BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001022
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...   151   2e-34
sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   139   6e-31
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   139   8e-31
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]          139   8e-31
gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]                     135   1e-29

>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score =  151 bits (381), Expect = 2e-34
 Identities = 90/145 (62%), Positives = 104/145 (71%), Gaps = 7/145 (4%)
 Frame = -3

Query: 663 SSTFP----KQALNFPTQNPKFSRKATFLPPISAVS--EKVEKIGKDLSQLTLVEARSLV 502
           SS+FP    KQ L+FP +NPK   +ATF+ PISAV+  EK+EKIG +LS LTL EAR LV
Sbjct: 19  SSSFPTHSFKQTLDFPFRNPKIIHRATFVRPISAVAAPEKIEKIGTELSNLTLEEARILV 78

Query: 501 DWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVVIEEVPTNARIATIKAVRA 325
           DWLQD+LGVS                       E KTEFDV+IE+VP+NARIATIKAVRA
Sbjct: 79  DWLQDKLGVSAAAFAPAAVAVAPGAVADAPAVVEEKTEFDVMIEDVPSNARIATIKAVRA 138

Query: 324 LTSLALKEAKELIEGLPKKFREAVT 250
           LTSLALKEAKELIEGLPKKF+E V+
Sbjct: 139 LTSLALKEAKELIEGLPKKFKEGVS 163


>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  139 bits (351), Expect = 6e-31
 Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 11/153 (7%)
 Frame = -3

Query: 675 PSPSSST-------FPKQALNFPTQNPKF-SRKATFLPPISAVS--EKVEKIGKDLSQLT 526
           PSPS++T       FPK+ L FP + PK  +R+ATFL P++AV   EKV ++G ++S LT
Sbjct: 13  PSPSTATSTHASIPFPKKTLEFPIRTPKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLT 72

Query: 525 LVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVVIEEVPTNARI 349
           L +A+ LV++LQD+LGV+                       E KTEFDVVI+EVP+NARI
Sbjct: 73  LADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARI 132

Query: 348 ATIKAVRALTSLALKEAKELIEGLPKKFREAVT 250
           ATIKAVRALTSLALKEAKELIEGLPKKF+E V+
Sbjct: 133 ATIKAVRALTSLALKEAKELIEGLPKKFKEGVS 165


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  139 bits (350), Expect = 8e-31
 Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 9/151 (5%)
 Frame = -3

Query: 675 PSPSSST-----FPKQALNFPTQNPKFS-RKATFLPPISAVS--EKVEKIGKDLSQLTLV 520
           PS +SST     FPK+AL FP + PK   R+ATFL P++AV   EKV ++G ++S LTL 
Sbjct: 15  PSTASSTHASIPFPKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLA 74

Query: 519 EARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVVIEEVPTNARIAT 343
           +A+ LV++LQD+LGV+                       E KTEFDVVI+EVP+NARIAT
Sbjct: 75  DAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIAT 134

Query: 342 IKAVRALTSLALKEAKELIEGLPKKFREAVT 250
           IKAVRALTSLALKEAKELIEGLPKKF+E V+
Sbjct: 135 IKAVRALTSLALKEAKELIEGLPKKFKEGVS 165


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score =  139 bits (350), Expect = 8e-31
 Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 9/151 (5%)
 Frame = -3

Query: 675 PSPSSST-----FPKQALNFPTQNPKFS-RKATFLPPISAVS--EKVEKIGKDLSQLTLV 520
           PS +SST     FPK+AL FP + PK   R+ATFL P++AV   EKV ++G ++S LTL 
Sbjct: 15  PSTASSTHASIPFPKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLA 74

Query: 519 EARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVVIEEVPTNARIAT 343
           +A+ LV++LQD+LGV+                       E KTEFDVVI+EVP+NARIAT
Sbjct: 75  DAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIAT 134

Query: 342 IKAVRALTSLALKEAKELIEGLPKKFREAVT 250
           IKAVRALTSLALKEAKELIEGLPKKF+E V+
Sbjct: 135 IKAVRALTSLALKEAKELIEGLPKKFKEGVS 165


>gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]
          Length = 161

 Score =  135 bits (339), Expect = 1e-29
 Identities = 82/149 (55%), Positives = 102/149 (68%), Gaps = 11/149 (7%)
 Frame = -3

Query: 675 PSPSSST-------FPKQALNFPTQNPKFS-RKATFLPPISAVS--EKVEKIGKDLSQLT 526
           PSPS++T       FPK+ L FP + PK   R+ATFL P++AV   EKV ++G ++S LT
Sbjct: 13  PSPSTATSTHASIPFPKKTLEFPIRTPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLT 72

Query: 525 LVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVVIEEVPTNARI 349
           L +A+ LV++LQD+LGV+                       E KTEFDVVI+EVP+NARI
Sbjct: 73  LADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPGVVEEKTEFDVVIDEVPSNARI 132

Query: 348 ATIKAVRALTSLALKEAKELIEGLPKKFR 262
           ATIKAVRALTSLALKEAKELIEGLPKKF+
Sbjct: 133 ATIKAVRALTSLALKEAKELIEGLPKKFK 161