BLASTX nr result
ID: Cimicifuga21_contig00000773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000773
(273 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucu... 176 2e-42
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 176 2e-42
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 176 2e-42
gb|ABD61727.1| polyubiquitin [Lupinus albus] 176 2e-42
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 176 2e-42
>ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 24 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 83
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 84 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 113
Score = 68.9 bits (167), Expect = 4e-10
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 171 QDKEGIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
+DKEGIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 4 EDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 37
Score = 55.5 bits (132), Expect = 5e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGG 80
EDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 100 EDGRTLADYNIQKESTLHLVLRLRGG 125
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 102 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 161
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 162 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 191
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 178 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 237
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 238 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 267
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 254 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 313
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 314 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 343
Score = 101 bits (251), Expect = 7e-20
Identities = 63/115 (54%), Positives = 63/115 (54%), Gaps = 51/115 (44%)
Frame = +3
Query: 81 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE-------------------------- 182
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIES 60
Query: 183 -------------------------GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 61 SLALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 115
Score = 55.5 bits (132), Expect = 5e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGG 80
EDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 330 EDGRTLADYNIQKESTLHLVLRLRGG 355
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 110
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 186
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 431 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 490
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 491 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 520
Score = 174 bits (442), Expect = 5e-42
Identities = 88/90 (97%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 444
Score = 172 bits (435), Expect = 3e-41
Identities = 87/90 (96%), Positives = 88/90 (97%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKE 338
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTL+DYNIQKE
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Score = 125 bits (313), Expect = 5e-27
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +3
Query: 81 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLADYN 260
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 261 IQKE 272
IQKE
Sbjct: 61 IQKE 64
Score = 55.5 bits (132), Expect = 5e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGG 80
EDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 507 EDGRTLADYNIQKESTLHLVLRLRGG 532
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 9 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 68
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 69 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 98
Score = 95.9 bits (237), Expect = 3e-18
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 146
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT
Sbjct: 85 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 132
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 11 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 70
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 71 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 100
Score = 176 bits (445), Expect = 2e-42
Identities = 89/90 (98%), Positives = 89/90 (98%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 87 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 146
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 147 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 176
Score = 174 bits (441), Expect = 7e-42
Identities = 88/90 (97%), Positives = 88/90 (97%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 182
EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK KIQDKE
Sbjct: 163 EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKE 222
Query: 183 GIPPDQQRLIFAGKQLGDGRTLADYNIQKE 272
GIPPDQQRLIFAGKQL DGRTLADYNIQKE
Sbjct: 223 GIPPDQQRLIFAGKQLEDGRTLADYNIQKE 252
Score = 55.5 bits (132), Expect = 5e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 EDGRTLADYNIQKESTLHLVLRLRGG 80
EDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 239 EDGRTLADYNIQKESTLHLVLRLRGG 264