BLASTX nr result

ID: Cimicifuga21_contig00001018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001018
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|1...   229   8e-58
ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252...   228   2e-57
ref|XP_004143189.1| PREDICTED: uncharacterized protein LOC101220...   216   9e-54
ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966...   204   4e-50
gb|ACU16340.1| unknown [Glycine max]                                  204   4e-50

>ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|118481523|gb|ABK92704.1|
           unknown [Populus trichocarpa]
           gi|222858598|gb|EEE96145.1| predicted protein [Populus
           trichocarpa]
          Length = 227

 Score =  229 bits (585), Expect = 8e-58
 Identities = 119/222 (53%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
 Frame = +3

Query: 309 KRKPPSLLQLCIQTTIDNVRYLGDVGETDIHLLKDILPHCTSDQLMHIEKSTKGRDLSPA 488
           KRK PSL+ LC+   ++NV+YLGDVGETD+HLL  ILPHCT DQLMHIEKST GRDLS  
Sbjct: 5   KRKVPSLVDLCVSLAVENVKYLGDVGETDLHLLDRILPHCTLDQLMHIEKSTVGRDLSSV 64

Query: 489 TNKLWRRFFEKKFGIECVNDVIKKMKEQKTRIKWRECYXXXXXXXXXXXXXXXXXXXXXY 668
           T+KLW+ F+EK+FG    + VI++M+++K   +W + Y                     Y
Sbjct: 65  TDKLWKTFYEKQFGERSTDLVIQRMRQKKVSFRWLQLYEAKLKDIAEAENKLAARIRQLY 124

Query: 669 KKETDRKQSRQIRITSKVPPSSNKRAFYGGSGTCNNFSNTKGNLMKKARMEYLNSHEVKV 848
           KKE DRKQSRQ+R+ SKVPPSSNKR+F GGSG   N SN K NLMKKA+M++L S EV+ 
Sbjct: 125 KKEDDRKQSRQVRLCSKVPPSSNKRSFCGGSGPGYNLSNGKSNLMKKAKMDFLKSREVQN 184

Query: 849 HQAMRQNALKRSQGVSRSVKPFG-FLGKDSASSSKFAKPFRR 971
             AM++NAL+R+   S  +KP G F GK SASS+      RR
Sbjct: 185 IAAMKKNALQRNSSSSSMMKPPGSFPGKSSASSNPMKPRERR 226


>ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera]
           gi|302143487|emb|CBI22048.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  228 bits (582), Expect = 2e-57
 Identities = 121/225 (53%), Positives = 155/225 (68%)
 Frame = +3

Query: 297 DMVLKRKPPSLLQLCIQTTIDNVRYLGDVGETDIHLLKDILPHCTSDQLMHIEKSTKGRD 476
           +M++KRK PSL+ LCI+T IDNVRYLGDVGETDI+LL  ILPHCT DQLMHIEK T+ RD
Sbjct: 2   NMMVKRKVPSLVDLCIRTAIDNVRYLGDVGETDINLLDHILPHCTVDQLMHIEKCTEERD 61

Query: 477 LSPATNKLWRRFFEKKFGIECVNDVIKKMKEQKTRIKWRECYXXXXXXXXXXXXXXXXXX 656
           LS  T+KLW++F+EK+FG++  N V+++MK +K   KW + Y                  
Sbjct: 62  LSEVTDKLWKKFYEKEFGVKSTNLVVERMKLKKVSFKWSKLYEAKLKDRDEAQKKSFDRI 121

Query: 657 XXXYKKETDRKQSRQIRITSKVPPSSNKRAFYGGSGTCNNFSNTKGNLMKKARMEYLNSH 836
              Y+KE  RKQSRQ++I +KVPPSSNKR FYGG GT    SN K NLMKKA++E LNS 
Sbjct: 122 KQLYQKEDARKQSRQVKICTKVPPSSNKRCFYGGPGT----SNLKSNLMKKAKVECLNSP 177

Query: 837 EVKVHQAMRQNALKRSQGVSRSVKPFGFLGKDSASSSKFAKPFRR 971
           EVK   AM++ AL +S+ ++ + K   F GKD AS+S   KP +R
Sbjct: 178 EVKNLAAMKKQAL-QSRCIAPARKLGSFSGKDCASTSNLTKPMQR 221


>ref|XP_004143189.1| PREDICTED: uncharacterized protein LOC101220364 [Cucumis sativus]
          Length = 225

 Score =  216 bits (550), Expect = 9e-54
 Identities = 109/213 (51%), Positives = 149/213 (69%)
 Frame = +3

Query: 312 RKPPSLLQLCIQTTIDNVRYLGDVGETDIHLLKDILPHCTSDQLMHIEKSTKGRDLSPAT 491
           RK PSL+ LC+   IDN+R+LGDVGETDIHLL  ILPHCT DQLMH+EKS++GRDL+P T
Sbjct: 5   RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVT 64

Query: 492 NKLWRRFFEKKFGIECVNDVIKKMKEQKTRIKWRECYXXXXXXXXXXXXXXXXXXXXXYK 671
           +KLW++F+E++FG E    VI++M++++   +W + Y                     Y 
Sbjct: 65  DKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMEDIEKNESKAADRIKQSYL 124

Query: 672 KETDRKQSRQIRITSKVPPSSNKRAFYGGSGTCNNFSNTKGNLMKKARMEYLNSHEVKVH 851
           KE  RKQSRQI+I SKVPPSSNKR+F GGSG   N +NTK  ++KKA++E L S E+K  
Sbjct: 125 KENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNI 183

Query: 852 QAMRQNALKRSQGVSRSVKPFGFLGKDSASSSK 950
           +A R+NA+++S  +S + KP  F G++SAS+SK
Sbjct: 184 KAWRRNAVQKSSDISSTKKPM-FSGRESASTSK 215


>ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1|
           Elongin-A [Medicago truncatula]
          Length = 232

 Score =  204 bits (519), Expect = 4e-50
 Identities = 101/216 (46%), Positives = 140/216 (64%)
 Frame = +3

Query: 294 RDMVLKRKPPSLLQLCIQTTIDNVRYLGDVGETDIHLLKDILPHCTSDQLMHIEKSTKGR 473
           R  +  RK PSL+ LC+QT IDN+RYLG+VG  D HLL+ ILPHCT DQL HIEK+++G 
Sbjct: 4   RGQISARKTPSLVDLCVQTAIDNLRYLGNVGPVDHHLLERILPHCTLDQLTHIEKASEGM 63

Query: 474 DLSPATNKLWRRFFEKKFGIECVNDVIKKMKEQKTRIKWRECYXXXXXXXXXXXXXXXXX 653
           DLSP T+KLW++FFEK+FGI C N++I++M E++   +W + Y                 
Sbjct: 64  DLSPVTDKLWKKFFEKQFGISCTNEIIRRMTEKRVSFRWLQLYEAKGKEVAQAENEAIDR 123

Query: 654 XXXXYKKETDRKQSRQIRITSKVPPSSNKRAFYGGSGTCNNFSNTKGNLMKKARMEYLNS 833
               YK    +KQSRQ++  +K+PPSS KR F+G +G   N SN K N+MKK+++E+L S
Sbjct: 124 LRERYKNADAKKQSRQVKTCTKLPPSS-KRRFWGDNGPGYNVSNVKSNIMKKSKIEFLKS 182

Query: 834 HEVKVHQAMRQNALKRSQGVSRSVKPFGFLGKDSAS 941
            EVK   AM++N++ RS   S S+K     G  S+S
Sbjct: 183 REVKNIAAMKKNSIPRSSSSSSSMKIGSMSGVGSSS 218


>gb|ACU16340.1| unknown [Glycine max]
          Length = 230

 Score =  204 bits (519), Expect = 4e-50
 Identities = 102/203 (50%), Positives = 136/203 (66%), Gaps = 2/203 (0%)
 Frame = +3

Query: 294 RDMVLKR--KPPSLLQLCIQTTIDNVRYLGDVGETDIHLLKDILPHCTSDQLMHIEKSTK 467
           RD +  R  + PSL+ LC+Q  IDNVRYLG+VG  D HLL+ ILPHCT+DQLMH+EKSTK
Sbjct: 4   RDQIRAREMRTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEKSTK 63

Query: 468 GRDLSPATNKLWRRFFEKKFGIECVNDVIKKMKEQKTRIKWRECYXXXXXXXXXXXXXXX 647
           GR+ SP T+KLW++F+EK+FG    N+VIK+MK+++   +W + Y               
Sbjct: 64  GRNPSPVTDKLWKKFYEKQFGTNNTNEVIKRMKKKRVNFRWMQLYEAKGKERAQAENEAL 123

Query: 648 XXXXXXYKKETDRKQSRQIRITSKVPPSSNKRAFYGGSGTCNNFSNTKGNLMKKARMEYL 827
                 YKKE  RKQSRQ+R  +KVPPSS KR F+G +G   N SN K N+MKKA++E+L
Sbjct: 124 DRIRQLYKKEDARKQSRQVRTCTKVPPSS-KRRFWGDNGPGYNVSNVKSNIMKKAKIEFL 182

Query: 828 NSHEVKVHQAMRQNALKRSQGVS 896
            SHEVK   AM+  +++R+   S
Sbjct: 183 KSHEVKNLAAMKNKSIQRNPSSS 205


Top