAWMSEAMAVYYNYHGDLLKALEHFLESYNWQRAHSIFMTSVAHSLFLSAKHSE 760
            E+LG+PLAW+ EAMAVY+NY GDL +ALEH++   NWQ+AHS+FMTSVAHSLFLSAKHSE
Sbjct: 842  EDLGIPLAWLHEAMAVYFNYCGDLSRALEHYIACANWQKAHSLFMTSVAHSLFLSAKHSE 901

Query: 759  IWRLATSMEDHKSEIADWDLGAGIYISFYHLKGSMQEV-NSMTELEPLENRSAACREFFS 583
            IWRLATSMEDHKSEI  WDLGAG+YISFY ++ S+QE  N+M EL+ LE+++AAC++FFS
Sbjct: 902  IWRLATSMEDHKSEIEHWDLGAGVYISFYLIRSSLQEENNTMCELDSLESKNAACKDFFS 961

Query: 582  RLNESLDVWGSRLPVDARASYSKMAEEIC-CLLQSSGDGSSCDVRLNCYDTMGKAPLPED 406
             LNESL VWG RLPVDAR +YSKMAEEIC  LL  SG+GS+ DV+L+C+DT+  AP+PED
Sbjct: 962  CLNESLAVWGGRLPVDARVAYSKMAEEICGLLLSDSGEGSTRDVQLSCFDTVFSAPVPED 1021

Query: 405  LRSCHMQEAISHFTHFLTE 349
            L S H+Q A++ FT  L E
Sbjct: 1022 LHSSHLQNAVALFTCSLLE 1040


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|223533319|gb|EEF35071.1|
            nucleoporin, putative [Ricinus communis]
          Length = 1067

 Score = 1230 bits (3183), Expect = 0.0
 Identities = 622/1030 (60%), Positives = 777/1030 (75%), Gaps = 6/1030 (0%)
 Frame = -1

Query: 3411 NILSRFKKRKISADMESPFNLVFSDFEASLPILRSSDYFMEPSLKELTAWEDTDPGYCCR 3232
            ++ +++KKR++S + +     +  + E SLP L S+DY+MEPSL +L A E  DPGYC R
Sbjct: 39   SLQTQYKKRRLSPNNDDVSCEISREIECSLPTLCSTDYYMEPSLTDLVAHELIDPGYCSR 98

Query: 3231 VDDFTVGRFGYGCVKFLGQTDVRGLNIDQIVKFDRHGIVVYEDEKDKPVVGKGLNKVSIV 3052
            V DF VGR G+GCVKFLG TD+R L++D+IVKF RH IVVYED+ DKP VG+GLNK + V
Sbjct: 99   VPDFIVGRLGFGCVKFLGTTDLRWLDLDKIVKFRRHEIVVYEDDSDKPQVGQGLNKTAEV 158

Query: 3051 TLILQLKSQSLEGKVLNSFVKKLRRTTERQGARFISFNPLNGEWKFLVSHFSRFGLTXXX 2872
            TL LQ++   L  + LN+ VKKL+ +  RQGA FISF+P NG+WKFLV+HFSRFGL+   
Sbjct: 159  TLNLQIRLSDLNKRQLNNAVKKLKESAARQGAYFISFHPENGQWKFLVNHFSRFGLSDDE 218

Query: 2871 XXXXXXXXXXVLQLPGEMDDNGITEVDDEDLVHPAEADLSHSLPGHLKLDPIKMQEMRTL 2692
                       ++ P EM     T  + +  + P    L HSLP HL LDP+KM+EMR L
Sbjct: 219  EEDIAMDDVVAVEEPIEMGGTPETNEETQVELDPTGPMLYHSLPAHLGLDPVKMKEMRML 278

Query: 2691 MFPXXXXXXXXXXXXXEKQ--SFGKEPSRSSLQYSVLKTSHKNSPPAVRRTPLALLGYNA 2518
            MFP              +Q  S GKE  + SL  S  K S +++ P +R+ PLALL Y  
Sbjct: 279  MFPVEEEEEVEHFNGPSRQKLSSGKEHIKHSLHNSSQKISQRSNTPVMRKMPLALLDYRP 338

Query: 2517 PNYDPSPPGTILMTSQNKGMPLKITKVEGFKLDLKCDTPITGSHSSNVVDAALFMGRSFR 2338
             +++ S PG ILM  QNKG+PLK  K EGFKL+L+ +TP+TGS+S N+VDA LFMGRSFR
Sbjct: 339  SSFNSSSPGAILMAQQNKGLPLKTVKGEGFKLNLEHETPMTGSYSRNIVDAGLFMGRSFR 398

Query: 2337 VGWGPNGILVHTGTPVGKTDSWKGLSSVINMEKVALDKVVRDEDNNVKEELIDLCFVSPL 2158
            VGWGPNG+LVH+G PVG   + + LSSVIN+EKVA D+VVRDEDN   ++L++  F  PL
Sbjct: 399  VGWGPNGVLVHSGAPVGCNGTQRLLSSVINVEKVAFDRVVRDEDNKASKDLVEFAFDCPL 458

Query: 2157 ELHKSMNHDTTRVEVGSFNLTLQKLVSNRLTLPEICRNYIGIVERQLDVTGLPLYARTRV 1978
             LHK++NH+T  VEVGSF L LQK+VSNR  L EICR+YI I+ERQL+V  L   AR  +
Sbjct: 459  NLHKTINHETKEVEVGSFKLKLQKVVSNRKMLSEICRSYIDIIERQLEVPRLSSPARLVL 518

Query: 1977 MHQVMIWELIKVLFSDRDNRGHRK-ISVGEEEEIMQD-KDSLPDIDLEALPLVRRAEFSY 1804
            MHQVM+WELIKVLFS+R+N G  K +    EE++MQD K+   +ID E+LPL+RRAEFS 
Sbjct: 519  MHQVMVWELIKVLFSERENSGQSKSMGADNEEDMMQDIKEGSLEIDQESLPLIRRAEFSC 578

Query: 1803 WLQESVCHRVQDEISCLNECSDLEHVFLLLTGRQLDAAVELAASRGDVRLGCLLSQAGGS 1624
            WLQESVCHRVQ+E+S L+E S LEH+ LL+TGRQLD AVE+A SRGDVRL CLL QAGGS
Sbjct: 579  WLQESVCHRVQEEVSSLSESSYLEHILLLMTGRQLDGAVEIAVSRGDVRLACLLGQAGGS 638

Query: 1623 MENRSDVARQLDLWRINGLDFNFMEKDRLRLYELLAGNIQSALGDSVLDWKRYLGLLMWY 1444
            M NR+DVARQLDLWR NGLDFNF+EK+R+RLYEL++GNI +AL    +DWKR+LGLLMWY
Sbjct: 639  MVNRTDVARQLDLWRNNGLDFNFIEKERIRLYELVSGNIHNALDGVKIDWKRFLGLLMWY 698

Query: 1443 QLPPDASLPEIIHAYEQLLQEGGAPDPVPVYIDEGPLEEEVKWCVGDRFDLAYYLMLLHA 1264
            +L P  SLP I   Y+ LL +G AP P+P+YIDEGP EE V +  G  FDL+YYLMLLHA
Sbjct: 699  RLAPQTSLPIIFQTYQHLLNDGKAPYPLPIYIDEGPAEEAVNFS-GRHFDLSYYLMLLHA 757

Query: 1263 DEDTGRGVLKTMFSAFSSTHDALDYHMIWHQRAILEAIGTFSSNDLHVLDMSLVSQLLCL 1084
              D   G LKTMFSAFSST+D LDYHMIWHQRAILEA+G  +SN+L VLD+ LVSQLLC+
Sbjct: 758  KGDGEIGYLKTMFSAFSSTNDPLDYHMIWHQRAILEAVGILTSNNLQVLDIGLVSQLLCI 817

Query: 1083 GLCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSTQEIQRKFIEELGVPLAWMSE 904
            G CHWAIYVVL MPYRDD+P+LQA +IREILFQYCE WS  E QR+FIE L +P AW+ E
Sbjct: 818  GQCHWAIYVVLHMPYRDDYPYLQATVIREILFQYCEIWSLDESQRQFIENLDIPRAWLHE 877

Query: 903  AMAVYYNYHGDLLKALEHFLESYNWQRAHSIFMTSVAHSLFLSAKHSEIWRLATSMEDHK 724
            AMAV +NYHG+LLKALEH+LE  NWQ+AHSIF+TSVAH+LFLSA HSEIWRL TSMEDHK
Sbjct: 878  AMAVNFNYHGNLLKALEHYLECENWQKAHSIFITSVAHTLFLSANHSEIWRLTTSMEDHK 937

Query: 723  SEIADWDLGAGIYISFYHLKGSMQE-VNSMTELEPLENRSAACREFFSRLNESLDVWGSR 547
            SE+ +WDLGAGIY+SFY ++ S QE  N+ +EL+  E++++ACR+F S LNESL+V+G R
Sbjct: 938  SELENWDLGAGIYLSFYLIRSSFQEGYNNTSELDSFESKNSACRDFLSHLNESLEVFGDR 997

Query: 546  LPVDARASYSKMAEEIC-CLLQSSGDGSSCDVRLNCYDTMGKAPLPEDLRSCHMQEAISH 370
            LPVDAR +YSKMAEEI   LL  +G+GS+ D +L+C+DT+  AP+PEDLRS ++Q+A+S 
Sbjct: 998  LPVDARVAYSKMAEEISEMLLHYAGEGSTRDAQLSCFDTIFGAPVPEDLRSNYLQDAVSL 1057

Query: 369  FTHFLTETAS 340
            FT +L+E A+
Sbjct: 1058 FTCYLSEMAA 1067


>ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|222841268|gb|EEE78815.1|
            predicted protein [Populus trichocarpa]
          Length = 1067

 Score = 1229 bits (3181), Expect = 0.0
 Identities = 641/1069 (59%), Positives = 789/1069 (73%), Gaps = 9/1069 (0%)
 Frame = -1

Query: 3519 ALIAIRGISEGTNCMRSNLFPDTSQGSELDMVTSDLNILSRFKKRKISADMESPFNLVFS 3340
            +L+ + G S     +RSNL   TS   ELD     LN   ++KKR+ S   E P    F 
Sbjct: 5    SLLPVAGSSNEIPSIRSNLSFGTS--CELDFEVETLNSEGQYKKRRTSLKSE-PRCEDFR 61

Query: 3339 DFEASLPILRSSDYFMEPSLKELTAWEDTDPGYCCRVDDFTVGRFGYGCVKFLGQTDVRG 3160
              EA LP LRS DY+MEP L +L A E  DPGYC RV DFTVGRFGYG VKFLG+TDVR 
Sbjct: 62   MVEALLPTLRSVDYYMEPCLMDLAAGEVVDPGYCSRVLDFTVGRFGYGRVKFLGKTDVRR 121

Query: 3159 LNIDQIVKFDRHGIVVYEDEKDKPVVGKGLNKVSIVTLILQLKSQSLEGKVLNSFVKKLR 2980
            LN+DQIVKF+RH ++VYEDE  KP+VG+GLNK + V+L L+LK        +N  V+KLR
Sbjct: 122  LNLDQIVKFNRHEVIVYEDENAKPMVGQGLNKPAEVSLTLKLKLLDFNKGRINDVVEKLR 181

Query: 2979 RTTERQGARFISFNPLNGEWKFLVSHFSRFGLTXXXXXXXXXXXXXVLQLPGEMDDNGIT 2800
             + ERQGA FISF+P+ GEWKFLV HFSRFGL+              +Q P EM    I 
Sbjct: 182  ESMERQGAEFISFDPVIGEWKFLVCHFSRFGLSGDDEEDITMDDAAEVQDPAEMKGGEIV 241

Query: 2799 EVDDE--DLVHPAEADLSHSLPGHLKLDPIKMQEMRTLMFPXXXXXXXXXXXXXEKQ-SF 2629
            ++D+E  + V   E  L HSLP HL LDP++M EMRT MFP              ++  +
Sbjct: 242  DMDEETPEEVEANEPVLYHSLPAHLGLDPVRMNEMRTWMFPDDEEEVVEDLIGLRQKFPY 301

Query: 2628 GKEPSRSSLQYSVLKTSHKNSPPAVRRTPLALLGYNAPNYDPSPPGTILMTSQNKGMPLK 2449
             KE   S LQ S  + SH+ S P +R+TPLALL Y   ++D S PGTIL+  Q+KG+  K
Sbjct: 302  NKESIGSPLQNSTQRMSHRASSPVMRKTPLALLEYKPGSFDSSSPGTILLAQQHKGLTSK 361

Query: 2448 ITKVEGFKLDLKCDTPITGSHSSNVVDAALFMGRSFRVGWGPNGILVHTGTPVGKTDSWK 2269
            + K  GF L+L+ +TPI+GSHS NVVDA LFMGRSFRVGWGPNG+LVH+G PVG  +S +
Sbjct: 362  MMKGVGFTLNLEHETPISGSHSCNVVDAGLFMGRSFRVGWGPNGVLVHSGAPVGGNNSQR 421

Query: 2268 GLSSVINMEKVALDKVVRDEDNNVKEELIDLCFVSPLELHKSMNHDTTRVEVGSFNLTLQ 2089
             LSS+I++EKVALDKVVRDE+N  ++EL+D  F SPL LHK++N +T  VE+GSF L LQ
Sbjct: 422  FLSSIIHVEKVALDKVVRDENNKSRKELVDFSFDSPLNLHKAINRETKEVEIGSFKLKLQ 481

Query: 2088 KLVSNRLTLPEICRNYIGIVERQLDVTGLPLYARTRVMHQVMIWELIKVLFSDRDNRGHR 1909
            K+VSNRL L EICR+YI IVERQL+V  L   AR  +MHQVMIWELIKVLFS+R+N G  
Sbjct: 482  KVVSNRLMLSEICRSYIDIVERQLEVPWLSSSARLVLMHQVMIWELIKVLFSERENSGQS 541

Query: 1908 K-ISVGEEEEIMQD-KDSLPDIDLEALPLVRRAEFSYWLQESVCHRVQDEISCLNECSDL 1735
            K +    EE++MQD K+S  ++D EALPL+RRAEFS WLQESVCHRVQDE+S LNE S L
Sbjct: 542  KSVGADNEEDMMQDLKESSLEVDQEALPLIRRAEFSCWLQESVCHRVQDEVSSLNESSYL 601

Query: 1734 EHVFLLLTGRQLDAAVELAASRGDVRLGCLLSQAGGSMENRSDVARQLDLWRINGLDFNF 1555
            EH+FLLLTGRQLDAAVE+AASRGDVRL CLLSQAGG   N +D+ARQLDLWR NGLDFNF
Sbjct: 602  EHIFLLLTGRQLDAAVEMAASRGDVRLACLLSQAGGL--NHADIARQLDLWRSNGLDFNF 659

Query: 1554 MEKDRLRLYELLAGNIQSALGDSVLDWKRYLGLLMWYQLPPDASLPEIIHAYEQLLQEGG 1375
            +EK+R+RLYELL+GNI  AL D  +DWKR+LGLLMWYQ+PP   LP I   Y+ L   G 
Sbjct: 660  IEKERVRLYELLSGNIHGALHDLKIDWKRFLGLLMWYQMPPHTPLPIIFQTYQLLFVNGK 719

Query: 1374 APDPVPVYIDEGPLEEEVKWCVGDRFDLAYYLMLLHADEDTGRGVLKTMFSAFSSTHDAL 1195
            AP P+P+YIDEGP++ +V +     FDL+YYLMLLHA+ +     LKTM SAFSSTHD L
Sbjct: 720  APYPLPIYIDEGPVDADVHFSE-KHFDLSYYLMLLHANGEGEFSALKTMLSAFSSTHDPL 778

Query: 1194 DYHMIWHQRAILEAIGTFSSNDLHVLDMSLVSQLLCLGLCHWAIYVVLQMPYRDDFPFLQ 1015
            DYHMIWHQRA+LEA+G F+S DL VLDM LVSQLLC+G CHWAIYVVL MP  DD+P+L 
Sbjct: 779  DYHMIWHQRAVLEAVGIFTSKDLQVLDMGLVSQLLCIGQCHWAIYVVLHMPQCDDYPYLH 838

Query: 1014 ANLIREILFQYCEFWSTQEIQRKFIEELGVPLAWMSEAMAVYYNYHGDLLKALEHFLESY 835
            A +IREILFQYCE W + E Q++FIE L +PL+W+ EAMAVY++YHGDL KALEH+LE  
Sbjct: 839  ATVIREILFQYCETWCSDESQQRFIENLDIPLSWLHEAMAVYFSYHGDLSKALEHYLECA 898

Query: 834  NWQRAHSIFMTSVAHSLFLSAKHSEIWRLATSMEDHKSEIADWDLGAGIYISFYHLKGSM 655
            NWQ+AHSIF+TSVAH LFLSA HSEIWRLA +MEDHKSEIA+WDLGAGIYISFY +K S 
Sbjct: 899  NWQKAHSIFVTSVAHKLFLSADHSEIWRLAIAMEDHKSEIANWDLGAGIYISFYSIKNSF 958

Query: 654  Q-EVNSMTELEPLENRSAACREFFSRLNESLDVWGSRLPVDARASYSKMAEEICCLLQSS 478
            Q + ++M+EL+ +E++++ACR+F   L +SLDV   +LP+DAR +YSKMAEEI  LL S 
Sbjct: 959  QDDTSTMSELDSIESKNSACRDFLDHLKDSLDVLRDQLPMDARVAYSKMAEEISELLLSD 1018

Query: 477  GD---GSSCDVRLNCYDTMGKAPLPEDLRSCHMQEAISHFTHFLTETAS 340
             D   GS+ D +L+C+DT+ +AP+PEDLRS H+Q+A+S FT +L+E A+
Sbjct: 1019 PDIREGSTRDAQLSCFDTVLRAPIPEDLRSNHLQDAVSLFTCYLSEMAA 1067


>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Glycine
            max]
          Length = 1022

 Score = 1183 bits (3060), Expect = 0.0
 Identities = 600/1032 (58%), Positives = 756/1032 (73%), Gaps = 5/1032 (0%)
 Frame = -1

Query: 3420 SDLNILSRFKKRKISADMESPFNLVFSDFEASLPILRSSDYFMEPSLKELTAWEDTDPGY 3241
            SD  IL   K+R++      P   + ++ EASLPIL SS Y+ +PSLKEL A E  +PGY
Sbjct: 9    SDSCILHTCKRRRVYKGCFHPSIDIMTETEASLPILNSSGYYTKPSLKELVARELVEPGY 68

Query: 3240 CCRVDDFTVGRFGYGCVKFLGQTDVRGLNIDQIVKFDRHGIVVYEDEKDKPVVGKGLNKV 3061
            C RV DFTVGRFGYG V++L +TDVRGL ID+IVKF RH IVVY DE DKP VG+GLNK 
Sbjct: 69   CSRVPDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFHRHEIVVYSDENDKPAVGQGLNKA 128

Query: 3060 SIVTLILQLKS-QSLEGKVLNSFVKKLRRTTERQGARFISFNPLNGEWKFLVSHFSRFGL 2884
            + V L+L  +  +S EGK  +  V KL++ T+RQ A+FISF+ + GEWKFLV HFSRFG 
Sbjct: 129  AEVVLVLDSEILKSKEGKE-DVMVSKLKQITKRQKAQFISFDLVTGEWKFLVGHFSRFGF 187

Query: 2883 TXXXXXXXXXXXXXVLQLPGEMDDNGITEVDDEDLVHPAEADLSHSLPGHLKLDPIKMQE 2704
                                 MDD  + +V+ E   +  E +LSHSLP HL+LDP+KM+E
Sbjct: 188  GDDDEEDIA------------MDDAEVYDVEKESPSNTNELELSHSLPSHLRLDPVKMRE 235

Query: 2703 MRTLMFPXXXXXXXXXXXXXEKQSFGKEPSRSSLQYSVLKTSHKNSPPAVRRTPLALLGY 2524
            MR LMFP              K S GK+  R  LQ S    +H+++PP  R+TP  LL Y
Sbjct: 236  MRLLMFPDEEEVEDLSC----KSSSGKQYVRP-LQSSAQAINHRSTPPVARKTPFPLLEY 290

Query: 2523 NAPNYDPSPPGTILMTSQNKGMPLKITKVEGFKLDLKCDTPITGSHSSNVVDAALFMGRS 2344
               N+D + PG ILM  Q+KGMPL+  K +GFKLDLK +TP++G+++ N+VDA LFMG+S
Sbjct: 291  KHGNFDSNSPGGILMVQQHKGMPLRTIKSQGFKLDLKHETPVSGNYAHNIVDAGLFMGKS 350

Query: 2343 FRVGWGPNGILVHTGTPVGKTDSWKGLSSVINMEKVALDKVVRDEDNNVKEELIDLCFVS 2164
            FRVGWGPNGILVH+G PVG + + K LSSV+N+EKVA D VVRDE+  V EELID   VS
Sbjct: 351  FRVGWGPNGILVHSGAPVGSSGNHKLLSSVVNLEKVAFDNVVRDENKKVTEELIDHALVS 410

Query: 2163 PLELHKSMNHDTTRVEVGSFNLTLQKLVSNRLTLPEICRNYIGIVERQLDVTGLPLYART 1984
            PL  HK +NH    VE+G   LTLQKL +NR TL EI  +Y  ++ERQL V GL    R 
Sbjct: 411  PLNFHKGINHVMKEVEIGPCKLTLQKLEANRSTLSEISHHYCDLIERQLSVPGLSSTTRL 470

Query: 1983 RVMHQVMIWELIKVLFSDRDNRGH-RKISVGEEEEIMQD-KDSLPDIDLEALPLVRRAEF 1810
             + HQVM WELI+VLFSDR+ +G    +    EE++MQD K+   D+D EALPL+RRAEF
Sbjct: 471  GLTHQVMTWELIRVLFSDREQKGQVESLGADNEEDMMQDIKEICQDVDREALPLMRRAEF 530

Query: 1809 SYWLQESVCHRVQDEISCLNECSDLEHVFLLLTGRQLDAAVELAASRGDVRLGCLLSQAG 1630
            SYWL+ESV + VQ++IS LN+   L+H+F+LLTGRQLD AV+LA S+GDVRL CLLSQAG
Sbjct: 531  SYWLRESVSYHVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAG 590

Query: 1629 GSMENRSDVARQLDLWRINGLDFNFMEKDRLRLYELLAGNIQSALGDSVLDWKRYLGLLM 1450
            GS  NRSD+ARQLD+WR  GLDF+F+EKDRLRLYELLAGNI  AL D  +DW+R+LGLLM
Sbjct: 591  GSTVNRSDIARQLDIWRNKGLDFSFIEKDRLRLYELLAGNIHDALHDVKIDWRRFLGLLM 650

Query: 1449 WYQLPPDASLPEIIHAYEQLLQEGGAPDPVPVYIDEGPLEEEVKWCVGDRFDLAYYLMLL 1270
            WY+LPP+ SLP     Y+  + EG AP PVP++IDEG  EE + W   + FD+++YLMLL
Sbjct: 651  WYKLPPNTSLPIAFQTYKHFVDEGTAPYPVPLFIDEGTSEEVISWNTDNHFDISFYLMLL 710

Query: 1269 HADEDTGRGVLKTMFSAFSSTHDALDYHMIWHQRAILEAIGTFSSNDLHVLDMSLVSQLL 1090
            HA+E+T    LK MFSAFSST D LDYHMIWHQRA+LEA+G  +SNDLH+LDMS VSQLL
Sbjct: 711  HANEETKFSFLKAMFSAFSSTPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLL 770

Query: 1089 CLGLCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSTQEIQRKFIEELGVPLAWM 910
            C+G CHWA+YVVL +P R+D+P+L  NLIREILFQYCE WS+ E Q++FIE+LG+P  WM
Sbjct: 771  CVGKCHWALYVVLHLPLREDYPYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWM 830

Query: 909  SEAMAVYYNYHGDLLKALEHFLESYNWQRAHSIFMTSVAHSLFLSAKHSEIWRLATSMED 730
             EA+A+YYNY+GD  KAL+ FL+  NWQ+AH+IF+TSVAH LFL AKH+EIWR+ATSMED
Sbjct: 831  HEALAIYYNYNGDHSKALDQFLQCANWQKAHAIFITSVAHRLFLQAKHAEIWRIATSMED 890

Query: 729  HKSEIADWDLGAGIYISFYHLKGSMQ-EVNSMTELEPLENRSAACREFFSRLNESLDVWG 553
            HKSEI +W+LGAGIYISFY ++ S+Q + N+MTEL+ LE+++AAC++F S+LNESL VWG
Sbjct: 891  HKSEIENWELGAGIYISFYLMRNSLQDDTNAMTELDSLESKNAACQDFVSQLNESLAVWG 950

Query: 552  SRLPVDARASYSKMAEEICCLLQSS-GDGSSCDVRLNCYDTMGKAPLPEDLRSCHMQEAI 376
             RLPVDAR  YS+MA EIC LL S  G+G++ D + NC+DT   AP+PED RS H+Q+A+
Sbjct: 951  CRLPVDARVVYSRMAGEICDLLLSGVGEGATRDEQFNCFDTAFSAPIPEDQRSGHLQDAV 1010

Query: 375  SHFTHFLTETAS 340
              FT +L+E A+
Sbjct: 1011 YLFTSYLSEIAT 1022


>ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Medicago truncatula]
            gi|355519337|gb|AET00961.1| Nuclear pore complex protein
            Nup98-Nup96 [Medicago truncatula]
          Length = 1022

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 592/1041 (56%), Positives = 750/1041 (72%), Gaps = 7/1041 (0%)
 Frame = -1

Query: 3441 SELDMVTSDLNILSRFKKRKISADMESPFNLVFSDFEASLPILRSSDYFMEPSLKELTAW 3262
            S++  V     +LS +KKR++S    +  N   +  EASLPIL S  Y+ EPSLK+L A 
Sbjct: 3    SDVGGVCDSSTVLS-YKKRRVSECYVTRSNKTMTKIEASLPILHSPGYYTEPSLKDLAAR 61

Query: 3261 EDTDPGYCCRVDDFTVGRFGYGCVKFLGQTDVRGLNIDQIVKFDRHGIVVYEDEKDKPVV 3082
            E   PGYC  V DFTVGRFGYG ++++ +TDVRGL +D IVKF ++ ++VYEDE +KPVV
Sbjct: 62   EVLYPGYCSSVPDFTVGRFGYGYIRYVNETDVRGLCLDDIVKFHKNEVIVYEDENNKPVV 121

Query: 3081 GKGLNKVSIVTLIL---QLKSQSLEGKVLNSFVKKLRRTTERQGARFISFNPLNGEWKFL 2911
            G+GLNK + V ++L   +LKS+     VL   VKKL+++TE QGARF+SF+ +  E K L
Sbjct: 122  GQGLNKAAEVVMVLNSRKLKSKECRNDVL---VKKLKQSTESQGARFVSFDLVTCELKIL 178

Query: 2910 VSHFSRFGLTXXXXXXXXXXXXXVLQLPGEMDDNGITEVDDEDLVHPAEADLSHSLPGHL 2731
            V HFSRFG                 +    MDD    +V+ E  ++  E +LSHSLP HL
Sbjct: 179  VEHFSRFGFDDDD------------EEDAVMDDAETHDVEKELPINVDEIELSHSLPAHL 226

Query: 2730 KLDPIKMQEMRTLMFPXXXXXXXXXXXXXEKQSFGKEPSRSSLQYSVLKTSHKNSPPAVR 2551
            +LDP+KM+EMR+LMFP              K SFGKE  R  L+ S     ++++PP VR
Sbjct: 227  RLDPVKMREMRSLMFPDEEEMEDLGR----KSSFGKESVRP-LKNSAQSAMNRSTPPTVR 281

Query: 2550 RTPLALLGYNAPNYDPSPPGTILMTSQNKGMPLKITKVEGFKLDLKCDTPITGSHSSNVV 2371
             TP  LL Y   N + + PG+ILM  Q+K MPL+  K +GFKLDLK +TPI+GS++ N+V
Sbjct: 282  NTPFPLLEYKHGNLESNSPGSILMVQQHKNMPLRAVKAQGFKLDLKQETPISGSYAHNIV 341

Query: 2370 DAALFMGRSFRVGWGPNGILVHTGTPVGKTDSWKGLSSVINMEKVALDKVVRDEDNNVKE 2191
            DA LFMG+SFRVGWGPNGILVH+GT VG     K +SSV+N+EKVA D +VRDE+  V E
Sbjct: 342  DAGLFMGKSFRVGWGPNGILVHSGTLVGSGGDHKLMSSVVNLEKVAFDNLVRDENKKVCE 401

Query: 2190 ELIDLCFVSPLELHKSMNHDTTRVEVGSFNLTLQKLVSNRLTLPEICRNYIGIVERQLDV 2011
            EL+D   VSPL  HK +NH T  V+VG + LTLQKL +NR  LPEI   Y  I+ERQ+ V
Sbjct: 402  ELVDHALVSPLNFHKGINHVTKEVDVGPYKLTLQKLEANRTDLPEISHQYCDIIERQMSV 461

Query: 2010 TGLPLYARTRVMHQVMIWELIKVLFSDRDNRGH-RKISVGEEEEIMQD-KDSLPDIDLEA 1837
             GLP + R  + HQVM WELI+VLFS+R  +G    +    EE++M+D K+   D+D EA
Sbjct: 462  PGLPSWNRLGLTHQVMTWELIRVLFSERKQKGQIESLGADNEEDMMEDIKEVDNDVDQEA 521

Query: 1836 LPLVRRAEFSYWLQESVCHRVQDEISCLNECSDLEHVFLLLTGRQLDAAVELAASRGDVR 1657
            LPL+RRAEFSYW++ESV + VQ++IS LN+   L+HVF LLTGRQLD AV+LA S GDVR
Sbjct: 522  LPLIRRAEFSYWMRESVSYHVQNQISSLNDSHYLQHVFTLLTGRQLDEAVQLAVSNGDVR 581

Query: 1656 LGCLLSQAGGSMENRSDVARQLDLWRINGLDFNFMEKDRLRLYELLAGNIQSALGDSVLD 1477
            L CLLSQAGGS  NRSD+A+QLD+WR  GLDFNF+E+DRLRLYELLAGNI  AL D  +D
Sbjct: 582  LACLLSQAGGSTLNRSDIAKQLDIWRNKGLDFNFIEEDRLRLYELLAGNIHDALHDIQID 641

Query: 1476 WKRYLGLLMWYQLPPDASLPEIIHAYEQLLQEGGAPDPVPVYIDEGPLEEEVKWCVGDRF 1297
            W+R+LGLLMWYQLPPD SLP     Y+  L EG AP PVP+YIDEG  EE V       F
Sbjct: 642  WRRFLGLLMWYQLPPDTSLPAAFETYKHFLDEGTAPYPVPLYIDEGTSEEVVSLKADKHF 701

Query: 1296 DLAYYLMLLHADEDTGRGVLKTMFSAFSSTHDALDYHMIWHQRAILEAIGTFSSNDLHVL 1117
            D+++YLMLLHA EDT    LK MFSAFSST D LDYHMIWHQR +LEA+G  +SNDLH+L
Sbjct: 702  DISFYLMLLHAKEDTEFSFLKAMFSAFSSTPDPLDYHMIWHQREVLEAVGVINSNDLHIL 761

Query: 1116 DMSLVSQLLCLGLCHWAIYVVLQMPYRDDFPFLQANLIREILFQYCEFWSTQEIQRKFIE 937
            DM  VSQLLCLG CHWAIYV L +P+R+D+PFL  NLIREILFQYCE WS+ E Q  FI 
Sbjct: 762  DMGFVSQLLCLGKCHWAIYVALHLPHREDYPFLHVNLIREILFQYCETWSSDESQYHFIV 821

Query: 936  ELGVPLAWMSEAMAVYYNYHGDLLKALEHFLESYNWQRAHSIFMTSVAHSLFLSAKHSEI 757
            +LG+P  WM EA+A+YYNY+GDL +ALE +L+  NWQ+AH+IF+TSVAH LFL AKHSEI
Sbjct: 822  DLGIPKEWMHEALAIYYNYNGDLAEALEQYLQCANWQKAHTIFVTSVAHKLFLQAKHSEI 881

Query: 756  WRLATSMEDHKSEIADWDLGAGIYISFYHLKGSMQ-EVNSMTELEPLENRSAACREFFSR 580
            WR+ATSMED+KSEI +W+LGAGIYISFY ++ S+Q + N+MTEL+ L++++AAC++F S+
Sbjct: 882  WRIATSMEDYKSEIENWELGAGIYISFYSMRNSLQGDANTMTELDSLQSKNAACQDFVSQ 941

Query: 579  LNESLDVWGSRLPVDARASYSKMAEEICCLLQSS-GDGSSCDVRLNCYDTMGKAPLPEDL 403
            LNESL VWG RLP+DAR  YSKMA +IC LL S+ G+G+S D +  C++T   AP+PEDL
Sbjct: 942  LNESLAVWGYRLPIDARVVYSKMASQICDLLLSAVGEGASRDEQFGCFNTAFSAPIPEDL 1001

Query: 402  RSCHMQEAISHFTHFLTETAS 340
            RS H+Q+A+  FT +L+E A+
Sbjct: 1002 RSGHLQDAVYLFTSYLSEIAT 1022