BLASTX nr result
ID: Cimicifuga21_contig00000614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000614
(2019 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr... 171 5e-78
ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabac... 204 9e-50
gb|AFK37255.1| unknown [Medicago truncatula] 100 1e-28
gb|AFK45797.1| unknown [Lotus japonicus] 100 4e-28
ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis tha... 130 2e-27
>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
gi|355477403|gb|AES58606.1| Mitochondrial protein,
putative [Medicago truncatula]
Length = 1106
Score = 156 bits (394), Expect(3) = 5e-78
Identities = 72/77 (93%), Positives = 72/77 (93%)
Frame = -1
Query: 903 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGYHLLWPD 724
FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQG HLLWPD
Sbjct: 886 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945
Query: 723 LPTFSQLQFTAPLSVRG 673
LPTFSQLQFTAP G
Sbjct: 946 LPTFSQLQFTAPFKCAG 962
Score = 139 bits (349), Expect(3) = 5e-78
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 1357 IRSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 1178
+ SFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH
Sbjct: 800 LSSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 859
Query: 1177 TWVRSSKA 1154
TWVRSSKA
Sbjct: 860 TWVRSSKA 867
Score = 46.2 bits (108), Expect(3) = 5e-78
Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 4/26 (15%)
Frame = -2
Query: 1079 HLW----KAPTPNGLSRCSHFLADPS 1014
H W KAPTPNGLSRCSHFLADPS
Sbjct: 859 HTWVRSSKAPTPNGLSRCSHFLADPS 884
Score = 171 bits (434), Expect(2) = 2e-57
Identities = 81/88 (92%), Positives = 83/88 (94%)
Frame = -3
Query: 265 FFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERRLATELGYGFPIGDPWITDGI 86
F + PIRSRSPLLTGSRLISLPLAT+MFQFAKFEKSKERRLA ELGYGFPIGDPWITDGI
Sbjct: 1000 FLQTPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSKERRLAAELGYGFPIGDPWITDGI 1059
Query: 85 SPWPFASESVLPSQCPGIHPMHSFRYST 2
SPWPFASESVLPSQCPGIHPMHSFR T
Sbjct: 1060 SPWPFASESVLPSQCPGIHPMHSFRSCT 1087
Score = 79.7 bits (195), Expect(2) = 2e-57
Identities = 39/66 (59%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = -2
Query: 443 SGLFWPLL--LGAQESALEFSTLAACWFFHHPIHNKSNETWRKRSEHFAEAELP*EQDVF 270
S L WP L + F ACWFFHHPIHNKSNETWRKRSEHFA E + VF
Sbjct: 939 SHLLWPDLPTFSQLQFTAPFKCAGACWFFHHPIHNKSNETWRKRSEHFAAEEFIILERVF 998
Query: 269 VFLQSP 252
VFLQ+P
Sbjct: 999 VFLQTP 1004
Score = 135 bits (339), Expect = 5e-29
Identities = 82/140 (58%), Positives = 83/140 (59%)
Frame = -1
Query: 1902 RSSNSLQQTGMVQ*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXRKPSTGRRSCFSQD 1723
R S G V+ SKQLRHFRVPIGRQP RKPSTGRRSCFSQD
Sbjct: 693 RQSRRATGPGRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQD 752
Query: 1722 FSLLMSAFSLLISPGVVTKNLPRLTERPATDT*KSSFQGLVASVNHLSPDTFSVPWS*TS 1543
SLLMSAFSLLISPGVVTKNLPRLTERP TS
Sbjct: 753 LSLLMSAFSLLISPGVVTKNLPRLTERP------------------------------TS 782
Query: 1542 ELLRFLQRMAASKPTSWLSS 1483
ELLRFLQRMAASKPTSWLSS
Sbjct: 783 ELLRFLQRMAASKPTSWLSS 802
>ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabacum]
gi|57014030|ref|YP_173501.1| hypothetical protein
NitaMp164 [Nicotiana tabacum]
gi|56806536|dbj|BAD83437.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
gi|56806666|dbj|BAD83567.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 138
Score = 204 bits (518), Expect = 9e-50
Identities = 100/112 (89%), Positives = 102/112 (91%)
Frame = -3
Query: 337 MKPGEKEVNTLLRQSYLKSKTCLFFFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFEKS 158
MKPGEKEVNTLLR +CLFFFK PIRSRSPLLTGSRLISLPLAT+MFQFAKFEKS
Sbjct: 1 MKPGEKEVNTLLRNE----ASCLFFFKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKS 56
Query: 157 KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRYST 2
KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFR T
Sbjct: 57 KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108
>gb|AFK37255.1| unknown [Medicago truncatula]
Length = 69
Score = 99.8 bits (247), Expect(2) = 1e-28
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +3
Query: 1485 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 1619
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45
Score = 55.5 bits (132), Expect(2) = 1e-28
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 1624 SSVSSGTFCQSGKVFGDNTWRYQK 1695
SSVSSGTFCQSGKVFGDNTWRYQK
Sbjct: 46 SSVSSGTFCQSGKVFGDNTWRYQK 69
>gb|AFK45797.1| unknown [Lotus japonicus]
Length = 69
Score = 99.8 bits (247), Expect(2) = 4e-28
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +3
Query: 1485 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 1619
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45
Score = 53.5 bits (127), Expect(2) = 4e-28
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 1624 SSVSSGTFCQSGKVFGDNTWRYQK 1695
SSVSSGTFCQSGKVFGDNTWRY K
Sbjct: 46 SSVSSGTFCQSGKVFGDNTWRYHK 69
>ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis thaliana]
gi|41017293|sp|P93276.1|M030_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg00030;
AltName: Full=ORF107a gi|1785675|emb|CAA69780.1| unnamed
protein product [Arabidopsis thaliana]
Length = 107
Score = 130 bits (326), Expect = 2e-27
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -3
Query: 187 MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRY 8
MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFR
Sbjct: 1 MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRS 60
Query: 7 ST 2
T
Sbjct: 61 CT 62