BLASTX nr result
ID: Cimicifuga21_contig00000700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000700
(2726 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 864 0.0
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2... 823 0.0
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ... 756 0.0
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ... 756 0.0
ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis ... 754 0.0
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 864 bits (2232), Expect = 0.0
Identities = 496/926 (53%), Positives = 598/926 (64%), Gaps = 86/926 (9%)
Frame = -3
Query: 2604 ERSRALSDKSREAVGRLLSRTNSRRSAGKKKLDSHICWPDDADMSEGSSGQDKQSTEAGP 2425
+ S L++ SREAVG+LL R N RRS+G +KLDS C S G G K+S
Sbjct: 185 DESGTLAEISREAVGKLLRRANPRRSSGIRKLDS--C--SQQCESTGLIGS-KRSEILDT 239
Query: 2424 YCTHTHGTVYPEEKGE----KETISCALPEKK---------EDMNELEWEDGFIPIPDSR 2284
T + E G + T+ + EK ED+NE +WE+G IP DS
Sbjct: 240 GGRVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNSGEDINESDWEEGSIPTLDSV 299
Query: 2283 GQHDN-----VVVEFYDSPSTSKKKPIRRATAEDKELAELVHKVHLLCLVARGRLVDSAC 2119
H N V +E +S++KPIRRA+AEDKELAELVHKVHLLCL+ARGRL+DSAC
Sbjct: 300 DNHQNAGIKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLIDSAC 359
Query: 2118 SDPLIQGAXXXXXXXXXLKIEDVPNLTANTLAPLVKWFHDNFRVECSDLQERSFKSRLSF 1939
+DPL+Q + LKI ++P LTAN LV+WFHDNFRV ER S L+F
Sbjct: 360 NDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSLAF 419
Query: 1938 ALENRKGTAEEVTALSVALFRALNLTARFVAILDVASLKPIADGAGSSSQDATWMDSGIF 1759
ALE +GT EEV ALSVALFRALNLT RFV+ILDVA LKP AD + S+ Q+A GIF
Sbjct: 420 ALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQNANRASGGIF 479
Query: 1758 DSSTLMVTKPRQISLSPVQS-----------PSQKVGFKEKSSYS--------------K 1654
D+STLMV + Q+S SPV+S PSQ K S +
Sbjct: 480 DNSTLMVARKNQVSSSPVKSSSCHVKGNVCEPSQNNACTNKDLKSTRKTAQSTDSPISDQ 539
Query: 1653 VNDTLLNALASKANNDSSEACQT-KVEGSRRKGDLEYELQLEMAVFATATGNQTKSKLGX 1477
+ND +L++LA K SE C T K EGS+RKGDLE+++QLEMA+ ATA G +S G
Sbjct: 540 LNDRMLDSLACKEQFAISEDCITDKPEGSKRKGDLEFKMQLEMALSATAVGIN-ESNGGS 598
Query: 1476 XXXXXXXXXXXXXSPQNKFKRIKTEEGPALSHVISTAIGSRKVGPPLYWAEVFCGEENLT 1297
SP + KRIK EE P S ISTA+GSRK+G PLYWAEVFC ENLT
Sbjct: 599 NVKELFSESSSFSSPLKRVKRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLT 658
Query: 1296 GKWVHADVVNSLIGHEESVEAAISACKRNLRYVVAFAGNGAKDVTRRYCTKWYTIASKRI 1117
GKWVH D +N++I EE VEAA +ACK +LRYVVAF+GNGAKDVTRRYC KWY IAS+RI
Sbjct: 659 GKWVHIDAINAIIDGEEKVEAAAAACKTSLRYVVAFSGNGAKDVTRRYCMKWYRIASQRI 718
Query: 1116 NSQWWDAVLAPLKELESRATGGV--------------------VPMDVQLEDMELQTKAL 997
NS WWDAVLAPLKELE+ A GGV V LEDMEL+T+AL
Sbjct: 719 NSAWWDAVLAPLKELEAGAVGGVEVLKENVKKVRAESSDRNAFVATRDSLEDMELETRAL 778
Query: 996 TEPLPTNQQAYRNHHLYVIERWLTKYEMLRPKGPVLGYCSGHPVYPRTCVQTLQTKQRLL 817
TEPLPTNQQAY+NH LY +ERWLTKY++L PKGPVLG+CSGHPVYPRTCVQTL+TKQR L
Sbjct: 779 TEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQTLKTKQRWL 838
Query: 816 REGLQIKADESPAKVLKHSPKRSKAQASEPGDSKEGDVEGTFALYGKWQTEPLDLPRAVN 637
REGLQ+KADE P KVLK S K SK QA E D + D GT ALYG+WQ EPL LP AVN
Sbjct: 839 REGLQVKADEHPTKVLKCSSKLSKVQALEAVDYGDADPGGTIALYGRWQMEPLCLPCAVN 898
Query: 636 GIVPKNERGQVDVWSDKCLPLGTVHLRLPRMVPVAKRLGINFAPAMVGFEFRNGRSVPIY 457
GIVPKNE GQVDVWS+KCLP GTVHLR+PR+VP+AK+L I+FAPAMVGFEFRNGRS+P++
Sbjct: 899 GIVPKNEWGQVDVWSEKCLPPGTVHLRVPRVVPIAKKLEIDFAPAMVGFEFRNGRSIPVF 958
Query: 456 EGIVVCSEFKDAIMXXXXXXXXXXXXXXXXXXXAQAMSRWYQLLSSIITRQRLKDAYGDD 277
+GIVVC+EFKD I+ A A+SRWYQLLSSI+ RQRL ++YG+
Sbjct: 959 DGIVVCAEFKDTILEVYADEEERRQAEEKRGIEAHAVSRWYQLLSSIVIRQRLNNSYGNG 1018
Query: 276 STSEPSHHLNQSDSAAALQTTA---DRTAL-------------------NEDHKHIFPVA 163
S+ S+ + + ++ ++ Q DR L EDH+H+F +A
Sbjct: 1019 LLSDTSNGIKKVNNRSSWQVEGRDNDRQFLECQQGYVEDTNLDPPSMVFREDHEHVF-IA 1077
Query: 162 DQSFDEESSVRTKRCPCGFLVQVEEL 85
++ FDEE+ VRTKRC CGF +QVEEL
Sbjct: 1078 EEGFDEENLVRTKRCGCGFSIQVEEL 1103
>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
predicted protein [Populus trichocarpa]
Length = 868
Score = 823 bits (2125), Expect = 0.0
Identities = 452/883 (51%), Positives = 564/883 (63%), Gaps = 52/883 (5%)
Frame = -3
Query: 2577 SREAVGRLLSRTNSRRSAGKKKLDSHICWPDDADMSEGSSGQDKQSTEAGPYCTHTHGTV 2398
S EAV +L+ R R S+GKKK D+ + A G KQ +A
Sbjct: 2 SNEAVDKLVRRVKGRGSSGKKKQDNRLQCDSAATGENGLKSNGKQVVDARVTWNDL---- 57
Query: 2397 YPEEKGEKETISCALPEKKEDMNELEWEDGFIPIPDSRGQHDN-----VVVEFYDSPSTS 2233
+ +G + T E ++M++++WEDG I H V +EF +SP ++
Sbjct: 58 --DARGFQTTFQ----ESDQEMDDIDWEDGSSSILGHVKNHPGDGIREVTIEFSESPDSA 111
Query: 2232 KKKPIRRATAEDKELAELVHKVHLLCLVARGRLVDSACSDPLIQGAXXXXXXXXXLKIED 2053
K+KPIRRATAE+K LAELVHKVHLLCL+ARGR++D AC DPLIQ +
Sbjct: 112 KRKPIRRATAEEKGLAELVHKVHLLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLG 171
Query: 2052 VPNLTANTLAPLVKWFHDNFRVECSDLQERSFKSRLSFALENRKGTAEEVTALSVALFRA 1873
P L A L+PL WFH+NF V S ++RSF S LS ALE R+GT EE+ ALSVALFRA
Sbjct: 172 DPKLHAKALSPLAHWFHNNFHVASSVSEKRSFHSALSCALETREGTLEELAALSVALFRA 231
Query: 1872 LNLTARFVAILDVASLKPIADGAGSSSQDATWMDSGIFDSSTLMVTKPRQISLSP----V 1705
L LT RFV+ILDVAS+KP AD S SQ + M GIF++STLMV +P+++ + P
Sbjct: 232 LKLTTRFVSILDVASIKPDADKYESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSC 291
Query: 1704 QSPSQKVGFKEKSSYSKVNDTLLNALASKANNDSSEACQTKV-EGSRRKGDLEYELQLEM 1528
K+ + ++ D +++ +A N++SE C TK +GS+RKGDLE+E+QL+M
Sbjct: 292 NEKKNKIQSNDSPPAVELKDKMVDTFPCEAQNNTSEECVTKKSQGSKRKGDLEFEMQLQM 351
Query: 1527 AVFATATGNQTKSKLGXXXXXXXXXXXXXXSPQNKFKRIKTEEGPALSHVISTAIGSRKV 1348
A+ ATA Q+ +L P + ++I EE S ISTA+GSRK+
Sbjct: 352 AMSATAVATQSNKELDVKESSNSSDVSS---PFKRIRKIANEESS--SQGISTALGSRKI 406
Query: 1347 GPPLYWAEVFCGEENLTGKWVHADVVNSLIGHEESVEAAISACKRNLRYVVAFAGNGAKD 1168
G PLYWAEV+C ENLTGKWVH D V+ ++ E+ VEAA ACK +LRYVVAFAG GAKD
Sbjct: 407 GSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKD 466
Query: 1167 VTRRYCTKWYTIASKRINSQWWDAVLAPLKELESRATGGVVPMDV--------------- 1033
VTRRYC KWY IAS+R+NS WWDAVLAPL+ELES ATGG+ ++
Sbjct: 467 VTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHADASNEHENVIAS 526
Query: 1032 ----------QLEDMELQTKALTEPLPTNQQAYRNHHLYVIERWLTKYEMLRPKGPVLGY 883
+EDMELQT+ALTEPLPTNQQAY+NH LY IE+WLTK ++L PKGP+LG+
Sbjct: 527 GLNSFAATRNTIEDMELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGF 586
Query: 882 CSGHPVYPRTCVQTLQTKQRLLREGLQIKADESPAKVLKHSPKRSKAQASEPGDSKEGDV 703
CSGHPVYPR CVQTL+TK+R LREGLQ+K E PAKV+K S K K Q SE D E D
Sbjct: 587 CSGHPVYPRACVQTLRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGETD- 645
Query: 702 EGTFALYGKWQTEPLDLPRAVNGIVPKNERGQVDVWSDKCLPLGTVHLRLPRMVPVAKRL 523
G LYG WQ EPL LP AVNGIVPKNERGQVDVWS+KCLP GTVHLRLPR+ VAKRL
Sbjct: 646 SGVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRL 705
Query: 522 GINFAPAMVGFEFRNGRSVPIYEGIVVCSEFKDAIMXXXXXXXXXXXXXXXXXXXAQAMS 343
I++APAMVGFEFRNGRSVP+++GIVVC+EFKDAI+ AQA+S
Sbjct: 706 EIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAIS 765
Query: 342 RWYQLLSSIITRQRLKDAYGD-----------DSTSEPSHHLNQSDSAAALQTTADR--- 205
RWYQLLSSIITRQRL ++YG+ ++ ++P H+ + + DR
Sbjct: 766 RWYQLLSSIITRQRLNNSYGNGLLPQMPSNVQNTNNQPDVHVGSTQPPGHQKDAKDRKLN 825
Query: 204 ---TALNEDHKHIFPVADQSFDEESSVRTKRCPCGFLVQVEEL 85
L +DH+H+F V DQSFDEE+S RTKRC CGF VQVEEL
Sbjct: 826 APSMTLTDDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 868
>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
sativus]
Length = 923
Score = 756 bits (1953), Expect = 0.0
Identities = 434/922 (47%), Positives = 552/922 (59%), Gaps = 72/922 (7%)
Frame = -3
Query: 2634 DPMRTRNQPGERSRALSDKSREAVGRLLSRTNSRRSAGKKKLDSHICWPDDADMSEGSSG 2455
DP + +Q L+D SR AV +LLSR + R +G +K C D+S+ + G
Sbjct: 12 DPGGSCSQTSTDRETLADVSRVAVSKLLSRASGRCLSGIRKHALRPC-----DLSKSTIG 66
Query: 2454 QD------KQSTEAGPYCTHTHGTVYPEEKGEKET-ISCALPEKKEDMNELEWEDGFI-P 2299
+D K+ T C E+ E + ++ E ED+++ +WEDG + P
Sbjct: 67 KDVNLAMDKKVTLETERCNENVIASCSEDVDVPEVNLQNSVSEVLEDLDDSDWEDGCVRP 126
Query: 2298 IPDSRGQHDNVVV-EFYDSPSTSKKKPIRRATAEDKELAELVHKVHLLCLVARGRLVDSA 2122
+ + Q + + E + P ++K+KPIRRA+A DKE+AE VHKVHLLCL+ RGRL+D A
Sbjct: 127 LDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRA 186
Query: 2121 CSDPLIQGAXXXXXXXXXLKIEDVPNLTANTLAPLVKWFHDNFRVECSDLQERSFKSRLS 1942
C+DPLIQ A LKI LTA +L PLV W HDNF V E S S L+
Sbjct: 187 CNDPLIQAALLSLLPAHLLKISPAKQLTATSLKPLVAWLHDNFHVRNQARSEGSINSALA 246
Query: 1941 FALENRKGTAEEVTALSVALFRALNLTARFVAILDVASLKPIADGAGSSSQDATWMDSGI 1762
ALE +GT+EE+ AL+V LFRAL++TARFV+ILDVA +KP A+ + SQD I
Sbjct: 247 HALETHEGTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDIGRSSRNI 306
Query: 1761 FDSSTLMVTKPRQISLSPVQSP--SQKVGFKEKSSYSKVNDTLLNALASKAN------ND 1606
F +STLMV K + + S +K ++++S +N + K + +
Sbjct: 307 FKNSTLMVDKAEAVDKDSLTSRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVLNALSST 366
Query: 1605 SSEACQTKVEGS-----------RRKGDLEYELQLEMAVFATATGNQTKSKLGXXXXXXX 1459
S +C +K + S +RKGD+E+E+QL+MA+ ATA +
Sbjct: 367 GSSSCNSKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNS----SINHL 422
Query: 1458 XXXXXXXSPQNKFKRIKTEEGPALSHVISTAIGSRKVGPPLYWAEVFCGEENLTGKWVHA 1279
P K KRI EE A SH ISTA+GS K G PLYWAEV+C ENLTGKWVH
Sbjct: 423 NEPPLNFPPSKKLKRIVNEES-ASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHI 481
Query: 1278 DVVNSLIGHEESVEAAISACKRNLRYVVAFAGNGAKDVTRRYCTKWYTIASKRINSQWWD 1099
D VN ++ E VE +ACK +LRYVVAF+G GAKDVTRRYC KWY I +KR+N+ WWD
Sbjct: 482 DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNNLWWD 541
Query: 1098 AVLAPLKELESRATGGVVPMDVQ----------------------LEDMELQTKALTEPL 985
VLAPL+ LE +A G D LED+EL+T+ALTEPL
Sbjct: 542 NVLAPLRILEGQAVRGTGKSDHNVSEGLVTDRDFSLGNQVATRDHLEDIELETRALTEPL 601
Query: 984 PTNQQAYRNHHLYVIERWLTKYEMLRPKGPVLGYCSGHPVYPRTCVQTLQTKQRLLREGL 805
PTNQQAY+NH LY +E+WLTKY++L PKGPVLG+CSG+PVYPRTCVQ L+TK + LREGL
Sbjct: 602 PTNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKHKWLREGL 661
Query: 804 QIKADESPAKVLKHSPKRSKAQASEPGDSKEGDVEGTFALYGKWQTEPLDLPRAVNGIVP 625
Q++++E P K LK S K+ K SE D +GD +GT LYGKWQ EPL LPRAV+GIVP
Sbjct: 662 QVRSNELPVKELKRSIKKIKILESEADDFDQGDSQGTIPLYGKWQLEPLQLPRAVDGIVP 721
Query: 624 KNERGQVDVWSDKCLPLGTVHLRLPRMVPVAKRLGINFAPAMVGFEFRNGRSVPIYEGIV 445
KNERGQVDVWS+KCLP GTVH+RLPR+ VAK+L I++APAMVGFEFRNGRS PIY+GIV
Sbjct: 722 KNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIV 781
Query: 444 VCSEFKDAIMXXXXXXXXXXXXXXXXXXXAQAMSRWYQLLSSIITRQRLKDAYGDD---- 277
VCSEFKD I+ QA+SRWYQLLSSIITRQRL YGD
Sbjct: 782 VCSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLS 841
Query: 276 ---STSEPSHHLNQSDSAAALQ--------------TTADRTA-LNEDHKHIFPVADQSF 151
S H +D + + T D + +N+DHKH+F + DQ F
Sbjct: 842 QVTSDIRDMHDERNADVPSCQEDVEPFKGQPDNLSNTNMDAPSFINQDHKHVFLLEDQIF 901
Query: 150 DEESSVRTKRCPCGFLVQVEEL 85
DE+S V TKRC CGF VQVEEL
Sbjct: 902 DEKSLVVTKRCHCGFSVQVEEL 923
>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
sativus]
Length = 923
Score = 756 bits (1952), Expect = 0.0
Identities = 434/922 (47%), Positives = 552/922 (59%), Gaps = 72/922 (7%)
Frame = -3
Query: 2634 DPMRTRNQPGERSRALSDKSREAVGRLLSRTNSRRSAGKKKLDSHICWPDDADMSEGSSG 2455
DP + +Q L+D SR AV +LLSR + R +G +K C D+S+ + G
Sbjct: 12 DPGGSCSQTSTDRETLADVSRVAVSKLLSRASGRCLSGIRKHALRPC-----DLSKSTIG 66
Query: 2454 QD------KQSTEAGPYCTHTHGTVYPEEKGEKET-ISCALPEKKEDMNELEWEDGFI-P 2299
+D K+ T C E+ E + ++ E ED+++ +WEDG + P
Sbjct: 67 KDVNLAMDKKVTLETERCNENVIASCSEDVDVPEVNLQNSVSEVLEDLDDSDWEDGCVRP 126
Query: 2298 IPDSRGQHDNVVV-EFYDSPSTSKKKPIRRATAEDKELAELVHKVHLLCLVARGRLVDSA 2122
+ + Q + + E + P ++K+KPIRRA+A DKE+AE VHKVHLLCL+ RGRL+D A
Sbjct: 127 LDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRA 186
Query: 2121 CSDPLIQGAXXXXXXXXXLKIEDVPNLTANTLAPLVKWFHDNFRVECSDLQERSFKSRLS 1942
C+DPLIQ A LKI LTA +L PLV W HDNF V E S S L+
Sbjct: 187 CNDPLIQAALLSLLPAHLLKISPAKQLTATSLKPLVAWLHDNFHVRNQARSEGSINSALA 246
Query: 1941 FALENRKGTAEEVTALSVALFRALNLTARFVAILDVASLKPIADGAGSSSQDATWMDSGI 1762
ALE +GT+EE+ AL+V LFRAL++TARFV+ILDVA +KP A+ + SQD I
Sbjct: 247 HALETHEGTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDIGRSSRNI 306
Query: 1761 FDSSTLMVTKPRQISLSPVQSP--SQKVGFKEKSSYSKVNDTLLNALASKAN------ND 1606
F +STLMV K + + S +K ++++S +N + K + +
Sbjct: 307 FKNSTLMVDKAEAVDKDSLTSRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVLNALSST 366
Query: 1605 SSEACQTKVEGS-----------RRKGDLEYELQLEMAVFATATGNQTKSKLGXXXXXXX 1459
S +C +K + S +RKGD+E+E+QL+MA+ ATA +
Sbjct: 367 GSSSCNSKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNS----SINHL 422
Query: 1458 XXXXXXXSPQNKFKRIKTEEGPALSHVISTAIGSRKVGPPLYWAEVFCGEENLTGKWVHA 1279
P K KRI EE A SH ISTA+GS K G PLYWAEV+C ENLTGKWVH
Sbjct: 423 NEPPLNFPPSKKLKRIVNEES-ASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHI 481
Query: 1278 DVVNSLIGHEESVEAAISACKRNLRYVVAFAGNGAKDVTRRYCTKWYTIASKRINSQWWD 1099
D VN ++ E VE +ACK +LRYVVAF+G GAKDVTRRYC KWY I +KR+N+ WWD
Sbjct: 482 DAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWD 541
Query: 1098 AVLAPLKELESRATGGVVPMDVQ----------------------LEDMELQTKALTEPL 985
VLAPL+ LE +A G D LED+EL+T+ALTEPL
Sbjct: 542 NVLAPLRILEGQAVRGTGKSDHNVSEGLVTDRDFSLGNQVATRDHLEDIELETRALTEPL 601
Query: 984 PTNQQAYRNHHLYVIERWLTKYEMLRPKGPVLGYCSGHPVYPRTCVQTLQTKQRLLREGL 805
PTNQQAY+NH LY +E+WLTKY++L PKGPVLG+CSG+PVYPRTCVQ L+TK + LREGL
Sbjct: 602 PTNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKHKWLREGL 661
Query: 804 QIKADESPAKVLKHSPKRSKAQASEPGDSKEGDVEGTFALYGKWQTEPLDLPRAVNGIVP 625
Q++++E P K LK S K+ K SE D +GD +GT LYGKWQ EPL LPRAV+GIVP
Sbjct: 662 QVRSNELPVKELKRSIKKIKILESEADDFDQGDSQGTIPLYGKWQLEPLQLPRAVDGIVP 721
Query: 624 KNERGQVDVWSDKCLPLGTVHLRLPRMVPVAKRLGINFAPAMVGFEFRNGRSVPIYEGIV 445
KNERGQVDVWS+KCLP GTVH+RLPR+ VAK+L I++APAMVGFEFRNGRS PIY+GIV
Sbjct: 722 KNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIV 781
Query: 444 VCSEFKDAIMXXXXXXXXXXXXXXXXXXXAQAMSRWYQLLSSIITRQRLKDAYGDD---- 277
VCSEFKD I+ QA+SRWYQLLSSIITRQRL YGD
Sbjct: 782 VCSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLS 841
Query: 276 ---STSEPSHHLNQSDSAAALQ--------------TTADRTA-LNEDHKHIFPVADQSF 151
S H +D + + T D + +N+DHKH+F + DQ F
Sbjct: 842 QVTSDIRNMHDERNADVPSCQEDVEPFKGQPDNLSNTNMDAPSFINQDHKHVFLLEDQIF 901
Query: 150 DEESSVRTKRCPCGFLVQVEEL 85
DE+S V TKRC CGF VQVEEL
Sbjct: 902 DEKSLVVTKRCHCGFSVQVEEL 923
>ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis lyrata subsp. lyrata]
gi|297317565|gb|EFH47987.1| DNA repair protein Rad4
family [Arabidopsis lyrata subsp. lyrata]
Length = 868
Score = 754 bits (1947), Expect = 0.0
Identities = 439/891 (49%), Positives = 556/891 (62%), Gaps = 56/891 (6%)
Frame = -3
Query: 2589 LSDKSREAVGRLLSRTNSRRSAGKKKLDSHICWPDDADMSEGSSGQDKQSTEAGPYCTHT 2410
L+ SREAV ++L ++++R S GKKK D + D A +G +G+ KQ+ EA T
Sbjct: 12 LAAASREAVNKVLDKSSARGSRGKKKKDDNC---DSAKRDKGVNGKGKQAVEA----RLT 64
Query: 2409 HGTVYPEEKGEKETISCALPEKKEDMNELEWEDGFIPIPDSRGQHDNV------VVEFYD 2248
+ E C + +++MN+ +WED IP DS NV +EF D
Sbjct: 65 DNVLEDRE--------CGTVDDEDEMNDSDWEDCPIPSLDSTVDVTNVDDTRELTIEFDD 116
Query: 2247 S-PSTSKKKPIRRATAEDKELAELVHKVHLLCLVARGRLVDSACSDPLIQGAXXXXXXXX 2071
P K+K RATAEDKE AELVHKVHLLCL+ARGR+VD AC+DPLIQ A
Sbjct: 117 DVPDAKKQKIAYRATAEDKERAELVHKVHLLCLLARGRIVDDACNDPLIQAALLSLLPSY 176
Query: 2070 XLKIEDVPNLTANTLAPLVKWFHDNFRVECSDLQERSFKSRLSFALENRKGTAEEVTALS 1891
K+ ++ + +APL++W +NF V CS E+SF++ L+FALE+RKGTAEE+ AL+
Sbjct: 177 LTKVSNLEKVIVKDIAPLLRWVRENFSVRCSPSSEKSFRTSLAFALESRKGTAEELAALA 236
Query: 1890 VALFRALNLTARFVAILDVASLKPIADGAGSSSQDATWMDSGIFDSSTLMVTKPRQISLS 1711
VAL RALNLT RFV+ILDVASLKP AD SS Q+ M GIF +STLMV K + IS
Sbjct: 237 VALLRALNLTTRFVSILDVASLKPGADRDESSGQNRAKMKHGIFRTSTLMVPKQQAISSH 296
Query: 1710 PVQSPSQKVGFKEKSSYSKVNDTLLNALAS-----KANNDSSEACQT-KVEGSRRKGDLE 1549
P +S S K KS + N L S A N S EA + K +G+RRKGD+E
Sbjct: 297 PKKSSSH---VKNKSIFDTSEPQRGNPLGSDQLQDNAVNSSCEAGMSRKSDGTRRKGDVE 353
Query: 1548 YELQLEMAVFATATGNQTKSKLGXXXXXXXXXXXXXXSPQNKFKRI-KTEEGPALS-HVI 1375
+E Q+ MA+ ATA NQ S++ + K + I KT + ++S VI
Sbjct: 354 FERQIAMALSATAN-NQQSSQVNN---------------KKKIREITKTSDSSSVSDQVI 397
Query: 1374 STAIGSRKVGPPLYWAEVFCGEENLTGKWVHADVVNSLIGHEESVEAAISACKRNLRYVV 1195
STAIGS+KV PL WAEV+C EN+ G+WVH D VN +I E++VEAA +ACK LRYVV
Sbjct: 398 STAIGSKKVDSPLCWAEVYCNGENIDGRWVHVDAVNGMIDAEKNVEAAAAACKTVLRYVV 457
Query: 1194 AFAGNGAKDVTRRYCTKWYTIASKRINSQWWDAVLAPLKELESRAT-------------- 1057
AFAG GAKDVTRRYCTKW+TI+ KR+ S WWD VLAPL LES AT
Sbjct: 458 AFAGGGAKDVTRRYCTKWHTISPKRVCSVWWDMVLAPLIHLESAATHNEDIALRNFSSLN 517
Query: 1056 ---------GGVVPMDVQLEDMELQTKALTEPLPTNQQAYRNHHLYVIERWLTKYEMLRP 904
+ LEDMEL T+ALTEPLPTNQQAY+ H +Y IE+WL K ++L P
Sbjct: 518 PVANRASSSSSSFGIRSALEDMELATRALTEPLPTNQQAYKTHEIYAIEKWLHKNQILHP 577
Query: 903 KGPVLGYCSGHPVYPRTCVQTLQTKQRLLREGLQIKADESPAKVLKHSPKRSKAQASEPG 724
KGPVLG+CSGHPVYPRTCVQTL+TK+R LR+GLQ+KA+E P+K+LK + K K++ G
Sbjct: 578 KGPVLGFCSGHPVYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRNSKFKKSKDLGDG 637
Query: 723 DSKEGDVEGTFALYGKWQTEPLDLPRAVNGIVPKNERGQVDVWSDKCLPLGTVHLRLPRM 544
D+ LYGKWQ EPL LP AVNGIVPKNERGQVDVWS+KCLP GTVHLR PR+
Sbjct: 638 DNNINGGSYCMELYGKWQMEPLCLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRI 697
Query: 543 VPVAKRLGINFAPAMVGFEFRNGRSVPIYEGIVVCSEFKDAIMXXXXXXXXXXXXXXXXX 364
VAKR GI++APAMVGFE+R+G + PI+EGIVVC+EFKD I+
Sbjct: 698 FSVAKRFGIDYAPAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAEEQEKREEEERRR 757
Query: 363 XXAQAMSRWYQLLSSIITRQRLKDAYGDDSTSEPSHHLN-QSDS---------------A 232
AQA SRWYQLLSSI+TR+RLK Y ++S + L SD+ A
Sbjct: 758 NEAQAASRWYQLLSSILTRERLKSRYANNSKDVETKSLEVNSDTVVKAKNVKAPEKQRVA 817
Query: 231 AALQTTADRTALNED--HKHIFPVADQSFDEESSVRTKRCPCGFLVQVEEL 85
+ + R + NED H+H+F ++FDEE+SV+TKRC CGF V+VE++
Sbjct: 818 KKGEKSRARKSRNEDESHEHVFLDEQETFDEETSVKTKRCKCGFSVEVEQM 868