BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000347
         (1831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   325   2e-86
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              313   1e-82
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   306   9e-81
ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago ...   303   1e-79
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   299   1e-78

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
            gi|296081186|emb|CBI18212.3| unnamed protein product
            [Vitis vinifera]
          Length = 332

 Score =  325 bits (834), Expect = 2e-86
 Identities = 182/353 (51%), Positives = 223/353 (63%), Gaps = 1/353 (0%)
 Frame = -3

Query: 1577 MDLDDLRLILRNSGVDVWSLIDTAISIASEDYSNEIRDRRDGIVERLYAQPPVVISQCQN 1398
            MD D+ R IL +SGVDVW+LI+TA+S+AS DYS E + RRD IVERLY     V+S+C N
Sbjct: 1    MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTP---VVSRCLN 57

Query: 1397 CNHEDV-KVSREMKEKESCSQEGKGGSPPTPQWINNXXXXXXXXXXEGRVYGRRRLMDDE 1221
            C+ + + K + +   KE   Q        TP+ +                  R   +D+E
Sbjct: 58   CDRDRIHKPNGDRSVKEKMDQLQDESWIETPESVERD---------------RDGSIDEE 102

Query: 1220 QNKILDIKEQLEDPRQSEEALVSLLQELEDMDITFKVLKETDIGRHVNLLRKHPSSEVRR 1041
            Q+KIL IKE+LEDP Q E++LV LLQ L DMDITFK LKETDIGRHVN LRKHPS+EVRR
Sbjct: 103  QSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRR 162

Query: 1040 MVKNVVRKWKYRVDAWVKGSSQGETAPSTFIADGDSPLQNPPRIIQNGHHQVSDFNYSPS 861
            +VK +VRKWK  VD WVK S+ GET  S  +ADGDSP QN  +   N HHQV DF YSP+
Sbjct: 163  LVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVPDFAYSPN 222

Query: 860  PNTHXXXXXXXXXXXXXXPKRKVVPRKEPQIRPSHSPQVSNSSALPNKMKEQKSTAIDAE 681
            P  H              PKRK VPR+E   +P+ +P +  S AL NK +EQK + +D E
Sbjct: 223  P--HNGSSGSDKNNVELEPKRKAVPRRETPNKPNQTPPIPTSVAL-NKQREQKDSLVDEE 279

Query: 680  RLASARKRLHDNYQEAQNAKKNRTIQVMDIHDIXXXXXXXXXXXXXXSQTRHW 522
            +LASAR+RLH+NYQEAQNAKK RTIQVMDIHDI               Q +HW
Sbjct: 280  KLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNRGGVQAKHW 332


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  313 bits (801), Expect = 1e-82
 Identities = 185/355 (52%), Positives = 221/355 (62%), Gaps = 4/355 (1%)
 Frame = -3

Query: 1577 MDLDDLRLILRNSGVDVWSLIDTAISIASEDYSNEIRDRRDGIVERLYAQPPVVISQCQN 1398
            MD D+ RLILRNSGVDVW  I+TAIS+A  DY +E+R RRDGIVER+Y       S+C +
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS-----SRCGS 55

Query: 1397 CN----HEDVKVSREMKEKESCSQEGKGGSPPTPQWINNXXXXXXXXXXEGRVYGRRRLM 1230
            CN    H  +    + +EKE    + K  SP TPQ IN               YG   L+
Sbjct: 56   CNLRYQHSGLDKGCD-EEKEDEKDDEKDKSPLTPQSINRSGSEDR--------YGG--LL 104

Query: 1229 DDEQNKILDIKEQLEDPRQSEEALVSLLQELEDMDITFKVLKETDIGRHVNLLRKHPSSE 1050
            D+E+ +ILDIKE LE P Q ++++V LLQ L DMDITFK LKETDIGRHVN LRKHPS++
Sbjct: 105  DEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSND 164

Query: 1049 VRRMVKNVVRKWKYRVDAWVKGSSQGETAPSTFIADGDSPLQNPPRIIQNGHHQVSDFNY 870
            VRR+VK++VRKWK  VD WVK +  GE   S  +A+GDSP Q  PR    GHHQV DF Y
Sbjct: 165  VRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPR---TGHHQVPDFGY 221

Query: 869  SPSPNTHXXXXXXXXXXXXXXPKRKVVPRKEPQIRPSHSPQVSNSSALPNKMKEQKSTAI 690
            SP+P                 PK K +PRKE   RP+ S  VS+S   PNK   Q+ TAI
Sbjct: 222  SPNPQN--GSSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNK---QRDTAI 276

Query: 689  DAERLASARKRLHDNYQEAQNAKKNRTIQVMDIHDIXXXXXXXXXXXXXXSQTRH 525
            D ++ ASARKRLH+NYQEAQNAKK RTIQVMDIHDI              SQ RH
Sbjct: 277  DPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 331


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
            vinifera]
          Length = 331

 Score =  306 bits (785), Expect = 9e-81
 Identities = 184/355 (51%), Positives = 221/355 (62%), Gaps = 4/355 (1%)
 Frame = -3

Query: 1577 MDLDDLRLILRNSGVDVWSLIDTAISIASEDYSNEIRDRRDGIVERLYAQPPVVISQCQN 1398
            MD D+ RLILRNSGVDVW  I+TAIS+A  DY +E+R RRDGIVER+Y       S+C +
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS-----SRCGS 55

Query: 1397 CN----HEDVKVSREMKEKESCSQEGKGGSPPTPQWINNXXXXXXXXXXEGRVYGRRRLM 1230
            CN    H  +    + +EKE    + K  SP TPQ IN               YG   L+
Sbjct: 56   CNLRYQHSGLDKGCD-EEKEDEKDDEKDKSPLTPQSINRSGSEDR--------YGG--LL 104

Query: 1229 DDEQNKILDIKEQLEDPRQSEEALVSLLQELEDMDITFKVLKETDIGRHVNLLRKHPSSE 1050
            D+E+ +ILDIKE LE P Q ++++V LLQ L DMDITFK LKETDIGRHVN LRKHPS++
Sbjct: 105  DEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSND 164

Query: 1049 VRRMVKNVVRKWKYRVDAWVKGSSQGETAPSTFIADGDSPLQNPPRIIQNGHHQVSDFNY 870
            VRR+VK++VRKWK  VD WVK +  GE   S+ + +GDSP Q  PR    GHHQV DF Y
Sbjct: 165  VRRLVKHLVRKWKDLVDEWVKSNPAGEFT-SSALMEGDSPPQKIPR---TGHHQVPDFGY 220

Query: 869  SPSPNTHXXXXXXXXXXXXXXPKRKVVPRKEPQIRPSHSPQVSNSSALPNKMKEQKSTAI 690
            SP+P                 PK K +PRKE   RP+ S  VS+S   PNK   Q+ TAI
Sbjct: 221  SPNPQN--GSSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNK---QRDTAI 275

Query: 689  DAERLASARKRLHDNYQEAQNAKKNRTIQVMDIHDIXXXXXXXXXXXXXXSQTRH 525
            D ++ ASARKRLH+NYQEAQNAKK RTIQVMDIHDI              SQ RH
Sbjct: 276  DPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 330


>ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
            gi|355491578|gb|AES72781.1| hypothetical protein
            MTR_3g095380 [Medicago truncatula]
          Length = 357

 Score =  303 bits (775), Expect = 1e-79
 Identities = 175/343 (51%), Positives = 218/343 (63%), Gaps = 11/343 (3%)
 Frame = -3

Query: 1577 MDLDDLRLILRNSGVDVWSLIDTAISIASEDYSNEIRDRRDGIVERLYAQPPVVISQCQN 1398
            MDLDD R IL  +GVDVW  IDTAIS+A++D + E++ RRDGIVERLYA     I  CQN
Sbjct: 1    MDLDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQN 60

Query: 1397 CNHEDVKVSREMKEKESCS---------QEGKGGSPPTPQWINNXXXXXXXXXXEGRVYG 1245
            C+     V+ + + K+  S         + G   SPPTPQ   N           G ++ 
Sbjct: 61   CDGGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNEDGEDEEIDPYGGLF- 119

Query: 1244 RRRLMDDEQNKILDIKEQLEDPRQSEEALVSLLQELEDMDITFKVLKETDIGRHVNLLRK 1065
                 DDEQ KIL+IKE LEDP QSE+ L+ LLQ L D+DITF+ LKETDIGR+VN LRK
Sbjct: 120  -----DDEQKKILEIKELLEDPHQSEDTLMELLQNLVDIDITFQELKETDIGRNVNQLRK 174

Query: 1064 HPSSEVRRMVKNVVRKWKYRVDAWVKGSSQGETAPSTFIADGDSPLQNPPRIIQNGH-HQ 888
            HPSS+VRR+VK +V+KWK  VD WVK + Q     ST +ADGDSPLQ   +   NGH HQ
Sbjct: 175  HPSSDVRRLVKLLVKKWKEIVDDWVKQNPQ--RGKSTLMADGDSPLQ---KTTPNGHNHQ 229

Query: 887  VSDFNYSPSPNTHXXXXXXXXXXXXXXPKRKVVPRKEPQIRPSHSPQVSNSSALP-NKMK 711
            + DF YSP+P+                PK K VPRK+P  +P  SP V+  ++ P N+ +
Sbjct: 230  IPDFAYSPNPHNGSSGSDRNTSEAEPKPKPKSVPRKDPPPKPRPSPPVTAPTSAPQNRQR 289

Query: 710  EQKSTAIDAERLASARKRLHDNYQEAQNAKKNRTIQVMDIHDI 582
            EQK +  DAERLA+ARKRL  NY+EA NAKK RTIQVMDIH++
Sbjct: 290  EQKESNFDAERLAAARKRLQANYKEADNAKKQRTIQVMDIHEL 332


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c-like [Cucumis sativus]
            gi|449528150|ref|XP_004171069.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26c-like [Cucumis sativus]
          Length = 345

 Score =  299 bits (766), Expect = 1e-78
 Identities = 171/338 (50%), Positives = 220/338 (65%), Gaps = 6/338 (1%)
 Frame = -3

Query: 1577 MDLDDLRLILRNSGVDVWSLIDTAISIASEDYSNEIRDRRDGIVERLYA--QPPVVISQC 1404
            +DLDD R IL  +GVDVW+ IDTA+ +AS DY N++++RRDGIVERLYA   PP   S+C
Sbjct: 4    LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPP---SRC 60

Query: 1403 QNC----NHEDVKVSREMKEKESCSQEGKGGSPPTPQWINNXXXXXXXXXXEGRVYGRRR 1236
            +NC    NH+      E+K+    S E K  SP TPQ++             G       
Sbjct: 61   RNCDTDRNHDGRSNGCEIKQG---SGEVKEASPSTPQFVVVEGDDDGADPYAG------- 110

Query: 1235 LMDDEQNKILDIKEQLEDPRQSEEALVSLLQELEDMDITFKVLKETDIGRHVNLLRKHPS 1056
            L DDEQ K+L+IKEQLE P+Q E+ALV LLQ L DMDITF+ LKETDIGRHVN LRKHPS
Sbjct: 111  LFDDEQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPS 170

Query: 1055 SEVRRMVKNVVRKWKYRVDAWVKGSSQGETAPSTFIADGDSPLQNPPRIIQNGHHQVSDF 876
            ++VRR+VK++VRKWK  VD WV+ +  GE   +T +ADGDSP Q  P   QNG+HQV DF
Sbjct: 171  NDVRRLVKHLVRKWKEIVDEWVRLNQPGEQT-ATLLADGDSPQQKAP---QNGYHQVPDF 226

Query: 875  NYSPSPNTHXXXXXXXXXXXXXXPKRKVVPRKEPQIRPSHSPQVSNSSALPNKMKEQKST 696
             YSP+P  H              PK K VPR++   +P+     S+ +    + ++QK  
Sbjct: 227  AYSPNP--HNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEA 284

Query: 695  AIDAERLASARKRLHDNYQEAQNAKKNRTIQVMDIHDI 582
              D+++LASARKRL +NY+EA+NAK+ RTIQVMDIH+I
Sbjct: 285  NFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEI 322