BLASTX nr result

ID: Cimicifuga21_contig00001058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001058
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-65
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   254   4e-65
ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   250   6e-64
emb|CBI15927.3| unnamed protein product [Vitis vinifera]              247   5e-63
ref|XP_004153401.1| PREDICTED: LOW QUALITY PROTEIN: ran-binding ...   246   1e-62

>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  256 bits (653), Expect = 1e-65
 Identities = 125/158 (79%), Positives = 138/158 (87%)
 Frame = +2

Query: 149 TGAQIAPIVKLXXXXXXXXXXXXNVLLDLKSKLYRFDKEGNQWKERGAGTVKLLKHKESG 328
           TGAQ+APIVKL            + +LDLKSKLYRFDK+GNQWKERGAGTVKLLKHKESG
Sbjct: 24  TGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESG 83

Query: 329 KVRLVMRQSKTLKICANHLVLPSTSVQEHAGNEKSCVWHATDFSDGELKEELFCIRFASI 508
           KVRLVMRQSKTLKICANHLVLP+ SVQEHAGN+KSCVWHATDF+DGELK+ELFCIRFAS+
Sbjct: 84  KVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASV 143

Query: 509 ENCKTFKEMVQEVAESQENKTESKEATATADLLEKLSV 622
           ENCKTF EM QEVAESQE+K E+++AT  AD LEKLSV
Sbjct: 144 ENCKTFMEMFQEVAESQESKEENEDATVAADALEKLSV 181


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
           unknown [Populus trichocarpa]
           gi|222845745|gb|EEE83292.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  254 bits (648), Expect = 4e-65
 Identities = 124/158 (78%), Positives = 137/158 (86%)
 Frame = +2

Query: 149 TGAQIAPIVKLXXXXXXXXXXXXNVLLDLKSKLYRFDKEGNQWKERGAGTVKLLKHKESG 328
           TGAQ+APIVKL            + +LDLKSKLYRFDK+GNQWKERGAGTVK LKHKESG
Sbjct: 24  TGAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESG 83

Query: 329 KVRLVMRQSKTLKICANHLVLPSTSVQEHAGNEKSCVWHATDFSDGELKEELFCIRFASI 508
           KVRLVMRQSKTLKICANHLVLP+ SVQEHAGNEKSCVWHATDF+DGELK+ELFCIRFAS+
Sbjct: 84  KVRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASV 143

Query: 509 ENCKTFKEMVQEVAESQENKTESKEATATADLLEKLSV 622
           ENCKTF EM QEVAESQ++  E+K+ATA AD L+KLSV
Sbjct: 144 ENCKTFMEMFQEVAESQKSNEENKDATAAADALDKLSV 181


>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  250 bits (638), Expect = 6e-64
 Identities = 122/158 (77%), Positives = 138/158 (87%)
 Frame = +2

Query: 149 TGAQIAPIVKLXXXXXXXXXXXXNVLLDLKSKLYRFDKEGNQWKERGAGTVKLLKHKESG 328
           TGAQ+APIVKL            + +LDLK+KLYRFDK+GNQWKERGAG+VKLLKHKESG
Sbjct: 23  TGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESG 82

Query: 329 KVRLVMRQSKTLKICANHLVLPSTSVQEHAGNEKSCVWHATDFSDGELKEELFCIRFASI 508
           KVRLVMRQSKTLKICANHLVLP+ SVQEHAGN+KSCVWHATDF+DGELK+ELFCIRFAS+
Sbjct: 83  KVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASV 142

Query: 509 ENCKTFKEMVQEVAESQENKTESKEATATADLLEKLSV 622
           ENCK+F E VQEVAESQ+ K E+K+A+A A LLEKLSV
Sbjct: 143 ENCKSFMEKVQEVAESQQKKEENKDASAAAGLLEKLSV 180


>emb|CBI15927.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score =  247 bits (630), Expect = 5e-63
 Identities = 120/156 (76%), Positives = 136/156 (87%)
 Frame = +2

Query: 149 TGAQIAPIVKLXXXXXXXXXXXXNVLLDLKSKLYRFDKEGNQWKERGAGTVKLLKHKESG 328
           TGAQ+APIVKL            + +LDLK+KLYRFDK+GNQWKERGAG+VKLLKHKESG
Sbjct: 23  TGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESG 82

Query: 329 KVRLVMRQSKTLKICANHLVLPSTSVQEHAGNEKSCVWHATDFSDGELKEELFCIRFASI 508
           KVRLVMRQSKTLKICANHLVLP+ SVQEHAGN+KSCVWHATDF+DGELK+ELFCIRFAS+
Sbjct: 83  KVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASV 142

Query: 509 ENCKTFKEMVQEVAESQENKTESKEATATADLLEKL 616
           ENCK+F E VQEVAESQ+ K E+K+A+A A LLEKL
Sbjct: 143 ENCKSFMEKVQEVAESQQKKEENKDASAAAGLLEKL 178


>ref|XP_004153401.1| PREDICTED: LOW QUALITY PROTEIN: ran-binding protein 1 homolog
           c-like [Cucumis sativus]
           gi|449517630|ref|XP_004165848.1| PREDICTED: LOW QUALITY
           PROTEIN: ran-binding protein 1 homolog c-like [Cucumis
           sativus] gi|194462393|gb|ACF72671.1| Ran-binding protein
           1 [Cucumis melo var. cantalupensis]
          Length = 197

 Score =  246 bits (627), Expect = 1e-62
 Identities = 120/158 (75%), Positives = 134/158 (84%)
 Frame = +2

Query: 149 TGAQIAPIVKLXXXXXXXXXXXXNVLLDLKSKLYRFDKEGNQWKERGAGTVKLLKHKESG 328
           TGAQ+APIVKL            + +LDLKSKLYRFDK+GNQWKERGAGTVK LKHKE+G
Sbjct: 22  TGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETG 81

Query: 329 KVRLVMRQSKTLKICANHLVLPSTSVQEHAGNEKSCVWHATDFSDGELKEELFCIRFASI 508
           +VRLVMRQSKTLKICANHLVLPS +VQEH GNEKSCVWHATDF+DGELK+ELFCIRF SI
Sbjct: 82  RVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFADGELKDELFCIRFPSI 141

Query: 509 ENCKTFKEMVQEVAESQENKTESKEATATADLLEKLSV 622
           +NCKTF E  QEVAESQ+ K E+K+A+A A LLEKLSV
Sbjct: 142 DNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSV 179


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