BLASTX nr result

ID: Cimicifuga21_contig00000336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000336
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633154.1| PREDICTED: uncharacterized protein LOC100257...   456   e-126
emb|CBI25545.3| unnamed protein product [Vitis vinifera]              442   e-122
emb|CAN71550.1| hypothetical protein VITISV_030235 [Vitis vinifera]   436   e-120
ref|XP_002331064.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_002325189.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113

>ref|XP_003633154.1| PREDICTED: uncharacterized protein LOC100257560 [Vitis vinifera]
          Length = 400

 Score =  456 bits (1174), Expect = e-126
 Identities = 247/402 (61%), Positives = 300/402 (74%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1507 MEEARKEDNQQVLNVLEALKQASHDLYNNPTSRNNDSNSSPIKALLELETEADXXXXXXX 1328
            MEEA    N QVL VLEAL+QASH L  NPT  +++SNSS IKALLELETE++       
Sbjct: 1    MEEASDHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSLLSSDP 60

Query: 1327 XXXXXXXXXXXXXLHINKLNRSQGHSIRSFLSRRVNRYEISRVASSIETEIQAWIDRESI 1148
                           ++ L +S+GHS+ SFL+RR +   ISRVA SIE+EI+AWIDRE +
Sbjct: 61   HLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWIDRERV 120

Query: 1147 ENLVKSLREASVDEDEMVKLLTQFEKRVLQGFDLNLQDLVLKSKVFSVLESVLCNPNCSK 968
            E+L ++LRE + D+DE+VKLLTQFE RV QGF   LQDL+LKSKVFS+LESVLCNPNCSK
Sbjct: 121  EDLTRALRELA-DDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCNPNCSK 179

Query: 967  RIRERSAFAVNALVQFNKDVFVGEVLMGSTVKAXXXXXXXXXXXXXXXXXXXIKSPLVDE 788
            +IRE S FAV+AL++FNKDVFVG+VLMG TV A                   IKSPLVDE
Sbjct: 180  KIREHSGFAVSALIRFNKDVFVGQVLMGRTVLALIAMGSRSSLTVLWSLIKSIKSPLVDE 239

Query: 787  IESNGGIPKIINLLNSQEELSIMVIALDCVLEIGYFGRKEAIEAMLQVGLVKKLVELQRS 608
            IESNG IPKII+  +SQ +L I + A+DC  EIGY+GRKEAIEAML+ G+++KL+ELQRS
Sbjct: 240  IESNGEIPKIISFFSSQ-DLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLLELQRS 298

Query: 607  ELGGNLIEMDCFEDENSGVCVGGVE-KDLKGKKDSKERRFLEKHPFASCVARFAIQLEVG 431
            E+GG LIEM  F +E +     GV+ + ++  +DS+E+RFLE HPFASCVARFA+QLEVG
Sbjct: 299  EMGGILIEMGWFNEEENMKSFDGVDIEGIRRSRDSREKRFLETHPFASCVARFAVQLEVG 358

Query: 430  EGLRQREKRAFKQEIVKRVREACVSDAEAATILAEVLWGSSP 305
            EGLRQREKRAFKQEI+  VREAC SDAEAATI+AEVLWGSSP
Sbjct: 359  EGLRQREKRAFKQEILGLVREACASDAEAATIVAEVLWGSSP 400


>emb|CBI25545.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  442 bits (1138), Expect = e-122
 Identities = 244/406 (60%), Positives = 291/406 (71%)
 Frame = -3

Query: 1522 RRRAVMEEARKEDNQQVLNVLEALKQASHDLYNNPTSRNNDSNSSPIKALLELETEADXX 1343
            R +A MEEA    N QVL VLEAL+QASH L  NPT  +++SNSS IKALLELETE++  
Sbjct: 32   RGKASMEEASDHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSL 91

Query: 1342 XXXXXXXXXXXXXXXXXXLHINKLNRSQGHSIRSFLSRRVNRYEISRVASSIETEIQAWI 1163
                                ++ L +S+GHS+ SFL+RR +   ISRVA SIE+EI+AWI
Sbjct: 92   LSSDPHLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWI 151

Query: 1162 DRESIENLVKSLREASVDEDEMVKLLTQFEKRVLQGFDLNLQDLVLKSKVFSVLESVLCN 983
            DRE +E+L ++LRE + D+DE+VKLLTQFE RV QGF   LQDL+LKSKVFS+LESVLCN
Sbjct: 152  DRERVEDLTRALRELA-DDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCN 210

Query: 982  PNCSKRIRERSAFAVNALVQFNKDVFVGEVLMGSTVKAXXXXXXXXXXXXXXXXXXXIKS 803
            PNCSK+IRE S FAV+AL++FNKDVFVG+VLMG TV A                   IKS
Sbjct: 211  PNCSKKIREHSGFAVSALIRFNKDVFVGQVLMGRTVLALIAMGSRSSLTVLWSLIKSIKS 270

Query: 802  PLVDEIESNGGIPKIINLLNSQEELSIMVIALDCVLEIGYFGRKEAIEAMLQVGLVKKLV 623
            PLVDEIESNG IPKII+  +SQ +L I + A+DC  EIGY+GRKEAIEAML+ G+++KL+
Sbjct: 271  PLVDEIESNGEIPKIISFFSSQ-DLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLL 329

Query: 622  ELQRSELGGNLIEMDCFEDENSGVCVGGVEKDLKGKKDSKERRFLEKHPFASCVARFAIQ 443
            ELQRSE+GG LIEM C                       +E+RFLE HPFASCVARFA+Q
Sbjct: 330  ELQRSEMGGILIEMGC-----------------------REKRFLETHPFASCVARFAVQ 366

Query: 442  LEVGEGLRQREKRAFKQEIVKRVREACVSDAEAATILAEVLWGSSP 305
            LEVGEGLRQREKRAFKQEI+  VREAC SDAEAATI+AEVLWGSSP
Sbjct: 367  LEVGEGLRQREKRAFKQEILGLVREACASDAEAATIVAEVLWGSSP 412


>emb|CAN71550.1| hypothetical protein VITISV_030235 [Vitis vinifera]
          Length = 495

 Score =  436 bits (1121), Expect = e-120
 Identities = 238/396 (60%), Positives = 291/396 (73%), Gaps = 1/396 (0%)
 Frame = -3

Query: 1507 MEEARKEDNQQVLNVLEALKQASHDLYNNPTSRNNDSNSSPIKALLELETEADXXXXXXX 1328
            MEEA    N QVL VLEAL+QASH L  NPT  +++SNSS IKALLELETE++       
Sbjct: 1    MEEASDHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSLLSSDP 60

Query: 1327 XXXXXXXXXXXXXLHINKLNRSQGHSIRSFLSRRVNRYEISRVASSIETEIQAWIDRESI 1148
                           ++ L +S+GHS+ SFL+RR +   ISRVA SIE+EI+AWIDRE +
Sbjct: 61   HLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWIDRERV 120

Query: 1147 ENLVKSLREASVDEDEMVKLLTQFEKRVLQGFDLNLQDLVLKSKVFSVLESVLCNPNCSK 968
            E+L ++LRE + D+DE+VKLLTQFE RV QGF   LQDL+LKSKVFS+LESVLCNPNCSK
Sbjct: 121  EDLTRALRELA-DDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCNPNCSK 179

Query: 967  RIRERSAFAVNALVQFNKDVFVGEVLMGSTVKAXXXXXXXXXXXXXXXXXXXIKSPLVDE 788
            +IRE S FAV+AL++FNKDVFVG VLMG TV A                   IKSPLVDE
Sbjct: 180  KIREHSGFAVSALIRFNKDVFVGXVLMGRTVLALIAMGSRSSLTVLWSLIKSIKSPLVDE 239

Query: 787  IESNGGIPKIINLLNSQEELSIMVIALDCVLEIGYFGRKEAIEAMLQVGLVKKLVELQRS 608
            IESNG IPKII+  +SQ +L I + A+DC  EIGY+GRKEAIEAML+ G+++KL+ELQRS
Sbjct: 240  IESNGEIPKIISFFSSQ-DLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLLELQRS 298

Query: 607  ELGGNLIEMDCFEDENSGVCVGGVE-KDLKGKKDSKERRFLEKHPFASCVARFAIQLEVG 431
            E+GG LIEM  F +E +     GV+ + ++  +DS+E+RFLE HPFASCVARFA+QLEVG
Sbjct: 299  EMGGILIEMGWFNEEENMKSFDGVDIEGIRRSRDSREKRFLETHPFASCVARFAVQLEVG 358

Query: 430  EGLRQREKRAFKQEIVKRVREACVSDAEAATILAEV 323
            EGLRQREKR FKQEI+  VREAC SDAEAA I+AE+
Sbjct: 359  EGLRQREKRXFKQEILGLVREACASDAEAAXIVAEL 394


>ref|XP_002331064.1| predicted protein [Populus trichocarpa] gi|222872994|gb|EEF10125.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  421 bits (1082), Expect = e-115
 Identities = 230/397 (57%), Positives = 286/397 (72%), Gaps = 1/397 (0%)
 Frame = -3

Query: 1492 KEDNQQVLNVLEALKQASHDLYNNPTSRNNDSNSSPIKALLELETEADXXXXXXXXXXXX 1313
            KE+  +VL VLEALKQASHDL  +P   + +SNS  +KALLELETE+D            
Sbjct: 8    KEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKDPLLSTL 67

Query: 1312 XXXXXXXXLHINKLNRSQGHSIRSFLSRRVNRYEISRVASSIETEIQAWIDRESIENLVK 1133
                       + L RS GH +RSFL+RRV+   ISRVA SIE+EIQAWIDRESI+ L+K
Sbjct: 68   SEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRESIDRLMK 127

Query: 1132 SLREA-SVDEDEMVKLLTQFEKRVLQGFDLNLQDLVLKSKVFSVLESVLCNPNCSKRIRE 956
             L++   ++EDE+V LL+QFE RVLQGF+  LQDLVLKSK+F +LE + C+P+CS+++RE
Sbjct: 128  GLKDPLQIEEDELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSCSRKVRE 187

Query: 955  RSAFAVNALVQFNKDVFVGEVLMGSTVKAXXXXXXXXXXXXXXXXXXXIKSPLVDEIESN 776
            + AF V+AL++FNKDVFVG+VLMG  +                     IKSPLVDEIESN
Sbjct: 188  QCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLVDEIESN 247

Query: 775  GGIPKIINLLNSQEELSIMVIALDCVLEIGYFGRKEAIEAMLQVGLVKKLVELQRSELGG 596
            G IPKII+ L+  ++L + V+ +DC+LEIGYFGRKEAIEAML+  L+KKLVELQRS+LGG
Sbjct: 248  GEIPKIISFLD-YKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQRSKLGG 306

Query: 595  NLIEMDCFEDENSGVCVGGVEKDLKGKKDSKERRFLEKHPFASCVARFAIQLEVGEGLRQ 416
            +LI++  F+DE             +GK    E RFLE HPFASCVARFA+QLEVGEGLRQ
Sbjct: 307  DLIDIGMFDDEKE-----------RGKG---ETRFLENHPFASCVARFAVQLEVGEGLRQ 352

Query: 415  REKRAFKQEIVKRVREACVSDAEAATILAEVLWGSSP 305
            RE+RAFKQEI+K VR ACVS+AEAATI+AEVLWGSSP
Sbjct: 353  RERRAFKQEILKTVRNACVSNAEAATIVAEVLWGSSP 389


>ref|XP_002325189.1| predicted protein [Populus trichocarpa] gi|222866623|gb|EEF03754.1|
            predicted protein [Populus trichocarpa]
          Length = 557

 Score =  414 bits (1065), Expect = e-113
 Identities = 229/398 (57%), Positives = 283/398 (71%), Gaps = 1/398 (0%)
 Frame = -3

Query: 1504 EEARKEDNQQVLNVLEALKQASHDLYNNPTSRNNDSNSSPIKALLELETEADXXXXXXXX 1325
            + + KE+  +VL VLEALKQASH+L   P++   +SNS  IKALLELETE+D        
Sbjct: 3    DPSSKEEITRVLKVLEALKQASHELQTLPSTNLTESNSPAIKALLELETESDTILSKDPY 62

Query: 1324 XXXXXXXXXXXXLHINKLNRSQGHSIRSFLSRRVNRYEISRVASSIETEIQAWIDRESIE 1145
                          ++ L +   H +RSFL+RRV    ISRVA SI +EIQAWIDR+SIE
Sbjct: 63   LSALSQHLSKLKSLVDTLQKCCDHGLRSFLTRRVLIQSISRVAGSIGSEIQAWIDRKSIE 122

Query: 1144 NLVKSLREA-SVDEDEMVKLLTQFEKRVLQGFDLNLQDLVLKSKVFSVLESVLCNPNCSK 968
            +L+K L E    +ED++V LL+QFE RV QGF+  LQDLVLKSK+F +LE VLCNPNCSK
Sbjct: 123  SLIKGLNEPLQTEEDDLVSLLSQFEDRVSQGFNRELQDLVLKSKIFCLLERVLCNPNCSK 182

Query: 967  RIRERSAFAVNALVQFNKDVFVGEVLMGSTVKAXXXXXXXXXXXXXXXXXXXIKSPLVDE 788
            ++RE+ AF V+AL++FNKDVF G+VLMG  + A                   IKSPLVDE
Sbjct: 183  KVREQCAFVVSALIRFNKDVFAGQVLMGPLIHALVSMASWGSMKVLCSLIKSIKSPLVDE 242

Query: 787  IESNGGIPKIINLLNSQEELSIMVIALDCVLEIGYFGRKEAIEAMLQVGLVKKLVELQRS 608
            IESNG IPKII+ L+  ++L   V+A+DC+LEIGYFGRKEAIEAML+ GL+KKL+ELQRS
Sbjct: 243  IESNGEIPKIISFLD-YKDLHWRVVAMDCILEIGYFGRKEAIEAMLREGLIKKLMELQRS 301

Query: 607  ELGGNLIEMDCFEDENSGVCVGGVEKDLKGKKDSKERRFLEKHPFASCVARFAIQLEVGE 428
            ELG +LI+M  F+DE             +GK    E++F E HPFASCVARFA+QLEVGE
Sbjct: 302  ELGEDLIDMGMFDDEKE-----------RGKG---EKKFSESHPFASCVARFAVQLEVGE 347

Query: 427  GLRQREKRAFKQEIVKRVREACVSDAEAATILAEVLWG 314
            GLRQRE+RAFKQEI+KRVREACVSDAEAAT++AEVLWG
Sbjct: 348  GLRQRERRAFKQEILKRVREACVSDAEAATVIAEVLWG 385


Top